Mus pahari (shrew mouse): 110333171
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Entry
110333171 CDS
T05929
Name
(RefSeq) protocadherin beta-4-like
KO
K16494
protocadherin beta
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110333171
Cell adhesion molecules [BR:
mpah04515
]
Cadherins
Protocadherins
110333171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
110333171
NCBI-ProteinID:
XP_021070346
Ensembl:
MGP_PahariEiJ_G0018900
LinkDB
All DBs
Position
15:32479141..32482174
Genome browser
AA seq
798 aa
AA seq
DB search
MHFLIMEKLGRIHLNRQVMTVIFMMVLVQVCSEPTIRYSILDESESGSFVAHLTKDLGLG
AGELASRSARVVSDDYKQRLLLDPETGDLLLREKVDREELCSSVDPCVLSFQVSLEKPVQ
YFQGELLIQDINDHAPEFPDQELLLKIPENSQPGMRFSLKLAQDLDVGSNGLQQYTVSPN
SHFHVLTRNNSKGKKYPELVQDRALDREEQAELSLTLTALDGGSPPRTGTALIRILIMDI
NDNAPEFVNSPYEVQILESSPPDSPILTVLARDADAGNFGRVSYGFFQASDEIQQTFSIN
ATTGDMRLKKKLDFEKIKFYHLEIEAIDGGGLSGKGSVTIEVVDVNDNVPELTMSSLTSS
VPENAPETIISIFRVGDRDSGENGKVVCSIPENMPFILKSTFKNFYTLVTEIPLDRESRA
QYNITIMVSDMGTPRLTTWHTITVQVTDINDNTPTFTQTSYTMFVRENNSPALHIGTISA
TDSDSGSNAHITYSLLLPHDPELALSSLISINADNGQLFALRALDYEALQVFEFHVGATD
GGSPALSSQALVRVVVLDDNDNVPFVLYPLQNASAPCTELLPRAAEPGYLVTKVVAVDRD
SGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLVVKDNGDPQRSAS
VTLQVLLVDGFSQPYLPLPEVAQDAAHEDEDVLTLYLVIALASVSSLFLLSVLLFVGVRL
CRRAREVSLGGCSMPGEHFPGHLVDVSGAGTLSQSYQYEVCLRGDSGTGEFKFLKPMIPN
AGIEIMESPHCRDSFVFN
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcacttcctcatcatggagaagctagggagaattcacctaaacaggcaagtaatgacg
gttatttttatgatggttttggttcaggtttgcagtgagccaacaattcgatactctatc
ttagatgaatcagaaagtggctcctttgtagcccatttgaccaaggatctgggactggga
gctggggagctggctagcaggtctgcacgggtggtgtctgatgattacaagcagagattg
ctgctggatcctgagactggagatttgcttctgagggagaaagtagaccgggaggagctg
tgtagctctgtggatccttgtgtgctgagtttccaggtgtctcttgaaaagccagtgcaa
tattttcaaggagaattattgatccaggacataaacgatcatgctccagaattcccagat
caagaactgctcttgaaaataccagaaaacagccagccaggcatgcgattttcactgaaa
ttagcccaggatttggatgtgggcagcaatgggcttcaacaatacacagtcagccccaac
tctcattttcatgtcctcactcgaaataatagtaaaggcaaaaaatacccagagttggtg
caggacagagccctggacagagaggagcaggcagagctgagcttaaccctcacagctctg
gatggagggtctccaccaaggacaggaacagctctgattcgaatccttatcatggacatc
aatgacaatgctcctgagtttgtgaacagcccctatgaggtgcagatcctagagagcagt
cccccagactccccaatcctgactgtcttagcacgggatgcagatgctggcaactttggg
agagtatcctatggcttcttccaagcatcagatgaaatccaacaaacattctcaataaat
gcaaccactggagacatgcgattgaaaaagaaattggattttgaaaaaattaaattttac
catttggaaatcgaggccatagatggaggtgggctttctggaaaaggctctgtaacgata
gaggttgtggatgtgaatgataatgtcccagagctgaccatgtcttcactgaccagctca
gtcccagaaaacgctcctgagacgatcataagcatcttcagagttggagacagggattcc
ggagagaatggaaaggtggtttgttctattccagaaaacatgccattcattctaaaatcc
accttcaagaacttctacactctggtgacagagatccctctggatagagaaagcagagct
cagtacaatatcaccatcatggtctctgacatgggcacacccaggctcacaacatggcac
accataacggtccaggtgaccgacatcaacgacaacacccccaccttcacccaaacatcc
tacaccatgtttgttcgcgaaaacaatagccccgccctgcacataggcaccatcagtgct
acagactcagactcaggctccaatgcccacatcacctattcactgctgctgccccatgat
ccggaactggccctctcttcgttaatctccattaacgctgacaatgggcaactgtttgca
ctcagggcgctggactatgaggccctgcaggtcttcgagttccacgtgggcgccacagat
ggaggctcacctgcgctcagcagccaggctctggtgcgcgtggtggtgctggatgacaat
gacaatgtgcccttcgtgctctacccgctgcagaatgcctctgctccctgcactgagctg
ctgcctagagctgcggagccaggctacctggtcaccaaggtggtggcagtggaccgcgac
tctggccagaatgcctggctatccttccagttgctcaaggccacggaaccggggctgttc
agcgtgtgggcgcacaatggagaggtgcgcaccaccaggttgttgagtgagcgtgatgtg
cccaagcacaggctgctgctggtggtcaaggacaatggagatcctcagcgctctgccagt
gtcactctacaggtgctgctggtagatggcttctcacaaccctacctacctcttccagag
gtagctcaggatgctgctcatgaagatgaggatgtgcttacattgtacctggtcattgcc
ttggcctctgtgtcttctctcttcctcctgtctgtgctgctgtttgtgggggtgaggctg
tgcaggagggctagagaggtctctctgggtggctgctctatgcctggtgaacactttcct
ggccacttggtggatgtcagtggagcagggaccctgtcccaaagctaccagtatgaggtg
tgtctgaggggcgactctgggactggtgagttcaagttcctgaaacccatgattcccaat
gctgggatagaaattatggaaagtccccactgcagggatagctttgtattcaactaa
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