KEGG   Mus pahari (shrew mouse): 110332637
Entry
110332637         CDS       T05929                                 
Symbol
Sox30
Name
(RefSeq) transcription factor SOX-30
  KO
K09271  transcription factor SOX15/30
Organism
mpah  Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mpah03000]
    110332637 (Sox30)
Transcription factors [BR:mpah03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    110332637 (Sox30)
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 110332637
NCBI-ProteinID: XP_021069595
Ensembl: MGP_PahariEiJ_G0017373
LinkDB
Position
14:14431125..14464866
AA seq 793 aa
MERARPEPPPPPPPPPPRQPPRPTPPRPLRPAPPAQPVEAATFRAAAAERSRSPSAQAAA
AIAAVASSCGEAAAAGAQAAGTRRLLQVKPEPVLLLPPGGPLVSPPAPDEGAVAAAAAAA
AAAAAAAASSAQARLLQLRPELLLLPPQSAAADGGPCRPELRPMQPRTLLVKAEKQELGT
GLDLSVGSRRTTEAGPRASRAAKLDGTGKALDGRRGDEKKAKLEAEEAPRDALKGGEGRS
LLAIGEGVIKTEEPDRLRDDYRLDTEATSNGLVHSSKEAILAQPTSAFGPHQQDLRFPLT
LHTVPPGARIQFQGPPPSELIRLSKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAG
IPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQK
KPYYDEAQKIKEKHREEFPGWVYQPRPGKRKRFPLSVSNVFSGATQNIISTNPTTIYPYR
SPTYSVVIPGLQNTITHPVGEAPPAIQLPTPAVQRPSPITLFQPSVSSTGSTGPVAIPPP
SLTPCPSLPPQRFSGSSQTDVHRLPSGTSRSVKRPTPGSLESTNRIPAGASTAHARFATS
PIQPPKEYASVSTCPRSTPIPPATPIPHSHVYQPPPLGHPATLFGTPPRFSFHHPYFLPG
PHYFPSSTCPYSRPPFGYGNFPSSMPECLGYYEDRYQKHEAIFSALNRDYPFRDYPDEHT
HSEDSRSCESMDGPPYYSSHGHGGEEYLNPMPPLDIGALENVFTAPASAPSGVQQVNVTD
SDEEEEEKVLRNL
NT seq 2382 nt   +upstreamnt  +downstreamnt
atggagagagccaggccggagccgccgcctccgccgccgccgccgccgccgcgccaaccg
ccgcggcccacccctccgcgcccgttgcgccccgctccgcccgcgcagcccgtcgaggcc
gccaccttccgggccgcggccgcagagcgctcccggtcgccgtcggctcaggccgcggcc
gccatcgccgcggtggcctcgtcgtgcggggaggccgcggcggcgggtgcgcaggcggcc
gggacgcgacgcctgctgcaggtgaagccggaaccggtgctgctgctgcctcccggagga
ccgctggtgtctcctccggctcccgacgagggcgccgtcgccgcggccgccgctgccgcc
gccgccgccgccgcggccgccgcctcgtcggcgcaggcgcgcctgctgcagctgcgaccc
gagctgctgctgttgcctccgcagtcggcggcggccgacgggggcccctgcaggccggag
ctgcgccccatgcagccccggacgctgctcgtcaaggccgagaagcaggagctggggacg
ggcttggacctgtcggtgggatctcggaggaccaccgaggccggcccgagagcctcgagg
gccgccaagttggatggcaccgggaaggccctcgacggccgccgaggcgacgagaagaaa
gccaagctggaggcagaggaggccccgagggatgcgctgaaaggcggggaaggcaggagc
ctgctggccatcggagaaggagtcatcaaaacggaggagccggacagactcagggacgat
tataggctggacacggaggccacgtccaatggcctggtccacagcagcaaggaggccatc
ctggcccagccgaccagtgcttttgggccacaccagcaagacctaaggttccctttgacg
ctccacaccgtcccgcctggagcccgtatccagtttcaggggcctccgccttctgagttg
attcggttgtccaaagtccccttgacaccagtgcctattaaaatgcagtccttgctggaa
ccttctgtaaaaattgaaaccaaagatgtccccctcaccgtgctgccctcagatgcagga
atacctgatactcccttcagtaaggacagaaatggtcatgtgaagcgacccatgaatgca
tttatggtttgggcaagaatccaccgaccagcactagccaaagctaacccagccgccaac
aatgcagaaatcagtgtccagctcgggttagagtggaacaaacttagtgaagaacaaaag
aaaccttattatgatgaagcacaaaagattaaagagaagcacagagaggaatttcctggt
tgggtttatcagcctcgtccagggaagcgaaaacgcttccctctaagtgtttccaatgta
ttttctggtgccacacagaatattatctctacaaatcccacaacaatttatccttatcgc
tcacctacctactctgtggtaattcccggccttcagaacaccatcactcatccagttggt
gaagccccgcctgccatccagctgcccacacctgcagtccagcgaccaagtcccatcaca
cttttccagcccagcgtctccagcactggcagcactggcccggtagccattccgcctcca
agcctgacgccctgcccatctctcccacctcagcgcttttctgggtcttcccaaactgac
gttcataggctcccttcgggaaccagtcgctctgtgaagagaccgactccaggctctctg
gaaagcaccaacaggattccagctggtgcaagtactgcccatgccagatttgcaacctcg
cctatccagcctcccaaggagtatgccagcgtttccacttgtccccgaagcactccgata
cccccagctactcccattccacactcccacgtctatcagcccccgccccttggccatcca
gccacactatttgggacgccacctcggttctcctttcatcacccttacttcctacctgga
cctcattacttcccttcaagcacgtgcccttatagtcgccctccctttggctatggaaat
tttccaagttcaatgccagaatgtcttggttattatgaagacagataccaaaagcatgag
gctatcttttcagctttaaatagagactatcctttcagagactatccagatgagcacaca
cacagtgaagactctcggagctgtgagagcatggacgggcccccttactacagtagccat
ggccacggtggggaagaatacttgaaccccatgcctccactggacattggagccctggag
aatgtcttcacagccccagcctcggctccctctggcgtccaacaagtcaatgtcactgac
agcgacgaggaggaagaagaaaaagtgctcaggaatttatag

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