Mus pahari (shrew mouse): 110333013
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Entry
110333013 CDS
T05929
Symbol
Zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah05202
Transcriptional misregulation in cancer
mpah05206
MicroRNAs in cancer
mpah05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
110333013 (Zeb1)
05206 MicroRNAs in cancer
110333013 (Zeb1)
09162 Cancer: specific types
05215 Prostate cancer
110333013 (Zeb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110333013 (Zeb1)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
110333013 (Zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2HE
Zn_SUZ12
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
110333013
NCBI-ProteinID:
XP_021070020
Ensembl:
MGP_PahariEiJ_G0018711
LinkDB
All DBs
Position
15:2194740..2365388
Genome browser
AA seq
1111 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVSNYNTVVEANSDSDDEDKLHIVEEESITDAADCEGGMPDD
ELPADQTVLPGSSDRGGGAKNCWQDDVKDNECDSDAENEQNHDPNVEEFLQQQDTAVIYP
EAPEEDQRQGTPEASGHDENGAPDAFSQLLTCPYCDRGYKRFTSLKEHIKYRHEKNEDNF
SCSLCSYTFAYRTQLERHMTSHKSGREQRHVTPSGGNRKFKCTECGKAFKYKHHLKEHLR
IHSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMPVNGRPRSGLKTSQCSSPSLSTSP
GSPTRPQIRQKIENKPLQEPLSVNQIKTEPVDYEFKPIVVASGINCSTPLQNGVFSGGGQ
LQAASAPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVAVDGNVIRQVLETNQASLASKE
QEAVSASSIQQGSHSVISAISLPLVDQDGTTKIIINYSLEQPSQLQVVPQNLKKENSAPT
NSCKSEKLPEDLTVKSETDKSFEGARDDSTCLLCEDCPGDLNALPELKHYDPERPAQPLP
PAPATEKPEPSASSAGNGDLSPSQPPLKNLLSLLKAYYALNAQPSTEELSKIADSVNLPL
DIVKKWFEKMQAGQIPGQSPEPPSPGTGSVNIPAKTEEQPQPADGNEPQEDSTRGQSPLK
IRSSPVLPVGSAINGSRSCTSSPSPLNLCSARNPQGYSCVAEGAQEEPQVEPLDLSLPKQ
QGELLERSTVSSVYQNSVYSVQEEPLNLSCAKKEPQKDSCVTDSEPVVNVVPPSANPINI
AIPTVTAQLPTIVAIADQNSVPCLRALATNKQTILIPQVAYTYSATVSPAVQEPPVKVTQ
PSGNQDERQDTSSEGVSTVEDQNDSDSTPPKKKTRKTENGMYACDLCDKIFQKSSSLLRH
KYEHTGKRPHECGICRKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHR
YSYCKRGAEDRDAMEQEDAGPEVLPEVLTTEHVGAQASPSQADSDERESLTREEDEDSEK
EEEEEDKEMEELQEGKECENPQGEEDEEEEEEEEEEEEEEEVEHEAAAKTDGTVEDKAAR
QAGSLEQKASEDEMESEVESEQLSEEKTNEA
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgcggcgcaataacgtt
tcaaattataatactgtggtagaagcaaattcagattccgatgatgaagacaaactccat
attgtggaagaagaaagtattacagatgcagctgactgtgaaggtggcatgccagatgat
gaactgccagcagaccagacagtattaccaggaagcagtgacagggggggcggtgccaag
aactgctggcaagacgatgtaaaagacaacgagtgcgactcagatgcagaaaatgagcaa
aatcatgatccgaatgtggaagagtttctgcagcaacaagacaccgccgtcatttatcct
gaggcacctgaagaagaccagcggcagggcacaccagaagccagtggtcatgacgaaaac
ggagcaccagatgcattttcccagttgctcacctgcccgtattgtgatagaggctacaag
cgctttacctctttgaaagaacacatcaagtaccgccacgagaagaatgaggacaacttc
agctgctccctgtgcagttacaccttcgcatacagaacccagcttgaacgtcatatgaca
tcgcataagtcaggaagagaacaaaggcacgtgacaccgtctgggggtaatcggaaattc
aaatgcactgaatgtgggaaagcgttcaagtacaaacaccacctgaaagagcacttacgg
attcacagtggagagaagccatatgaatgcccaaactgcaagaaacgtttttcccattct
ggctcctatagctcacacataagcagtaagaagtgtattagcttgatgcctgtgaatggt
aggcctagatcaggactcaagacatctcagtgttcctcgccatctctttcgacatcacca
ggcagtcccacacgcccacagatacgacagaagatagagaataaaccccttcaagaaccg
ctttctgtaaaccaaatcaaaactgaacctgtggattatgagttcaaacccatagtggtt
gcttcaggaatcaactgttcaacccctttacaaaatggggtttttagcggtggtggccaa
ttgcaggcagccagtgctcctcagggtgtggtgcaagctgttgttctgccaacagttggt
ttggtatctcccataagtatcaacttaagtgacattcagaatgtacttaaagtggctgta
gatggtaacgtaatacgacaagtcttggagactaatcaagcaagtcttgcatccaaagag
caagaagcagtgagtgcttcgtccatccagcagggcagccattctgtcatttctgccatc
agtcttcctttagttgatcaggatggaacgaccaaaatcatcatcaactacagtcttgag
cagcccagtcaacttcaggttgttccccagaatttaaagaaagaaaactcagcccctaca
aacagctgcaaaagtgagaagttaccagaagacctcactgtcaaatcagaaacggacaaa
agctttgaaggggccagggatgatagcacttgccttctgtgtgaggactgcccaggggac
ctcaatgcacttccagaactaaagcactatgacccagagcgccctgctcagcctctaccc
cctgccccagccaccgagaagccagagccgtctgcttcatcagctggaaatggagatttg
tctcccagtcagccacctttaaagaaccttctgtcactcttaaaagcctactatgctttg
aacgcgcagccaagcacagaagagctctcaaagattgccgattctgtgaacctaccactg
gatatagttaaaaagtggtttgaaaagatgcaagctggacagattccaggacagtctcct
gaaccaccttctcccggaacagggtcagtaaacatccctgcaaaaaccgaagagcagcct
caaccagcagatggaaatgagccccaggaggacagcacacgtggacagagtcctctcaag
ataaggagctctccagttttaccagtaggatcagccattaacggttccagaagttgcaca
tcatccccatcccctctaaacctttgctcagccaggaacccacagggttactcttgtgtg
gcagagggtgcccaggaggagccccaagtagaacctcttgatctctcactaccaaagcaa
cagggagagctactggaaaggtccacagtcagtagcgtttaccagaacagtgtttattct
gtccaggaagaacccttgaacttgtcttgtgcaaaaaaggaaccacaaaaggacagctgt
gttacagactcagaaccagttgtaaacgtagtcccaccaagtgccaaccccataaacatt
gctattcctacagtcactgcccagttacccacaatcgtggccattgctgaccagaacagt
gttccgtgtttaagggcactggccaccaacaagcagactattctgatcccccaagtggca
tatacatactcagctacagtgagccctgccgtgcaggagccgccagtgaaggtgacccag
ccaagtggaaaccaggatgaaagacaagacactagctcagaaggagtctccacggtggag
gaccagaacgactctgactccacgccacccaaaaagaaaactcggaagacagagaatgga
atgtatgcatgtgacctgtgtgacaagatatttcagaagagcagctcactgttgagacac
aagtatgagcacacaggtaagaggcctcatgaatgtggaatctgtagaaaggcatttaaa
cacaagcatcatttgattgagcatatgcggctgcactctggggaaaagccctatcaatgc
gacaagtgtggcaagcgcttctcacactcgggctcctactctcagcacatgaatcaccgc
tactcctactgcaagagaggagctgaagacagagatgccatggagcaggaagacgctggg
ccggaagtcctgccggaagtcctgacaactgagcatgttggtgctcaggcatctccctca
caggctgactcagacgagagagaaagtttgacaagggaagaggatgaagacagtgaaaag
gaggaggaagaggaagataaagagatggaagaattacaggaaggaaaggaatgtgagaac
ccacagggggaagaggacgaggaggaggaagaagaggaggaagaagaggaagaagaggag
gaagtggagcatgaggcagcagccaagactgatggtacagtggaggacaaagctgcacgg
caggcaggcagcttagagcagaaggccagtgaggacgagatggagagtgaggttgagagc
gagcaactgtctgaagagaagacaaatgaagcttag
DBGET
integrated database retrieval system
