Mus pahari (shrew mouse): 110332637
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Entry
110332637 CDS
T05929
Symbol
Sox30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110332637 (Sox30)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110332637 (Sox30)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
110332637
NCBI-ProteinID:
XP_021069595
Ensembl:
MGP_PahariEiJ_G0017373
LinkDB
All DBs
Position
14:14431125..14464866
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AA seq
793 aa
AA seq
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MERARPEPPPPPPPPPPRQPPRPTPPRPLRPAPPAQPVEAATFRAAAAERSRSPSAQAAA
AIAAVASSCGEAAAAGAQAAGTRRLLQVKPEPVLLLPPGGPLVSPPAPDEGAVAAAAAAA
AAAAAAAASSAQARLLQLRPELLLLPPQSAAADGGPCRPELRPMQPRTLLVKAEKQELGT
GLDLSVGSRRTTEAGPRASRAAKLDGTGKALDGRRGDEKKAKLEAEEAPRDALKGGEGRS
LLAIGEGVIKTEEPDRLRDDYRLDTEATSNGLVHSSKEAILAQPTSAFGPHQQDLRFPLT
LHTVPPGARIQFQGPPPSELIRLSKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAG
IPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQK
KPYYDEAQKIKEKHREEFPGWVYQPRPGKRKRFPLSVSNVFSGATQNIISTNPTTIYPYR
SPTYSVVIPGLQNTITHPVGEAPPAIQLPTPAVQRPSPITLFQPSVSSTGSTGPVAIPPP
SLTPCPSLPPQRFSGSSQTDVHRLPSGTSRSVKRPTPGSLESTNRIPAGASTAHARFATS
PIQPPKEYASVSTCPRSTPIPPATPIPHSHVYQPPPLGHPATLFGTPPRFSFHHPYFLPG
PHYFPSSTCPYSRPPFGYGNFPSSMPECLGYYEDRYQKHEAIFSALNRDYPFRDYPDEHT
HSEDSRSCESMDGPPYYSSHGHGGEEYLNPMPPLDIGALENVFTAPASAPSGVQQVNVTD
SDEEEEEKVLRNL
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccggagccgccgcctccgccgccgccgccgccgccgcgccaaccg
ccgcggcccacccctccgcgcccgttgcgccccgctccgcccgcgcagcccgtcgaggcc
gccaccttccgggccgcggccgcagagcgctcccggtcgccgtcggctcaggccgcggcc
gccatcgccgcggtggcctcgtcgtgcggggaggccgcggcggcgggtgcgcaggcggcc
gggacgcgacgcctgctgcaggtgaagccggaaccggtgctgctgctgcctcccggagga
ccgctggtgtctcctccggctcccgacgagggcgccgtcgccgcggccgccgctgccgcc
gccgccgccgccgcggccgccgcctcgtcggcgcaggcgcgcctgctgcagctgcgaccc
gagctgctgctgttgcctccgcagtcggcggcggccgacgggggcccctgcaggccggag
ctgcgccccatgcagccccggacgctgctcgtcaaggccgagaagcaggagctggggacg
ggcttggacctgtcggtgggatctcggaggaccaccgaggccggcccgagagcctcgagg
gccgccaagttggatggcaccgggaaggccctcgacggccgccgaggcgacgagaagaaa
gccaagctggaggcagaggaggccccgagggatgcgctgaaaggcggggaaggcaggagc
ctgctggccatcggagaaggagtcatcaaaacggaggagccggacagactcagggacgat
tataggctggacacggaggccacgtccaatggcctggtccacagcagcaaggaggccatc
ctggcccagccgaccagtgcttttgggccacaccagcaagacctaaggttccctttgacg
ctccacaccgtcccgcctggagcccgtatccagtttcaggggcctccgccttctgagttg
attcggttgtccaaagtccccttgacaccagtgcctattaaaatgcagtccttgctggaa
ccttctgtaaaaattgaaaccaaagatgtccccctcaccgtgctgccctcagatgcagga
atacctgatactcccttcagtaaggacagaaatggtcatgtgaagcgacccatgaatgca
tttatggtttgggcaagaatccaccgaccagcactagccaaagctaacccagccgccaac
aatgcagaaatcagtgtccagctcgggttagagtggaacaaacttagtgaagaacaaaag
aaaccttattatgatgaagcacaaaagattaaagagaagcacagagaggaatttcctggt
tgggtttatcagcctcgtccagggaagcgaaaacgcttccctctaagtgtttccaatgta
ttttctggtgccacacagaatattatctctacaaatcccacaacaatttatccttatcgc
tcacctacctactctgtggtaattcccggccttcagaacaccatcactcatccagttggt
gaagccccgcctgccatccagctgcccacacctgcagtccagcgaccaagtcccatcaca
cttttccagcccagcgtctccagcactggcagcactggcccggtagccattccgcctcca
agcctgacgccctgcccatctctcccacctcagcgcttttctgggtcttcccaaactgac
gttcataggctcccttcgggaaccagtcgctctgtgaagagaccgactccaggctctctg
gaaagcaccaacaggattccagctggtgcaagtactgcccatgccagatttgcaacctcg
cctatccagcctcccaaggagtatgccagcgtttccacttgtccccgaagcactccgata
cccccagctactcccattccacactcccacgtctatcagcccccgccccttggccatcca
gccacactatttgggacgccacctcggttctcctttcatcacccttacttcctacctgga
cctcattacttcccttcaagcacgtgcccttatagtcgccctccctttggctatggaaat
tttccaagttcaatgccagaatgtcttggttattatgaagacagataccaaaagcatgag
gctatcttttcagctttaaatagagactatcctttcagagactatccagatgagcacaca
cacagtgaagactctcggagctgtgagagcatggacgggcccccttactacagtagccat
ggccacggtggggaagaatacttgaaccccatgcctccactggacattggagccctggag
aatgtcttcacagccccagcctcggctccctctggcgtccaacaagtcaatgtcactgac
agcgacgaggaggaagaagaaaaagtgctcaggaatttatag
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