Mus pahari (shrew mouse): 110333179
Help
Entry
110333179 CDS
T05929
Name
(RefSeq) protocadherin beta-18
KO
K16494
protocadherin beta
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110333179
Cell adhesion molecules [BR:
mpah04515
]
Cadherins
Protocadherins
110333179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
REJ
Motif
Other DBs
NCBI-GeneID:
110333179
NCBI-ProteinID:
XP_021070352
Ensembl:
MGP_PahariEiJ_G0018908
LinkDB
All DBs
Position
15:32565009..32568465
Genome browser
AA seq
792 aa
AA seq
DB search
MAARGSCISRQRQVLFLFLLWGLCLADSEFGRYSVTEETERGSFVANLAKDLGLGVEALA
AKRTRVISDDNKQHLFLDSHTGDLLTNEKLDREKLCGPTEPCMLYFQILMDNPFQIYRAE
LRIVDINDHSPIFQDKKMILKIPENTAVGTTFRLERAQDSDGGQNGIQNYTISPNTFFHI
TTRNSDEGMIYPELVLDKALDWEEQPEFSLTLTALDGGSPSRSGTSTIHILVLDINDNAP
QFPQELYEAQAPENSPVGLIVIKVTGEDVDSGANAEISYSFFDASEDVRATFQINPFSGE
ITLKALLDYEFIKSYKLNVQAVDGGGLSARCTVLVQVLDVNDNAPELIMSSLVNQVVENS
PETVLAVFRINDRDSGENGKMVCHIQENLPFLLKPSMDNFYILMTEGALDRESRAEYNIT
ITVSDLGIPRLKTQHTITVQVSDINDNAPAFNQTSYTLFVRENNSPALHIGTISATDSDS
GSNAHITYSLLPTQNPQLTLTSLVSINADNGQLFAIRALDYEALQAFEFHVGATDRGSPA
LSSQALVRVVVLDDNDNAPFVLYPMQNASAPYTELLPRTAEPGYLVTKVVAVDRDSGQNA
WLSFQLLKATEPGLFSVWAHNGEVRTTRMLSERDVPKHRLLLLVKDNGEPPRSASVTLQV
LLVDGFSQPYLPLPDVAHNPTQGEEDLLTLYLVIALASVSSLFLLSVLLFVGVRLCRRAR
AASLGGCSMPEGHFPGHLVDVSGTGTLSQSYQYEVCLMGGSSGTSDFKFLKPIYPEVHAY
SSQGNSDDNPSF
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcagccagaggatcatgcatctccagacaaaggcaagtgctatttctcttcctgctc
tggggactgtgtttggcagattctgagtttggacgttattcagtgactgaggaaacagaa
aggggatcatttgtggcgaacctagcaaaggatctggggctaggggtggaagcgctggct
gcaaagaggactagggtgatttctgatgataacaaacagcacttgtttctggattctcac
actggagatttgctcacaaacgagaaactggaccgtgagaagctgtgcggccccacagag
ccctgcatgctgtatttccaaattttaatggataacccctttcagatttaccgggctgag
ctgagaattgtggatataaatgatcactcacccatattccaggacaaaaagatgatttta
aaaataccagaaaacacagctgtggggacaacatttcgattagaaagagcacaagactca
gatggcggacagaatggcatccaaaactacaccatcagccccaacactttttttcatatt
accactcgtaacagtgatgaaggaatgatatatccagagcttgtgctagacaaagctctg
gattgggaggagcagccggagttcagtctaacactcacagcacttgatggtgggtctcca
tccaggtctgggacatccactatacatattctggttttggacatcaatgataatgcacca
cagtttccccaagaactgtatgaagcccaggctccagaaaacagtccagtgggccttatt
gtcattaaagtcaccggagaagatgtagactctggagccaatgcagaaatatcctattcg
ttttttgatgcttctgaagatgttcgagcaacctttcaaatcaatcctttctctggggaa
atcactctcaaagccttgcttgactatgagttcataaagtcctataagttaaatgtacag
gcagttgatggtgggggcctttcggcgagatgtacagttctagtgcaggttttagacgtt
aatgacaacgcccctgaactgatcatgtcatcactggtcaaccaagttgttgagaactca
cctgaaaccgtgctggcagtttttaggattaatgacagagactctggagagaatgggaaa
atggtttgccacattcaagaaaatctacctttccttttaaaaccttccatggacaatttt
tacatcctaatgacagaaggagcactggacagagagagcagagctgagtacaatatcacc
atcactgtctccgacctgggcatacccaggctcaaaacccaacacaccataacagtgcaa
gtctctgacatcaatgacaacgcccctgccttcaaccaaacctcatacaccctgtttgtc
cgcgagaacaacagccccgccctgcatataggcaccatcagtgccacagactcagactca
ggctccaatgcccacatcacctactcgctgctgccaacccaaaacccacagctgaccctc
acctcgctggtctccatcaatgctgacaacgggcaactgttcgcaatcagggctctggac
tatgaagccttacaggccttcgagttccacgtgggtgccacagaccgaggctcacccgcg
ctcagcagccaggccctggtgcgtgtggtggtgctggatgacaatgacaatgcgcccttc
gtgctttacccaatgcagaacgcttctgcgccctacaccgagctgctgcccaggaccgca
gagcccggatatctggtcaccaaggtagtggctgtggatcgcgactctggccagaatgcc
tggctgtcattccagctactcaaggccacggagcccgggttgttcagcgtgtgggctcac
aatggcgaggtgcgcaccaccaggatgctgagcgagcgcgatgtgcccaagcacaggctg
ctgctgcttgtcaaggacaatggagagcctccgcgctctgccagtgtcacactgcaggtg
ctactggtggatggcttctctcagccctacctgcctctgcctgatgtggcgcacaacccc
actcaaggggaagaggatttgctcacgctgtacctggtcattgccttggcctctgtgtct
tctctcttcctcttgtctgtgctgctgtttgtgggggtgaggctgtgcaggagggccagg
gcggcctctctggggggctgctccatgcctgagggacactttcctggacaccttgtggac
gtcagcggtacaggaacactgtcccagagctaccaatatgaggtgtgtctaatgggaggc
tcctctggaaccagtgatttcaagttcttgaaaccgatttaccctgaagttcatgcttat
agttcccaaggcaatagtgatgataatccttcattttga
DBGET
integrated database retrieval system
