Mus pahari (shrew mouse): 110333178
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Entry
110333178 CDS
T05929
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110333178
Cell adhesion molecules [BR:
mpah04515
]
Cadherins
Protocadherins
110333178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
LIF-R_Ig-like
Motif
Other DBs
NCBI-GeneID:
110333178
NCBI-ProteinID:
XP_021070351
Ensembl:
MGP_PahariEiJ_G0018912
LinkDB
All DBs
Position
15:32592616..32597249
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AA seq
794 aa
AA seq
DB search
MKIGREHRQRQVLLIFLLLGVARAGWESRHYFVMEETPSGTVLADLVQDLGLGVAELAAR
GAQVVSEEKESRLQLDLQTGKLILNEKLDREELCGPTEPCVTHFQVLLKKPLEIFQAELQ
VGDINDHSPEFPEREMAVKIIENSPVGTAFLLKTAQDLDVGNNSIQNYKIGTNSHFHVSI
HNRGDGRKYPELVLDKELDREEQAVFRLTLTALDGGSPPRTGTSQIRIIVLDVNDNAPEF
AQAFYRVQIPENSPSGSVVAKVSAKDLDSGTNGEVSYSLFHSSQEMSRTFELNALSGEVR
LIKTLDFETTPSYELDIEATDGGGLSGKCSVSIQVVDVNDNYPELIISSLTNPIPENSPE
TEVALFRVRDRDSGENGRTVCSIQDGVPFTLEPSFENFYRLMTDGALDREIRAEYNITIS
VTDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFILENNSPALHIGTISATDSDSGS
NAHITYSLLSAQDPQLSLTSLISLNADNGQLFALRALDYEALQGFEFHVSATDRGSLALS
SQALVRVVVLDDNDNAPFVLYPMQNXXAXCTELLPXAAEPGYLVTKVVAVDRDSGQNAWL
SFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDNGEPPRSASVTLHVVV
VDGFSQPYLPLPEVVRDPSHQEGDVLTLYLVIALASVSSLFLLSVLLFVGVRLCRRARAA
SLSGCTVPEGHFPGHLVDVSGAGTLSQSYQYEVCLTGDSQSNEFKFLKPVFSGIIDQNYG
RQPDDLSFPSVLGM
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgaagattggaagggaacacagacaaaggcaagttctgttgatctttctcttgctggga
gtggctagggcgggctgggaatcccgccattactttgtgatggaggaaacacccagcggc
actgttttggcagatctagtccaggacctagggctgggagttgcggagctagctgctcga
ggagcccaggtagtctctgaggaaaaggaatcacgcttgcagctggatctacagactggg
aagctaatcttaaatgaaaaactggaccgggaggagctgtgcggccccactgagccctgt
gtcactcatttccaagtgttactgaaaaaaccactggaaatctttcaagctgagctacaa
gtaggagacattaatgatcattctcctgagtttcctgaaagagaaatggccgtgaaaatc
atagagaatagccctgttggcactgcatttctactcaaaaccgctcaggatttggatgtg
ggaaataacagcattcagaactataagattggcaccaactctcatttccatgtttccatc
cacaaccgaggtgatgggagaaaatacccagagctggtgctggacaaagagcttgatcgc
gaggagcaggcagtgttcagattaactctgacagcgctggatggtggttctccacccagg
actggcacctcacaaatccggattattgtcttggatgtcaatgacaatgcccctgagttt
gcacaggctttctaccgggtgcaaattccagagaacagcccctccggttccgtggttgct
aaggtctctgctaaggatttagacagtgggacaaatggagaggtatcatactctcttttt
catagttctcaggaaatgagcagaacttttgagctaaacgccctgtcaggagaagttcga
ctaattaaaacactggactttgagacaacaccttcatatgaactagacatagaggcaact
gatggcgggggtctttctggaaaatgctctgtttctattcaggtggtggatgtcaatgat
aattacccagaactaattatatcatcgctcaccaatccaatcccagaaaattcaccagag
acagaggtggctctgtttcgggttcgagaccgagactctggagaaaatggaaggacagtt
tgttccatccaggatggtgttccctttacactggaaccttcctttgagaacttctataga
ctgatgacagatggagctttggacagagagatcagagctgagtacaacataactatttcc
gtcaccgacctgggcacacccaggctcacaacccagcacaccataacagtgcaggtgtcc
gatatcaacgacaacgcccccgccttcactcaaacctcctacactatgttcattctcgag
aataacagccccgccctgcacataggcaccatcagcgccacagactcagactcaggctcc
aatgcccacatcacctactcactgctgtcggcccaggacccacagctgtccctcacctcg
ctcatctccctcaatgctgacaacgggcagctattcgcgctcagggcgctggactatgag
gccctgcagggcttcgagttccacgtgagtgccacagaccgaggatcacttgcgctcagc
agccaggcgctggtgcgcgtggtggtgctggatgacaatgacaatgctcccttcgtgctc
tacccgatgcagaacnccnctgcncnctgcacngagctgctgcccagngcngcngagccc
ggatacctggtcaccaaggtggtggctgtggatcgcgactctggccagaatgcctggctg
tcattccagctgctcaaggccacggagcccgggttgttcagcgtgtgggcgcacaatggt
gaggtgcgnaccaccaggctgctgagcgagcgcgatgtgcccaagcacaggctgctgctg
ctggtcaaggacaatggagagcctccacgctctgccagtgtcacactgcacgtggtagtg
gtggatggcttctcccaaccttacctccctctgccagaggtggtgcgcgaccccagtcac
caggaaggtgatgtgctcacgctgtacctggtcattgccttggcgtctgtgtcttctctc
ttcctcctgtctgtgctgctgtttgtgggggtgaggctgtgcaggagggccagggcggcc
tctcttagtggctgtactgtgcctgaaggacactttcctggccacctggtggatgtcagt
ggggcagggaccctgtctcagagctaccagtatgaggtgtgtcttacaggagattctcag
agtaatgaattcaaattcttgaagcctgtgttttctggtattatagaccaaaactatggt
aggcaaccagatgatctgtccttcccaagtgttttaggcatgtga
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