Mus pahari (shrew mouse): 110333165
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Entry
110333165 CDS
T05929
Name
(RefSeq) protocadherin beta-4-like
KO
K16494
protocadherin beta
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110333165
Cell adhesion molecules [BR:
mpah04515
]
Cadherins
Protocadherins
110333165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
110333165
NCBI-ProteinID:
XP_021070339
Ensembl:
MGP_PahariEiJ_G0018899
LinkDB
All DBs
Position
15:32436984..32440893
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AA seq
829 aa
AA seq
DB search
MLRFLQRRNRRPTFQSFGNSKGLVASPHFPLMEKLKKAHPKRQVMTFIFMMVLVQVCSEA
TIQYSILEETESGSFVAHLTKDLGLGAGELATRSARVVSDDYKQRLLLDPETGDLLLREK
VDREEVCSTVDPCVLHFQVTLDKPVQYFQGELLIQDINDHAPEFPEGEMLLNIPENSQPG
TLLPLNLAQDLDVGSNGLQQYTVSPNSHFHVLTRNNSXGKKYPELVQDRALDREXQAELN
LILTALDGGSPPRSGTALVRILIMDINDNAPEFVNSPYEVQVLESSPPDSPVLTVLAQDA
DTGNFGRVSYGFFQASDEIQRTFSINKVTGEIRLKKELDFEKIKFYHVKIEATDGGGLSG
KGLVIIEVLDVNDNAPELTVSSLTSSVPENAPETIISVFRVGDRDSGENGKVVCSIPENL
PFILKSTFKNFYTLVTESPLDRESRAEYNITIMVSDLGTPRLTTWHTITVQVSDINDNAP
AFTRTSYTMFVRENNSPALHIGTISATDSDSGSNAHITYSLLLPHDPELPLSSFISINAD
NGQLFALRALDYEVLQAFEFHVGATDLGSPVLSSQALVRVVVLDDNDNVPFVLYPMQNAS
APCTELLPRAAEPGYLVTKVVAVDRDSGQNSWLSFQLLKATEPGLFSVWAHNGEVRTTRM
LSERDAPKHRLLLLVKDNGDPPRSASVTLHVLLVDGFSQPYLSLPEVAPDTTQEVEDVLT
VYLVIALASVSSLFLLSVVLFVGVKLCRRAREPSLGGCSVPEELFPGHMVDVSGTGTLSH
NYQYEVCLTGDSGTGEFKFLKPMIPNLLVQDAGREVNENLHCRESFLFS
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgttaagattcctccaaagaagaaatcggcgtccaacatttcaaagctttggaaattct
aaaggattggttgcaagccctcacttccccctcatggagaagctgaagaaagctcaccca
aaaaggcaagtaatgacgtttatttttatgatggttttggttcaggtttgcagtgaggca
acaattcaatactctatcttagaggaaacagaaagtggctcctttgtagcccatctgacc
aaggatctgggtctgggagctggggagctggctaccaggtctgcacgggtggtgtctgat
gattacaagcagagattgctgctggatcctgagactggagatttgcttctgagggagaaa
gtagaccgggaggaggtgtgtagcactgtggatccttgtgtgctgcattttcaggtgact
cttgataagccagtgcaatattttcaaggagaattattgatccaggacataaatgatcat
gctccagaatttccagaaggggaaatgctattgaatataccagaaaacagccagccaggc
actctgttaccactgaatttagcccaggacttggatgtgggcagcaatgggcttcaacaa
tacacagtcagccccaactctcattttcatgtcctcactcgaaataatagtnanggcaag
aaatacccagagttggtgcaggacagagccctggacagagaggancaggcagagctgaac
ttaatcctcacagctctggatggcgggtctccgccgaggtcaggaacagccctggttcga
atcctgatcatggacatcaatgacaatgctcctgagtttgtgaacagcccctatgaggtg
caggtcctagagagcagtcctccagactccccagtccttactgtcttagcacaggatgca
gatactggcaactttggaagagtttcctatggcttcttccaagcatcagatgaaatccag
agaacgttctcaataaacaaagtcacaggagaaatacgactgaaaaaggaattggatttt
gaaaaaattaaattttaccatgtgaaaattgaggccacggatgggggagggctttctggg
aaaggcttggtaataatagaggtgttggatgtgaacgacaatgccccagagctgaccgta
tcttcactgaccagctcagtcccagaaaacgctcctgagacgatcataagcgtcttcaga
gttggagacagggattccggagaaaatggcaaagtggtttgttctattccagagaatctg
ccattcattctaaaatccactttcaagaatttctacactctggtgacagagagccctctg
gacagagagagccgagctgagtacaacatcaccattatggtctccgacctgggcacaccc
aggctcacgacatggcacaccataacagtgcaggtgtccgacatcaacgacaatgccccc
gccttcacccgaacctcctacaccatgtttgtccgcgagaacaacagccctgccctgcac
ataggcaccatcagtgccacagactcagactcaggctccaatgctcacataacctactcg
ctactgctgccccatgatccggagctgccactctcctcgttcatctccattaacgctgac
aacgggcaactgttcgcgctcagggcgctggactacgaggtcctgcaggccttcgagttc
cacgtgggtgccacagacctaggctcaccagtgctcagcagccaggcgctggtgcgcgtg
gtggtgctggacgacaatgacaatgtgcccttcgtgctctacccgatgcagaacgcctct
gcaccctgcacagagctgctgcccagggcggcagagcccggatacctggtcaccaaggtg
gtggcagtggaccgcgactctggtcagaattcctggctgtcattccaactgctcaaagcc
acggagcccgggctattcagcgtgtgggcgcacaatggcgaggttcgcaccaccaggatg
ctgagcgagcgtgatgcacccaaacacaggctgctgctgctggtcaaggacaatggagat
cccccgcgctctgccagtgtcactcttcatgtgctgctggtggatggcttttcccagccc
tacctctctctgcctgaggtggcgcctgacaccacacaggaagttgaggatgtgcttact
gtgtacctggttattgccttggcatctgtgtcttctctcttcctcttgtctgtggtgctc
ttcgtgggggtaaagctgtgcaggagggcgagggaaccctctctgggtggctgctctgtg
cccgaggaactctttcctggccacatggtggatgtcagtggcacagggaccttgtcccac
aactaccaatatgaggtgtgtctgaccggggactctgggactggtgagttcaaattcctc
aaacccatgatccccaacctgttggttcaggatgctgggagagaagttaatgaaaatctt
cactgcagggaaagcttcctatttagttaa
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