Mus pahari (shrew mouse): 110332869
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Entry
110332869 CDS
T05929
Symbol
Sema6a
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110332869 (Sema6a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
DUF3481
Motif
Other DBs
NCBI-GeneID:
110332869
NCBI-ProteinID:
XP_021069852
Ensembl:
MGP_PahariEiJ_G0018995
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All DBs
Position
15:complement(41856916..41976112)
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AA seq
1047 aa
AA seq
DB search
MRPAALLLCLTLLHCAGAGFPEDSEPISISHGNYTKQYPVFVGHKPGRNTTQRHRLDIQM
IMIMNRTLYVAARDHIYTVDIDTSHTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLKKDDDTLFVCGTNAFNPSCRNYRVDTLETFGDEFSGMARCPYDAKHANIALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIA
VEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVT
DVIRVNGRDVVLATFSTPYNSIPGSAVCAYDMLDIANVFTGRFKEQKSPDSTWTPVPDER
VPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPLMDEAVPSIINRPWFLRTMVRYRL
TKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYD
GVEDKRIMGMQLDRASGSLYVAFSTCVIKVPLGRCERHGKCKKTCIASRDPYCGWVRESG
SCAHLSPLSRLAFEQDIERGNTDGLGDCHNSFVALNDISTPLPDYEMSFNRVYGHASSLY
PSTTTSDSASRDGYESRGGMLDWNDLLEAPGSTDPLGAVSSHNHQDKKGVIRESYLKSND
QLVPVTLLAIAVILAFVMGAVFSGIIVYCVCDHRRKDVAVVQRKEKELTHSRRGSMSSVT
KLSGLFGDTQSKDPKPEAILTPLMHNGKLATPSNTAKMLIKADQHHLDLTALPTPESTPT
LQQKRKPNRGSREWERNQNLINACTKDMPPMGSPVIPTDLPLRASPSHIPSVVVLPITQQ
GYQHEYVDQPKMSEVVAQMALEDQAATLEYKTIKEHLSSKSPNHGVNLVENLDSLPPKVP
QREASLGPPGASLSQTGLSKRLEMQHSSYGLEYKRSYPTNSLTRSHQATTLKRNNTNSSN
SSHLSRNQSFGRGDNPPPAPQRVDSIQVHSSQPSGQAVTVSRQPSLNAYNSLTRSGLKRT
PSLKPDVPPKPSFAPLSTSMKPNDACT
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgcggccagcagccttactgctgtgtctcacactgctacactgcgctggggctggtttc
ccagaagattctgagccaatcagtatttcgcatggcaactatacaaaacagtatccggtg
tttgtgggccacaagccaggacggaacaccacgcagaggcacaggctggacatccagatg
atcatgatcatgaacagaaccctctacgttgctgctcgagaccatatttatactgttgat
atagacacatcccacacagaagaaatttactgtagcaaaaaactgacatggaaatctaga
caggctgacgtagacacatgcaggatgaaggggaaacataaggatgaatgtcacaacttc
attaaagttcttctcaagaaggatgatgatacgctgtttgtctgtggaaccaatgccttc
aacccttcctgcagaaactacagggtcgatactttggaaacttttggggatgaatttagc
ggaatggccagatgcccttatgatgccaaacacgccaacatcgctctgtttgcagatgga
aaactctactcagctacagtgactgactttctggccattgatgcggtcatttacaggagc
ctcggagacagccctaccctcaggactgtcaagcacgattcaaagtggttgaaagagccg
tactttgtccaagctgtggattacggggactatatctacttcttcttcagagaaattgca
gtagaatacaacactatggggaaggttgttttccctagggtggctcaggtctgtaagaat
gacatgggagggtctcagagagtcctggaaaagcagtggacatctttcctgaaggctcgc
ctgaactgctccgtgcctggagactctcatttttatttcaatatactccaggcagttaca
gatgtgattcgcgttaatggccgtgatgttgtcttggcaaccttttccacaccttataac
agcatcccaggttctgcagtctgtgcctatgacatgcttgacattgctaatgttttcacc
gggagattcaaggaacagaaatcacctgactctacctggacaccggttccagacgagcga
gtccctaagcccaggccaggctgttgtgctggatcatcctctttagaaaaatatgcaacc
tccaatgagtttcccgatgataccctgaacttcattaagacgcatccactcatggacgag
gcagtgccttccatcatcaatagaccttggttcctgagaacgatggtcagataccgcctg
accaaaattgcagtcgacaatgctgccgggccatatcagaatcacactgtggttttcctg
ggatcagaaaagggaatcatcttgaagtttttggccaggataggaagcagtggtttccta
aatggcagccttttcctggaggagatgaatgtttacaacccagaaaagtgcagctatgat
ggtgtagaagacaaaaggatcatgggtatgcagctcgacagagcgagcggctcactctat
gttgcattctccacttgtgtgataaaggtgcctcttggccgctgtgagcgacatgggaag
tgtaaaaaaacctgcatcgcctccagagacccatactgtgggtgggtaagggaaagtggt
tcctgtgcccatctgtcaccccttagcaggctggcgtttgagcaggacattgagcgtggc
aatacagacggcctaggagactgtcacaattccttcgtggcactgaatgacatttcaact
cctctaccagattatgaaatgtctttcaacagagtgtatgggcacgccagttccctctat
cccagcaccactacgtcagattcggcatcccgagacgggtatgagtctaggggaggcatg
ctggactggaacgacctgctcgaggcacctggcagcacagaccctttgggggcagtgtcc
tctcataaccaccaggacaagaagggagtgattcgagaaagttacctcaaaagcaacgac
cagctcgttcctgtcaccctcctggccattgcagtcattctggcttttgtcatgggggcc
gtcttctcgggcatcatcgtgtactgtgtgtgcgaccacaggcgcaaagacgtggcagta
gtgcagcgcaaggagaaagagctcacccactcgcgtcggggatctatgagcagtgtcacc
aagctcagtggcctctttggggacacgcagtccaaggacccaaagcccgaggccatcctc
acaccactcatgcacaatggcaagctggccacccctagcaacacagccaagatgctcatc
aaggctgaccagcatcacctagacctcaccgccctgcccaccccagagtccaccccgacc
ctgcagcagaagcggaaacccaaccgcggcagtcgcgagtgggagaggaaccagaacctc
atcaatgcctgcaccaaggacatgcctcccatgggctcccctgtgattcccacagacctg
cccctccgggcctccccaagccacatccccagcgtggtggtcctgcccatcacgcagcag
ggctaccagcacgagtacgtagatcagcccaaaatgagcgaggtggtggctcagatggca
ctggaggaccaagctgccaccctggagtataagaccatcaaagagcacctgagcagcaag
agtcccaaccatggggtgaaccttgtggagaacctggacagcctgccccccaaagttcca
cagcgtgaagcctccctaggtcccccaggagcctcactgtcacagaccggcctgagcaag
aggctggaaatgcaacactcctcctacgggcttgagtataagaggagctatcccacgaac
tcgctcacgagaagccaccaggccaccactctcaaaagaaacaatactaactcctccaat
tcctcccacctctccaggaaccagagctttggccggggagacaacccacctcccgccccg
cagcgggtggactctatccaggtgcacagctcccagccctctggccaggccgtgactgtt
tcgaggcagcccagcctcaatgcttacaactcactgacgaggtcggggctgaagcgcacc
ccctcgctaaagccagatgtaccccccaaaccttcctttgctcccctttccacatccatg
aagcccaatgatgcgtgtacataa
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integrated database retrieval system
