Mus pahari (shrew mouse): 110332286
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Entry
110332286 CDS
T05929
Symbol
Cfap52
Name
(RefSeq) cilia- and flagella-associated protein 52 isoform X1
KO
K24728
cilia- and flagella-associated protein 52
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mpah03037
]
110332286 (Cfap52)
Cilium and associated proteins [BR:
mpah03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
110332286 (Cfap52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_1st
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
WDR54
Beta-prop_VPS8
Beta-prop_NOL10_N
WD40_CFAP43
Beta-prop_WDR35_TULP_N
DUF7082
Motif
Other DBs
NCBI-GeneID:
110332286
NCBI-ProteinID:
XP_021069083
Ensembl:
MGP_PahariEiJ_G0017663
LinkDB
All DBs
Position
14:complement(35789783..35827982)
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AA seq
620 aa
AA seq
DB search
MEEQVLPELDVAELELQAVIGFNGHVPNGLKCHPDQEHLIYPLGCTVLIQAINTNEQNFL
HGHGNNVSCVSISKEGDYIASGQVTFMGFKADIILWDFKKRELIARLSLHKGKIEALAFS
PNDLYLVSLGGPDDGSVVVWSIAKRDAICGSPAAGLNVGNATSVVFSRCRDEMFVTAGNG
TIRVWELDLPNRKIWPTECQTGQMKRIVLSTGMADDDSFFYLGTTTGDILKMNPKTKLLA
DTGPVKDKFSLGVSALKCLKMGGLLVGSGAGLLIFCKSPSYKPIKKIQLQGGVTSITLRG
EGHQFFVGTEESHIYRVNFTDFKETLIATCHFEAVQDIVFPFGTAELFATCAKKDIRVWH
TMSKRELLRITVPNMTCHSIDFMRDGKSIISAWDDGKIRAFAPESGRLMYTINSAHRIGV
TAVATTSDCKRIISGGGEGEVRVWQVGCQTQKLEEALKEHKSSVSCIRVKKNNEECVTAS
TDGTCIIWDLVRLRRNQMILANTLFQCVCYHPEEFQIITSGTDRKIAYWEVFDGSVIREL
EGSLSGSINGMDITQEGGHFVTGGHDHLVKVWDYNEGEVTHVGVGHSGNIMAMRISPGNQ
YIISVSADGAILRWKYPFAS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacaagttttacctgagctggacgtagcggaactggagcttcaggctgtgatc
ggcttcaatggacacgttcccaatggtctcaaatgccatcctgaccaggagcacctgatc
taccccctgggttgcactgtcctcatccaggcaataaatactaatgagcagaatttccta
catggccatggtaacaacgtctcctgtgtgtccatctctaaggaaggagattatattgcc
tctggacaagtcacattcatgggtttcaaggcagacatcattctgtgggactttaagaag
agggaattgatcgctcggctgtcactccacaagggcaaaatcgaagccttggccttttcg
cccaatgatttgtacttggtttcacttggtggcccagatgatggaagtgtggtggtttgg
agcatagccaagagagatgccatttgcggaagccccgcggcgggcctcaatgtcggcaat
gccaccagcgtggtcttttctaggtgccgagatgagatgtttgtcactgctggaaatggg
acaattcgagtgtgggaactggatcttccgaatagaaaaatctggccaaccgagtgccaa
acgggacagatgaaaagaatagtcttgagtacgggaatggccgatgacgacagcttcttc
taccttggcaccacaaccggggatattctcaaaatgaaccccaagaccaaactgctggca
gatactgggcctgtgaaggacaaattcagcttgggagtgtcggctctcaagtgcctgaag
atgggtggtttgttggtcggctctggagctggtttgctgatcttctgtaaaagccccagc
tacaagcctatcaagaaaatccagctgcaaggtggcgtcacctctatcaccctccgcgga
gaagggcaccagttttttgtggggacagaagaatcgcacatctaccgcgttaacttcacc
gatttcaaagagactctcattgcaacttgtcactttgaagctgtccaggacatcgtcttt
ccatttggtactgctgagctgtttgctacctgtgccaagaaagacatcagggtgtggcac
accatgtccaaacgggagctgcttcggatcacggtgcccaacatgacctgccatagcatc
gacttcatgagagacgggaagagcatcatctcagcatgggatgatggaaaaatcagagcc
tttgctccagaatcaggtcggctgatgtacacaattaacagtgctcacaggatcggagtg
acggctgtcgctaccaccagtgactgtaaaaggatcatcagcggtggaggagaaggggag
gtgagggtgtggcaggtaggctgccagactcagaagctggaggaggctctgaaggagcac
aagtcctccgtgtcctgtatcagggtgaaaaagaacaatgaggagtgtgtcactgccagc
accgatgggacatgcatcatttgggaccttgtgcgacttagaaggaatcagatgatcctg
gccaacactctgttccagtgtgtttgttaccacccggaagaattccagatcatcaccagc
ggcacagacaggaagattgcttactgggaagtatttgatgggtcagtaatcagggaattg
gaaggttccctgtctgggtccatcaatggtatggatatcactcaggaaggaggacacttt
gttacaggtggtcatgaccatctggtcaaagtctgggactacaacgagggtgaagtgact
catgtcggggtgggtcacagcggcaacatcatggccatgcggataagtccaggaaaccag
tatatcatcagtgtgagcgcagacggagccatcttgaggtggaaatacccatttgcttca
tga
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