Mus pahari (shrew mouse): 110332642
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Entry
110332642 CDS
T05929
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04064
NF-kappa B signaling pathway
mpah04622
RIG-I-like receptor signaling pathway
mpah05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
110332642
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
110332642
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
110332642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110332642
Enzymes [BR:
mpah01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110332642
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110332642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_4
SPRY
RING_XB3-XBAT31
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
EGF_integrin
PRY
zf-Nse
Sina_RING
DUF5797
U-box
Baculo_IE-1
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
110332642
NCBI-ProteinID:
XP_021069599
Ensembl:
MGP_PahariEiJ_G0018533
LinkDB
All DBs
Position
14:82605940..82612809
Genome browser
AA seq
624 aa
AA seq
DB search
MKQRPQRKERRRQSSVHRATKYLALMDMQKISRPAQDKPPSQLSSQPSRTLLHLLMGNNS
SQHILEDQVLCPICLEVFRNPVTTACGHNFCMTCLQSFWDHQAAIGETYYCPQCREAFSS
RPRLCKNVILGEMVACFSQAKSQTSGSLWGLAGPTDVPCDFCSPQKLRATKSCLQCVASL
CEKHLRSHFEDQLFQHHQLLDPVWDLKNRLCRKHRKLRQLYCRTEGSCVCGTCLLEEHKN
HDTTSLEDERSRKEVEVRKIQANVENQMLIIASDSQKHQGRVSFLSKLTQTMRDEVNTCF
SEILHEIKQLQMKVLDFVEKEEAAALGKLGNSIQQSHNRLLKLEEDSVWLHSLLANRSDE
QFLQEFPKLKHFPACVEPLLGTNCEETQSFLQLPETLSQLRIRLTDIGLSFINQLLLKGI
RMNSYEVLPATVDRKALLQNYCNLNFDPCTASEELFLFKETHSVLNLGILLEPSTTNSPL
PGFKQWPQVLCCPGLSEGCHYWEAEVSNSWMCLGVTYRRSPPLSGRPRRNIVYLLGRNPY
SWCLEWDSLKFSVWHNNTQTVLHGSYHHTLGVALDFGTGCLSFYGVAGDVSLLYRFLTSF
LEPLYPAVMVSSGASLTLKQYPEA
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagcggccacagagaaaggagagaagacggcaatcatcggtccacagggcaaca
aagtatctggccctcatggacatgcagaagatctcaagaccagcccaggacaaacccccc
tcacagctctcttcccagccctccagaaccctgctccatctcctgatgggcaacaacagc
agtcagcacatattggaagaccaagtcctctgtcccatttgcctggaggtgttccgcaac
ccagtcactaccgcctgtggccataacttctgcatgacttgtcttcagagtttctgggac
catcaggctgccatcggggagacttactattgtccccagtgcagagaggccttctccagc
aggccccgcctctgcaagaacgtcatcctcggggagatggtggcttgcttctcccaggcc
aagagccagacctcagggtccttgtggggcctggctggccccacagatgtgccctgtgac
ttttgctctcctcagaagctgagggcaaccaagtcatgcctgcaatgcgtggcttccttg
tgtgagaaacatcttcgcagccactttgaggatcagctgttccagcaccaccagctgttg
gacccggtgtgggacctcaagaaccgcttgtgccgcaagcatcgcaagctccggcagctg
tactgccgcacggagggcagctgtgtgtgcggaacctgcctattggaggagcacaagaac
catgataccacctccctggaggatgaacggtcccgcaaagaggtggaagttcggaagatt
caggccaacgtggagaatcagatgctaatcattgcttccgacagccagaaacaccaggga
cgagtgagttttctctcgaaactgactcagaccatgcgagatgaggtgaacacctgcttc
tcagagatcctccatgagattaaacagctgcagatgaaggtcttggattttgtggagaag
gaggaggcggccgctctgggaaagctgggcaactctatccagcaaagccacaaccgactg
ctcaagttggaggaggacagcgtctggctccacagcctgctcgccaacaggagtgatgag
cagttcctacaggagtttcccaaactgaagcactttcctgcctgcgtggaacccttgcta
ggcaccaactgtgaggagacacagagcttccttcagctgccagagaccctgtcgcagctc
cggatcaggctgacggacataggtcttagcttcatcaaccagctgctcttaaagggaatc
aggatgaactcctatgaggtactgcccgcaactgtggatagaaaggcactgctccagaat
tactgcaacctgaactttgacccctgcacggccagcgaagagctgttcttgttcaaggaa
acacactcggtgttgaacttgggcatccttttggagccctcgactaccaacagcccgtta
ccgggcttcaagcagtggccccaggttctgtgttgcccaggcctgtccgaaggctgtcac
tactgggaagctgaggtgtccaactcgtggatgtgcctgggagtcacctaccgtcgcagc
cctccgctgagcggtcgcccccgtcgcaacatcgtctacctgctgggccgcaacccctac
tcttggtgtctggagtgggactcgctcaagttctcagtgtggcacaacaacacacagacg
gtgctacacggatcctaccaccacacgctcggcgtggcgctggacttcgggaccggctgc
ctgtccttctacggcgtggcgggagacgtgagcctcctctaccgcttcctcacctccttc
ctcgaacccctgtaccccgcggtcatggtcagcagcggagcctcgctcacactcaagcag
tatcctgaggcatag
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integrated database retrieval system
