Mus pahari (shrew mouse): 110333174
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Entry
110333174 CDS
T05929
Name
(RefSeq) protocadherin beta-6-like
KO
K16494
protocadherin beta
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110333174
Cell adhesion molecules [BR:
mpah04515
]
Cadherins
Protocadherins
110333174
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Motif
Other DBs
NCBI-GeneID:
110333174
NCBI-ProteinID:
XP_021070348
Ensembl:
MGP_PahariEiJ_G0018903
LinkDB
All DBs
Position
15:32522029..32524774
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AA seq
811 aa
AA seq
DB search
MKSWKGFFLWNQTTEMSHTKVWCKTRQVMVLIVSMLLWEVGSESIQYAMLEETESGTFVA
NLTKDLGLRVGELAARDARVVFKGNRQYLQLDPQTQDLVLNENLDREELCGSTEPCVLSF
RVLLKNPLQFYQAELRVIDINDHAPEFPAREMLLKISEIAPPGKIFPLKMAQDLDTGSHS
IQSYTVSDNPHFHVLTRNRSDGKKFPELVLDKALDREKQDQLRLKLTAVDGGSPPRSGTT
EIQILVLDINDNAPEFAQELYEVQVPENNPIGSLLIIVSARDLDTGPFGEVSYGLSQDED
VNEPFEINTKTGEIRLKSRLDFETFQFYHVDVEALDGGGLTGKCSLVIQVLDVNDNAPEV
ILSSLNSPIPENLPGIIVAVFSVSDADSGNNQQVMCSIDDNLPFLLRPSMENFYTLETDG
ALDRESRSEYNITITVTDMGTPRLTTQHTITVQVSDINDNAPSFTQTSYTLFVHENNSPA
LHIGTISATDSDSGSNAHITYSLLLPQDTQLALASLVSINADNGQLFALRALDYEALQAF
TFHVDATDQGSPALSSQVLVRVVVLDDNDNAPFVLYPMQNASAPCTELLPRAAEPGYLVT
KVVAVDHDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDN
GDPMRSASVTLHVLLVDGFSQPYLPLPEVAQDSIEDAENALTLYLVIALASVSSLFLLSV
VLFVGVRLCKKFRTASLGGYSVPEGHFPGHLVDVSGAGTLSQSYQYEVCLRGDTGTGEFK
LRKAINPHFPSVTSERNTEESPTLRNSFLFI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaagagctggaagggatttttcctctggaatcagacaacagagatgtctcacacaaaa
gtgtggtgcaagacaaggcaagtgatggttttgattgtatcgatgcttttgtgggaggtg
ggttcagaatcaatccagtatgctatgctggaggagacagaaagtggcacgtttgtggcc
aacctgactaaggacttgggactaagggtgggagaactggctgctcgggatgctagagtg
gttttcaaggggaacagacagtatttgcagcttgaccctcagacccaggatttggtgctt
aatgaaaacctggaccgggaggaactgtgtggctccacagagccttgtgtgctgtctttc
cgggtgttactaaaaaatcctttgcagttttatcaagctgaactgagagttatagatata
aatgaccacgccccagagtttcctgccagagaaatgctccttaaaatatcagaaatagct
ccgcctggaaagatattccctttgaaaatggcacaggacttagacactggcagccacagc
attcagagctacactgtcagtgataaccctcacttccacgtgctcactcgcaatcgcagc
gacggcaagaagttccctgagctagtgttggacaaggctttggaccgtgagaagcaagac
cagctcagactaaagctcactgcggtggatggtgggtctccgcccaggtcagggaccaca
gagattcaaatattagtcttagatataaatgacaatgcgccggaatttgctcaggagctc
tatgaggtccaagttcctgagaacaaccccattggctcattgcttattatagtttcagca
agagatttagatacaggacccttcggggaggtgtcttatggactgtctcaagatgaagat
gttaacgagccttttgaaataaacacaaagacaggagaaattcgactgaaaagcagattg
gattttgaaacattccagttttaccatgtggatgttgaggccctagatggtggtgggcta
acaggaaaatgctccttagtcatccaagtattggacgtgaatgataatgctccggaagtg
atcctgtcctcactcaacagccccatccctgaaaatttgccaggtatcatagtggcagta
ttcagtgtttcagatgcggactcaggaaataaccagcaagttatgtgttccatagatgac
aatcttccatttcttctaagaccatctatggaaaatttctatactctggaaacagatggg
gcactagacagagagagcagatctgaatacaacatcaccatcacagtcaccgacatgggc
acacctaggctcacaacccagcacaccataacagtgcaggtgtctgacatcaacgacaat
gccccttccttcacccaaacctcctacaccttgttcgtccacgagaacaacagccccgct
ctgcacataggcaccatcagtgccacagactcagactcgggctccaatgcccacatcacc
tattcactgctgctgcctcaggacacacagctggcccttgcctcgctggtctccatcaac
gcagacaacgggcaactgtttgcactcagggctctggactatgaggccctgcaggccttc
acgttccacgtggatgccacagaccaaggctctcccgcgctcagcagccaagtgctggtg
cgcgtggtggttctagacgacaatgacaatgcacccttcgtgctctacccaatgcagaac
gcctctgctccctgcacagagctgctgcccagggcggcagagcccggatacctggtcacc
aaggtggtggctgtggatcacgactctggccagaatgcctggctgtcattccagctgctc
aaggccacggagcctggactgtttagtgtgtgggcgcacaatggcgaggtgcgcaccacc
aggctgctgagcgagagagatgtgcccaagcacaggctgctgctgctggtcaaggacaat
ggcgatcccatgcgctctgccagtgtcactcttcatgtgctgctggtggatggcttctct
cagccctacctacctctccccgaggtcgcgcaggactccatagaggatgctgaaaatgcg
ctcacactatacctggttattgccttagcatctgtatcttcgcttttcctcttgtctgtg
gtgctgtttgtgggggtgaggctgtgcaagaagttcaggacggcctctctgggtggctac
tctgtgcctgagggacactttcctggccatctggtggatgtcagcggcgctgggactctt
tcccagagctaccagtatgaggtgtgtctgagaggagacactgggactggtgagttcaag
ttgcgaaaggcaattaacccccactttccttctgtgacatctgagaggaacacagaggaa
agtcctactcttcggaatagcttcctattcatctaa
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