KEGG   Mus pahari (shrew mouse): 110333165
Entry
110333165         CDS       T05929                                 
Name
(RefSeq) protocadherin beta-4-like
  KO
K16494  protocadherin beta
Organism
mpah  Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mpah04515]
    110333165
Cell adhesion molecules [BR:mpah04515]
 Cadherins
  Protocadherins
   110333165
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th
Other DBs
NCBI-GeneID: 110333165
NCBI-ProteinID: XP_021070339
Ensembl: MGP_PahariEiJ_G0018899
LinkDB
Position
15:32436984..32440893
AA seq 829 aa
MLRFLQRRNRRPTFQSFGNSKGLVASPHFPLMEKLKKAHPKRQVMTFIFMMVLVQVCSEA
TIQYSILEETESGSFVAHLTKDLGLGAGELATRSARVVSDDYKQRLLLDPETGDLLLREK
VDREEVCSTVDPCVLHFQVTLDKPVQYFQGELLIQDINDHAPEFPEGEMLLNIPENSQPG
TLLPLNLAQDLDVGSNGLQQYTVSPNSHFHVLTRNNSXGKKYPELVQDRALDREXQAELN
LILTALDGGSPPRSGTALVRILIMDINDNAPEFVNSPYEVQVLESSPPDSPVLTVLAQDA
DTGNFGRVSYGFFQASDEIQRTFSINKVTGEIRLKKELDFEKIKFYHVKIEATDGGGLSG
KGLVIIEVLDVNDNAPELTVSSLTSSVPENAPETIISVFRVGDRDSGENGKVVCSIPENL
PFILKSTFKNFYTLVTESPLDRESRAEYNITIMVSDLGTPRLTTWHTITVQVSDINDNAP
AFTRTSYTMFVRENNSPALHIGTISATDSDSGSNAHITYSLLLPHDPELPLSSFISINAD
NGQLFALRALDYEVLQAFEFHVGATDLGSPVLSSQALVRVVVLDDNDNVPFVLYPMQNAS
APCTELLPRAAEPGYLVTKVVAVDRDSGQNSWLSFQLLKATEPGLFSVWAHNGEVRTTRM
LSERDAPKHRLLLLVKDNGDPPRSASVTLHVLLVDGFSQPYLSLPEVAPDTTQEVEDVLT
VYLVIALASVSSLFLLSVVLFVGVKLCRRAREPSLGGCSVPEELFPGHMVDVSGTGTLSH
NYQYEVCLTGDSGTGEFKFLKPMIPNLLVQDAGREVNENLHCRESFLFS
NT seq 2490 nt   +upstreamnt  +downstreamnt
atgttaagattcctccaaagaagaaatcggcgtccaacatttcaaagctttggaaattct
aaaggattggttgcaagccctcacttccccctcatggagaagctgaagaaagctcaccca
aaaaggcaagtaatgacgtttatttttatgatggttttggttcaggtttgcagtgaggca
acaattcaatactctatcttagaggaaacagaaagtggctcctttgtagcccatctgacc
aaggatctgggtctgggagctggggagctggctaccaggtctgcacgggtggtgtctgat
gattacaagcagagattgctgctggatcctgagactggagatttgcttctgagggagaaa
gtagaccgggaggaggtgtgtagcactgtggatccttgtgtgctgcattttcaggtgact
cttgataagccagtgcaatattttcaaggagaattattgatccaggacataaatgatcat
gctccagaatttccagaaggggaaatgctattgaatataccagaaaacagccagccaggc
actctgttaccactgaatttagcccaggacttggatgtgggcagcaatgggcttcaacaa
tacacagtcagccccaactctcattttcatgtcctcactcgaaataatagtnanggcaag
aaatacccagagttggtgcaggacagagccctggacagagaggancaggcagagctgaac
ttaatcctcacagctctggatggcgggtctccgccgaggtcaggaacagccctggttcga
atcctgatcatggacatcaatgacaatgctcctgagtttgtgaacagcccctatgaggtg
caggtcctagagagcagtcctccagactccccagtccttactgtcttagcacaggatgca
gatactggcaactttggaagagtttcctatggcttcttccaagcatcagatgaaatccag
agaacgttctcaataaacaaagtcacaggagaaatacgactgaaaaaggaattggatttt
gaaaaaattaaattttaccatgtgaaaattgaggccacggatgggggagggctttctggg
aaaggcttggtaataatagaggtgttggatgtgaacgacaatgccccagagctgaccgta
tcttcactgaccagctcagtcccagaaaacgctcctgagacgatcataagcgtcttcaga
gttggagacagggattccggagaaaatggcaaagtggtttgttctattccagagaatctg
ccattcattctaaaatccactttcaagaatttctacactctggtgacagagagccctctg
gacagagagagccgagctgagtacaacatcaccattatggtctccgacctgggcacaccc
aggctcacgacatggcacaccataacagtgcaggtgtccgacatcaacgacaatgccccc
gccttcacccgaacctcctacaccatgtttgtccgcgagaacaacagccctgccctgcac
ataggcaccatcagtgccacagactcagactcaggctccaatgctcacataacctactcg
ctactgctgccccatgatccggagctgccactctcctcgttcatctccattaacgctgac
aacgggcaactgttcgcgctcagggcgctggactacgaggtcctgcaggccttcgagttc
cacgtgggtgccacagacctaggctcaccagtgctcagcagccaggcgctggtgcgcgtg
gtggtgctggacgacaatgacaatgtgcccttcgtgctctacccgatgcagaacgcctct
gcaccctgcacagagctgctgcccagggcggcagagcccggatacctggtcaccaaggtg
gtggcagtggaccgcgactctggtcagaattcctggctgtcattccaactgctcaaagcc
acggagcccgggctattcagcgtgtgggcgcacaatggcgaggttcgcaccaccaggatg
ctgagcgagcgtgatgcacccaaacacaggctgctgctgctggtcaaggacaatggagat
cccccgcgctctgccagtgtcactcttcatgtgctgctggtggatggcttttcccagccc
tacctctctctgcctgaggtggcgcctgacaccacacaggaagttgaggatgtgcttact
gtgtacctggttattgccttggcatctgtgtcttctctcttcctcttgtctgtggtgctc
ttcgtgggggtaaagctgtgcaggagggcgagggaaccctctctgggtggctgctctgtg
cccgaggaactctttcctggccacatggtggatgtcagtggcacagggaccttgtcccac
aactaccaatatgaggtgtgtctgaccggggactctgggactggtgagttcaaattcctc
aaacccatgatccccaacctgttggttcaggatgctgggagagaagttaatgaaaatctt
cactgcagggaaagcttcctatttagttaa

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