Mus pahari (shrew mouse): 110332557
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Entry
110332557 CDS
T05929
Gene name
Nr1d1
Definition
(RefSeq) nuclear receptor subfamily 1 group D member 1
KO
K03728
nuclear receptor subfamily 1 group D member 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
110332557 (Nr1d1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110332557 (Nr1d1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mpah03310
]
110332557 (Nr1d1)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110332557 (Nr1d1)
Nuclear receptors [BR:
mpah03310
]
1. Thyroid hormone like
1D. Rev-Erb
110332557 (Nr1d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
110332557
NCBI-ProteinID:
XP_021069484
Ensembl:
MGP_PahariEiJ_G0018226
LinkDB
All DBs
Position
14
AA seq
616 aa
AA seq
DB search
MTTLDSNNNTGGVITYIGSSGSSPSRTSPESLYSDSSNGSFQSLTQGCPTYFPPSPTGSL
TQDPARSFGSVPPSLNDDSSPSSASSSSSSSSSSSFYNGSPPGSLQVAMEDSSRVSPSKG
TSNITKLNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIV
RINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNLANNQLSSLCPLE
TSSTPHPTSGSMGPSPPPAPAPTPLVGFSQFPQQLTPPRSPSPEPTVEDVISQVARAHRE
IFTYAHDKLGTSPGNFNANHASGSPSATTPHRWESQGCPSAPNDNSLLAAQRHNEALNGL
RQGPSSYPPTWPSGSTHHSCHQPNSNGHRLCPTHVYSAPEGEAPANSLRQGNTKNVLLAC
PMNMYPHGRSGRTVQEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFE
VLMVRFASLFNVKDQTVMFLSRTTYSLQELGAMGMGDLLNAMFDFSEKLNSLALTEEELG
LFTAVVLVSADRSGMENSASVEQLQETLLRALRALVLKNRPSETSRFTKLLLKLPDLRTL
NNMHSEKLLSFRVDAQ
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccctggactccaacaacaacacaggcggtgttatcacctacattggctctagt
ggttcctcccccagcaggaccagcccggagtccctctacagtgacagctccaatggcagc
ttccagtccctgactcaaggttgtcctacatacttcccaccatcacccactggctccctc
acccaggaccctgcccgctcttttggcagtgtgccacccagtctcaatgatgatagctcc
ccttcttctgcatcatcgtcatcctcttcatcctcctcctcctccttctataatgggagc
cccccaggaagtctacaagtggccatggaagacagcagccgagtgtcccccagcaagggc
acgagcaacattaccaagctgaatggcatggtgctactgtgtaaggtgtgtggagacgtg
gcctcaggcttccactacggtgtgcatgcctgtgagggctgcaagggcttttttcgccgg
agcatccaacagaatatccagtacaaacggtgtctgaaaaacgagaactgctccatcgtt
cgcatcaatcgcaaccgctgccagcagtgtcgcttcaagaagtgtctctccgttggcatg
tctagagatgctgtgcgttttgggcgcatccccaagagagagaagcaacggatgcttgcg
gagatgcagagcgccatgaacttggccaacaaccaactgagcagcctgtgccctctagag
acctcgtctactccgcaccccacctccggctccatgggcccctcacctcctcctgcacca
gcccctacacctttggtgggcttctctcagttcccacaacagctgacaccacccaggtcc
cccagccctgagcccaccgtggaggatgtgatatcccaggtggcccgggcccatcgagaa
atctttacctatgcccatgacaagttaggcacctcacctggcaacttcaatgccaatcac
gcatcgggtagcccttcagctacaactccacaccgctgggagagtcagggatgcccgtct
gcccccaatgacaacagcctcttggcagctcagcgtcacaatgaagcgctgaatggtcta
cgccagggtccctcctcctaccctcctacctggccttctggctccacccaccacagctgc
caccaacctaacagcaatgggcaccgtctgtgccccacccacgtatattcggccccagaa
ggggaggcacctgccaacagtctacggcaaggcaacaccaagaatgttctgctggcatgt
cccatgaacatgtatccccatggacgcagcggccggaccgtgcaggagatctgggaagac
ttctctatgagcttcacgcctgccgtgcgggaggtggtagagtttgccaaacacatccca
ggcttccgtgacctttctcagcatgaccaggtgaccctgcttaaggccggcacctttgag
gtgctgatggtgcgctttgcatcgttgttcaacgtgaaggaccagacagtgatgttcctg
agccgcacaacctacagtctgcaggaactcggtgccatgggcatgggcgacctgctcaat
gccatgtttgacttcagtgagaagctcaactccctggcgcttaccgaggaggagctgggc
ctattcaccgcggtggtgctcgtctctgcagaccgctcgggaatggagaattccgcttcg
gtggagcagctccaggagacgctgctgcgggctcttcgggctctggtgctgaagaaccgg
ccctcggagacttcccgcttcaccaagctgctgctcaagctgccggacctgcggaccctg
aacaacatgcattccgagaagctgctgtccttccgggtggacgcccagtga
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