Mus pahari (shrew mouse): 110332667
Help
Entry
110332667 CDS
T05929
Symbol
Rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03030
DNA replication
mpah03420
Nucleotide excision repair
mpah03430
Mismatch repair
mpah03440
Homologous recombination
mpah03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110332667 (Rpa1)
03420 Nucleotide excision repair
110332667 (Rpa1)
03430 Mismatch repair
110332667 (Rpa1)
03440 Homologous recombination
110332667 (Rpa1)
03460 Fanconi anemia pathway
110332667 (Rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110332667 (Rpa1)
03032 DNA replication proteins [BR:
mpah03032
]
110332667 (Rpa1)
03400 DNA repair and recombination proteins [BR:
mpah03400
]
110332667 (Rpa1)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110332667 (Rpa1)
DNA replication proteins [BR:
mpah03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110332667 (Rpa1)
DNA repair and recombination proteins [BR:
mpah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110332667 (Rpa1)
MMR (mismatch excision repair)
110332667 (Rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
110332667 (Rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
110332667
NCBI-ProteinID:
XP_021069633
Ensembl:
MGP_PahariEiJ_G0017871
LinkDB
All DBs
Position
14:complement(43042993..43091392)
Genome browser
AA seq
620 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNTLVEGGQLASNCVCQVHRFIVNTLKDGRRVVILMDLQVVKSAEDVGLKIGNPVPYNE
GHGQQQQQQQQQAVPSPASAVTPPASKPQPQNGSLGMGSTAAKAYGASKPFGKPAGTGLL
QPSGATQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIR
ATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFSAVKNDYEMTFNNETSVLPCEDGHH
LPTVQFDFTGIGDLESKAKDSLVDIIGICKSYEDSTKITVKSNNREVAKRNIYLMDMSGK
VVTTTLWGEDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGW
FDSEGQALDGVSISDLRSGGAGGSNTNWKTLYEAKSENLGQGDKADYFSTVATVVFLRKE
NCMYQACPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQWVTCFQE
SAEAILGQNTMYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDV
KPVDFRDYGRRLITNIRKNM
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggtgggacacctgagcgaaggggccatcgcggccataatgcagcagggagatacatcc
ataaagcccatccttcaggtcattaacatccgtcccattactacagggaatagtccaccc
cggtatcgactgctcatgagtgatgggttgaacacgctttcctctttcatgctggccacg
cagctgaacaccctggtcgagggggggcagctggccagcaactgtgtctgccaggtccac
cggttcatcgtcaacaccctgaaggacggcaggagagtagttattttgatggacttgcaa
gttgtgaaatctgctgaagacgttggattaaagattgggaatccagtgccctataatgaa
ggacatggacagcagcagcagcagcagcagcagcaagcagtcccttccccagcctctgca
gtgacaccaccagccagcaagccccagccacagaatgggagtctaggaatgggttccact
gcagctaaggcttatggtgcctcaaagccgtttggaaaacctgccggaactggcctactg
cagccttctggtgcgacacagtccaaagtggtgcccatcgccagcctcaccccgtaccag
tcaaagtggactatttgtgcccgtgtcaccaacaaaagtcagatccgcacttggagtaat
tctcggggggaaggaaagcttttctctctagaacttgtggatgaaagcggtgaaatcaga
gctactgctttcaatgagcaggtggacaagttctttccccttattgaagtgaacaaggtg
tattacttctcaaagggcactctgaagatcgctaacaaacagttctcagctgttaaaaat
gactatgagatgaccttcaataatgagacttctgtccttccctgtgaagacggccatcac
ttacccacagttcagttcgatttcacagggattggtgacctagagagcaaggctaaagac
tcactagtagacatcattggaatctgcaagagctatgaagattcaactaaaatcacagtg
aagtcgaacaacagagaagttgctaagaggaatatctatttgatggacatgtcagggaaa
gtggtgactacaactctgtggggagaagatgctgacaagtttgacggctctcggcagccc
gtgatggccatcaaaggtgcccgagtctctgacttcggtggacggagcctctcggtcctc
tcatccagcactgtcattgtgaacccggacatccctgaggcctataagctgcgtggctgg
tttgactcagaaggacaagccttagatggtgtttccatctctgacctcaggagtggaggg
gccggagggagcaacaccaactggaaaactttgtatgaagctaaatcagagaacctgggc
cagggagacaaggcagactatttcagcactgtggcaacggtggtgtttcttcgcaaagag
aactgtatgtaccaggcctgcccaacccaggactgcaataagaaagtgattgaccagcag
aatgggttgtaccgctgtgagaagtgtgaccgggaatttcccaatttcaaataccgcatg
atcttatcggcaaatattgcagattttcaggagaaccagtgggtgacgtgtttccaggag
tctgcagaggccatccttggacagaacactatgtaccttggggaactcaaagagaagaat
gagcaggcatttgaagaggttttccagaatgccaacttccggtcctttacattcagaatc
agggtcaagctggagacctacaatgatgaatctcgaattaaggccactgtgatggacgtg
aagcccgtggacttcagagactatggcagacggctgatcacgaacatcaggaagaacatg
tga
DBGET
integrated database retrieval system
