Mus pahari (shrew mouse): 110333025
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Entry
110333025 CDS
T05929
Symbol
Ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mpah01009
]
110333025 (Ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpah03021
]
110333025 (Ctdp1)
Enzymes [BR:
mpah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
110333025 (Ctdp1)
Protein phosphatases and associated proteins [BR:
mpah01009
]
HAD phosphatases
Fcp/Scp phosphatases
110333025 (Ctdp1)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110333025 (Ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
BRCT
PTCB-BRCT
Biotin_lipoyl
BSH_CusB
LIG3_BRCT
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
110333025
NCBI-ProteinID:
XP_021070050
Ensembl:
MGP_PahariEiJ_G0019167
LinkDB
All DBs
Position
15:complement(73270199..73330932)
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AA seq
960 aa
AA seq
DB search
MEAPPAAGVPTECTPAVAGAEVRCPGPTPLRLLEWKVTAGATVRIGSVLAVCEAAASAQP
AGPAPARTASGGCVRAARAERRLRSERAGVVRELCVQPGQVVAPGALLVRLEGCSHPVVM
KGLCAECGQDLTQLQSKNGRQQVPLSTATVSMVHSVPELMVSSEQAEKLGREDQQRLHRN
RKLVLMVDLDQTLIHTTEQHCPQMSNKGIFHFQLGRGEPMLHTRLRPHCKDFLEKIAKLY
ELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCI
IDDREDVWKFAPNLITVKKYVYFPGTGDVNAPPAARESQTRKKVSHSSKGGDILEQVLSV
RDPEDGRPAPGVEQSNGLGKASRELNGGEAVPGVFPSKADEKEAWPLTRASPASSSSGHE
LTEAPELPVSCEWDGRTTPGVQPTQGDAATQDLDFDLSSDSDSSDSSSRSEGQRAPATQE
RTKAASQHSGPQDTSGGRAAASPLGESGPSIQPHDKGSDLDTQEEGERDSLCGLGNGSVD
RKEAETESQNSEQSGVTAGESLDQSVGEEEEEDTDDDDHLIHLEEILVRVHTDYYTKYDR
YLNKELEEAPDIRKIVPELKSKVLADVAVIFSGLHPTNFPVEKTREHYHATALGARVLTQ
LVLSPDAPDRATHLIAARAGTEKVRQAQECKHLHVVSPDWLWSCLERWDKVEEQLFPLID
DDTRTHRDNSPAAFPDRLSVLPTALFHPTPIHSKAHPGPEVRIYDSHTGKLIRMGPQGSA
PAPSSAPLTHGEPSSFRAVQPHQQQMFGEELPESQDGEQPGPARRKRQPSMSETMPLYTL
CKEDLESMDKEVDDILGEGSDDSDSEKKKPEDQDNEQERAPKLRKPRAPGIRREQPVGLP
SSGERSTTSMRGPRGHKRKLNEEDAASESSGESSNDDEEGSSSEADEMAAALEAELNDLM
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgccgcccgcggccggcgtccctaccgagtgcactccggcggtggccggggca
gaggtgcgctgcccgggccccacgccgctgcgtctgctggagtggaaggtgacggcgggc
gcgaccgtgcgcatcggctcggtgctggcagtgtgcgaagccgcagcctctgcgcagccc
gcagggccagccccggcccgcacggcctcagggggctgcgtgcgcgccgcgcgggccgag
cgcaggctcaggtcggagcgcgccggcgtggtccgtgaactgtgtgtgcagccaggccag
gtggtggcccctggagcacttctggtgaggttggaaggatgcagccatcctgttgtcatg
aagggtctgtgtgccgagtgtggccaggacctgacccagctgcagagtaaaaatggaagg
cagcaggtccccctttctacagcgactgtttccatggtgcacagtgtgccggagttgatg
gtgagctctgagcaagctgagaaactaggaagagaagatcagcagcgactacatcgaaac
agaaaactggttctcatggttgacttggaccagaccctgattcatacgactgagcagcac
tgtccccagatgtccaacaaaggcatcttccacttccagctgggccgaggagagcccatg
ttgcacacgcgcctgaggcctcactgcaaggacttcctggagaaaattgccaagctgtat
gagctgcacgttttcaccttcggcagccgtctgtatgcccacaccatcgcaggctttttg
gaccctgagaagaagcttttttctcatcgaatattgtctagagatgaatgtattgaccca
ttttctaaaacaggaaaccttagaaatctcttcccctgtggagactcaatggtttgcatc
attgatgaccgagaagatgtgtggaagttcgcccctaaccttataactgtgaagaagtat
gtctacttcccaggcacaggtgatgtgaatgcaccccctgcagcccgggaatctcagaca
aggaaaaaagtaagtcattcttctaagggaggggacatcttggaacaagttctgtccgtg
agggatcctgaggacggccgacctgctcccggagtggagcagagcaatggccttgggaag
gcctcccgagagctcaatggtggtgaggctgtgccgggagtttttcccagtaaagcagat
gagaaggaagcctggcccctcactcgggcctctcctgccagcagctctagtggccacgag
ctgactgaagctccagagctccctgtgtcttgtgagtgggatggtcggacaacgccaggg
gtgcagcccactcagggtgacgccgccacccaggatttggactttgacctgtccagcgac
agcgacagcagcgacagcagcagcaggtcagaaggtcagagggctccagccacccaggag
agaacaaaagcagcttcacagcacagtgggccccaggacacgagtgggggcagagctgca
gcaagccccttgggagagtctggacctagcatacagccccatgacaaagggtcagacctg
gacactcaggaggagggtgaacgggacagcctctgtggcctgggcaatggcagtgtggac
cggaaggaggctgaaacggaatcccagaacagtgagcagtcaggtgtcactgcgggcgag
tccttagaccagagtgtcggggaggaagaggaggaggacacagatgacgacgaccacttg
atccacctcgaggagatcctagtccgagtgcacactgactattataccaagtatgacaga
tacctcaacaaggagcttgaggaagctccagatatacggaaaatcgtgccagagctcaag
agcaaggtgctcgcagatgtggctgtaatattcagtgggctgcacccaacaaactttcct
gtggaaaagactcgcgagcactatcacgccacggccctgggagccagggtccttacccag
ctggtgctgagccctgatgctccagacagggccactcacctcattgcagcacgggctggt
acagagaaggtgcgccaggcacaggagtgcaaacaccttcatgtggtcagccctgattgg
ctgtggagctgcctggagcgctgggacaaggtagaggagcagctcttcccactcatagat
gacgacacccggacacatagggataacagccctgcagcctttccagacagactcagtgtg
cttccaacagccttgttccacccaacacccatccattccaaggcccatcctggtcccgag
gttcggatctatgactctcacacaggcaagctgatccggatgggcccccagggttctgca
ccagctccctccagtgccccacttacccatggagagccttcctccttcagagctgttcag
ccacatcagcagcaaatgtttggtgaagagctgccagaatctcaagatggagagcagcct
ggccctgctagaagaaagcgacaacccagtatgtcagagacaatgccgctgtacactctc
tgtaaggaggacttagagagtatggacaaagaggtcgacgacatccttggagaaggcagt
gatgacagtgacagcgagaagaagaagccagaagaccaagacaatgaacaggagagagca
ccgaagctcaggaagcccagggccccggggatccgaagagagcagcctgtagggttgccc
tcatctggcgagaggagcaccactagcatgcgtgggcccagaggccacaagaggaaactg
aatgaggaagacgctgccagcgagtccagcggggagtccagcaacgatgatgaggagggc
agcagttcggaagcagatgaaatggccgctgctctggaggcggagcttaatgacctcatg
tga
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