KEGG   Mus pahari (shrew mouse): 110333011
Entry
110333011         CDS       T05929                                 
Symbol
Tubb6
Name
(RefSeq) tubulin beta-6 chain isoform X1
  KO
K07375  tubulin beta
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04145  Phagosome
mpah04540  Gap junction
mpah04814  Motor proteins
mpah05010  Alzheimer disease
mpah05012  Parkinson disease
mpah05014  Amyotrophic lateral sclerosis
mpah05016  Huntington disease
mpah05020  Prion disease
mpah05022  Pathways of neurodegeneration - multiple diseases
mpah05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110333011 (Tubb6)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    110333011 (Tubb6)
  09142 Cell motility
   04814 Motor proteins
    110333011 (Tubb6)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110333011 (Tubb6)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    110333011 (Tubb6)
   05012 Parkinson disease
    110333011 (Tubb6)
   05014 Amyotrophic lateral sclerosis
    110333011 (Tubb6)
   05016 Huntington disease
    110333011 (Tubb6)
   05020 Prion disease
    110333011 (Tubb6)
   05022 Pathways of neurodegeneration - multiple diseases
    110333011 (Tubb6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mpah03036]
    110333011 (Tubb6)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mpah04812]
    110333011 (Tubb6)
   04147 Exosome [BR:mpah04147]
    110333011 (Tubb6)
Chromosome and associated proteins [BR:mpah03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     110333011 (Tubb6)
Cytoskeleton proteins [BR:mpah04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    110333011 (Tubb6)
Exosome [BR:mpah04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   110333011 (Tubb6)
  Exosomal proteins of colorectal cancer cells
   110333011 (Tubb6)
  Exosomal proteins of bladder cancer cells
   110333011 (Tubb6)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 110333011
NCBI-ProteinID: XP_021070011
Ensembl: MGP_PahariEiJ_G0019096
LinkDB
Position
15:60980223..60992421
AA seq 447 aa
MREIVHIQAGQCGNQIGTKFWEVISDEHGIDQAGGYVGDSALQLERISVYYNESSSKKYV
PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVV
RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRG
LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATVNDGEEAFEDEDEEEINE
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgagggagattgtgcacatccaggcgggccagtgcgggaaccagatcggtaccaagttt
tgggaagtgatcagtgatgagcatggtatcgaccaggccggaggctacgtgggcgactca
gcgctgcagctggagaggatcagcgtctactacaatgagtcatcctctaagaagtacgta
cccagggccgccctggtggacttggagcctggcaccatggacagcgtgaggtctgggcct
tttgggcaactcttccggcctgacaacttcatcttcggacagacgggtgccgggaacaac
tgggccaagggtcactacacggagggcgcggagctggtggattcggtgctggatgtagtg
cgcaaggagtgtgagcattgcgactgtcttcagggtttccagctcacgcactcgctgggc
ggtggcacgggctcaggcatgggcacactgctcatcagcaagatccgagaggagtacccg
gaccgcatcatgaacaccttcagcgtcatgccgtcacccaaggtctcagacaccgtggtg
gagccctacaacgccacactgtcagtgcaccagctggtggagaacaccgacgagacctac
tgcatcgacaacgaggccctctacgacatctgcttccgcacactcaagctgaccacaccc
acttacggggacctcaaccacttggtatccgccaccatgagcggtgtcaccacatcactg
cgtttccctggccaactcaacgccgacctccgcaagctggctgtgaacatggtgccattc
ccacgtctccacttcttcatgcctggcttcgcccccctcacagcccggggcagccagcag
taccgtgccctgacagtacctgagctcacacagcagatgttcgatgccaagaacatgatg
gctgcctgtgacccacgccatggccgctacctgaccgtcgccactgtcttccggggcccc
atgtccatgaaggaggtggatgagcagatgctggctatccagaacaagaacagcagctac
tttgtggagtggatccccaacaacgtcaaggtagccgtgtgcgacatcccaccacggggc
ctgaagatggcctccaccttcattggcaatagcactgccatccaggagctattcaagcgc
atctcggagcagttctctgccatgttccgccgcaaggccttcctgcactggttcaccggc
gagggaatggacgagatggagttcaccgaggccgagagtaacatgaatgatctggtgtcc
gagtaccagcagtaccaggacgccacggtcaatgatggggaagaggcgtttgaagatgag
gatgaagaagagatcaacgaatag

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