Mus pahari (shrew mouse): 110332716
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Entry
110332716 CDS
T05929
Symbol
Hcrt
Name
(RefSeq) orexin
KO
K05246
hypocretin (orexin) neuropeptide
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04080
Neuroactive ligand-receptor interaction
mpah04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110332716 (Hcrt)
04081 Hormone signaling
110332716 (Hcrt)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
mpah04052
]
110332716 (Hcrt)
Cytokines and neuropeptides [BR:
mpah04052
]
Neuropeptides
GPCR binding
110332716 (Hcrt)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orexin
Motif
Other DBs
NCBI-GeneID:
110332716
NCBI-ProteinID:
XP_021069709
Ensembl:
MGP_PahariEiJ_G0018316
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All DBs
Position
14:complement(68220442..68222074)
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AA seq
130 aa
AA seq
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MNFPSTKVPWAAVTLLLLLLLPPALLSLGVDAQPLPDCCRQKTCSCRLYELLHGAGNHAA
GILTLGKRRPGPPGLQGRLQRLLQANGNHAAGILTMGRRAGAELEPRPCPGRGCPTITTT
ALAPRGGSGV
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgaactttccttctacaaaggttccctgggccgccgtgacgctgctgctgctgctactg
ctaccgccggcgctgctgtcgcttggtgtggacgcacagcctctgcccgactgctgtcgc
cagaagacatgttcctgccgtctctatgaactgttgcacggagctggcaaccacgctgcg
ggcatcctgactctgggaaagcggcggcctggacccccaggcctccagggacggctgcag
cgcctccttcaggccaacggtaaccacgcagctggcatcctgaccatgggccgccgcgca
ggcgcagagctagagccacgtccctgccctggtcgcggctgtccgacaataaccaccacc
gctttagcgccccggggagggtccggagtctga
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