Mus pahari (shrew mouse): 110332523
Help
Entry
110332523 CDS
T05929
Symbol
Cdrt1
Name
(RefSeq) CMT1A duplicated region transcript 1 protein isoform X1
KO
K10266
F-box and WD-40 domain protein 10
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110332523 (Cdrt1)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110332523 (Cdrt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_EML
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_VPS8
NBCH_WD40
Beta-prop_IP5PC_F
F-box
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR11_2nd
F-box-like
VPS8_N
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
110332523
NCBI-ProteinID:
XP_021069449
Ensembl:
MGP_PahariEiJ_G0017629
LinkDB
All DBs
Position
14:30865473..30895908
Genome browser
AA seq
1026 aa
AA seq
DB search
MENTEPKLKQAPYFRCEKGPNWVPVCQKCEACVLAWKIFATKEWFRRVNDISQRRFLVSI
LRQLNSLYLLQYFQNILETTQGKDFIYNRSRVKLSRKGGKDKEVVKSSLNQMLDKTVERK
MKEILYWFGNSTHRTKANYTLLLLQMCDSNLLLTAANVIRVLFMKEWNSISGLHDDIPDV
MFFPEKKYSGIQDTSYVSWAVRPKPVSFPMSRHLGNKLGTETVDRETTEGKGESSLQCIQ
EMNRELFRKGGSSRLGDDPCNLLLSLDHVQRLSSGYSKYRDFIRDLPLHLSKYILRMLDK
NSLNKCIFVSQHWATLAQQVKVDQSMHSFIQNQISLLQGSYTRGIDPNYANKVSIPVPKI
VDDGKRSRSKSQKWKLRTKNDYNLWTAYQNQETQLVQMEERNVFCGTYNIRILSDTFDQN
RIIHYNGGDLMAISSNRKIHLLDIMQVKELPIEFRGHAGSVRALFLSEEDNILLSGSYDL
SIRYWDVKTGACVRIFYGHQGTITCLDVYKNRLVSGAKDGQVKEWDIETGKCLKTFKHKD
PILAAKISETYIVSSCERGIVKVWHLVTAQLQKTLTGHEGAVKCLFFNEWHLVSGGADGL
VMAWSMVGKYERCLMAFKHPKEVLQVSLLYLRVISACGDGKIRIYNFLNGNCLKVIKVDA
RGDPVLSFFYQGNRWVVGRMVAHTDSNILVFQFENVKWQYSSDKNRVKKSKDKEEEREET
SLGEEHSKSTIQGHSLKDSVSSKQDFSKSRVHPKQTRNLSSSDDMENPVGEVSHPLQKFW
KVPMTPDRFLLTINALQQAHNSEEFAYPHRPRPQVIDAWGPSIPYPRKVLTLKGKSVQHA
VDQLRSSNLPTGVKQTNIPLEIQRLQPNLKKSLHNPRVQATVPQPSLIRPKVSDSLRGDE
HLTSSIDGTMRRAGPLTSMQVIKPNRMLAPRGATATLSPKKERPRFYTTLDPLRMNTGFM
LLTMKEEKEFAEAKMKEYEASVATKEVDPGKASKAAWIRKIKGLPIDNFMKEGKTAAPEL
GQNVFI
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacacggaaccaaaactcaagcaggccccctattttcgttgtgaaaagggaccc
aactgggtccccgtgtgccagaagtgtgaagcctgtgtcttagcgtggaagatctttgcc
accaaagagtggttccggagggtcaacgacatatcccagaggagatttctagtcagcatc
ttgaggcagttaaatagcctgtatctgttacagtatttccagaatatcctagagaccacc
caggggaaggacttcatctacaacaggtctcgggtcaaactcagtaggaaggggggaaag
gataaggaggttgtaaagtcctccttgaaccagatgttggataagacggtggaacggaag
atgaaggagatcctctactggtttggcaacagcacccaccggactaaggcaaattatact
ctcttgctgctgcagatgtgtgactcaaatttactgctcactgctgccaatgtgatcaga
gtcctgttcatgaaagagtggaacagtatctcaggcctccatgatgacatccccgatgtg
atgttcttccctgagaaaaagtacagcgggatacaagacacctcatatgtctcttgggca
gttagacccaaacctgtgtcattcccaatgtccagacatttaggtaataaacttgggact
gaaactgtggacagagaaacaaccgagggaaaaggggagagttcactccagtgtatccag
gaaatgaatagagagcttttcagaaaagggggctcgtccaggctgggagatgatccgtgc
aacctgctgctgagcctggatcatgtccaacgcctgtcttctgggtacagcaaatatcgg
gactttatacgtgacctgcctctccacctctccaagtacattctaagaatgctggataag
aacagcctgaacaagtgtatctttgtaagccagcactgggccactctggcccagcaagtc
aaggtggaccagtccatgcattccttcattcagaaccagatttctctcctgcaggggtcc
tacacaaggggaatagatcctaattacgccaacaaagtctcgatcccagttcctaagata
gtggatgatgggaagcgttcacggtcaaaaagtcagaagtggaaactgagaacaaagaat
gattacaacttgtggactgcttaccagaaccaggaaacccagctggtccagatggaggag
aggaacgttttctgcggcacctacaacatccgtatcctctctgacacgtttgaccaaaac
agaatcatccactataatgggggagacctcatggccatatcatccaatcggaagatccat
ctcctggatatcatgcaggtcaaggagctgcccatcgagttccgaggccacgccggcagc
gtcagggctctcttcctgtctgaggaggacaacattctcctgagtgggagttacgatctg
agcataagatattgggatgtgaaaactggggcttgtgtacgaatcttttatggccaccag
gggacaatcacttgcctggatgtatataagaacaggcttgtatctggagcaaaagatgga
caggtgaaagaatgggacatagagacagggaagtgcctgaagacctttaaacacaaagat
cccatcttggccgccaagatcagcgagacctacattgtgagcagctgtgagcgaggcata
gtcaaggtgtggcaccttgtcacagctcagctgcaaaagactctcactgggcatgaggga
gccgtgaagtgcctgttctttaatgaatggcatctcgtctctggaggtgctgacggcctg
gtcatggcctggagcatggtgggaaagtacgaacggtgcctgatggccttcaagcatcct
aaggaggtgctgcaggtgtcgctcctctacctcagggtcatcagtgcctgtggagatggc
aagatccggatttataatttcctcaatgggaactgtctgaaggtgataaaagtcgacgcc
agaggtgaccccgtgctatccttcttttatcagggcaacaggtgggtggtaggcaggatg
gtggcccacacggacagcaacattctcgtgttccagtttgaaaatgtcaagtggcagtac
agctcagacaagaacagagtaaagaagagcaaggacaaagaggaggagagggaagagacc
agccttggggaagagcattccaagtcaaccatccaggggcacagcctgaaggactctgtg
tctagtaaacaggacttctcaaagtcccgggttcacccgaaacaaaccaggaacctatct
tcatcagatgatatggaaaatcctgtaggcgaagtcagtcatccattgcaaaagttctgg
aaagtccctatgacacctgaccgattccttctgactatcaacgccttgcaacaagcccac
aactctgaagagtttgcctatccccataggcccagacctcaagtcatcgatgcctggggg
ccttccattccatatccgaggaaagtcctaaccctcaaaggaaaatcagttcaacacgca
gttgatcagctgcgatccagcaatcttcctacaggtgtgaaacaaaccaacattcccctt
gaaatccagagacttcagcccaacttgaaaaagtccttgcacaatcccagagtccaggcc
actgtaccccagccgagtcttatccgtcctaaggtctccgacagcttaaggggtgacgag
cacttgaccagttcaattgatgggacaatgcgccgcgcaggccccctgaccagcatgcag
gtcattaaaccaaaccgaatgctcgctcctcggggcgccacagccaccctgtctcccaag
aaagaacggcctcgtttctacacaacccttgaccctctgagaatgaacactgggttcatg
ctgttgactatgaaggaggaaaaagaattcgccgaagccaagatgaaggaatatgaagcc
agtgtagccactaaagaggtcgacccaggaaaagccagcaaagctgcgtggatccgtaag
atcaaaggcctccctattgataatttcatgaaggaagggaaaacagcggcccccgaactt
ggacaaaatgtgtttatctaa
DBGET
integrated database retrieval system
