Mus pahari (shrew mouse): 110333181
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Entry
110333181 CDS
T05929
Name
(RefSeq) protocadherin beta-6-like
KO
K16494
protocadherin beta
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110333181
Cell adhesion molecules [BR:
mpah04515
]
Cadherins
Protocadherins
110333181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
110333181
NCBI-ProteinID:
XP_021070355
Ensembl:
MGP_PahariEiJ_G0018895
LinkDB
All DBs
Position
15:32410557..32414281
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AA seq
784 aa
AA seq
DB search
METVLAKTSQQRQVVFLPILLLLWVSGSEAIKYSMPEETESGYLVANLAKDLGIRVGELA
AREARVHHRGNKDLLQLDAETGNLFLKETLDREVLCGATEPCVLHFQIILKNPVQFFQTE
LQLTDINDHSPEFLDTEMLLTIPESANPGTVFPLKAAQDPDMGSNAVQNYTVSPNRHFHV
ITVSRTDGRKYPELVLDRALDREEQPELTLILTALDGGTPRRSGMTTVHIKIMDINDNAP
QFVQSLYEVQVPENFPLDALLVTVSARDLDAGIYGNIAYSLFQGDGDSQPFVINEITGEI
RLSKKLDFEVTPYYNVEIAATDGGGLSGKCTVAVQVLDVNDNAPELTISTLSSPIPENSP
ETVIAVFGVFDPDSGDNGRMVCSIQNELPFLLKSTFENYYTLATERPLDRESNSEYNITI
TVSDMGTPRLTTQHTITVQVSDINDNAPTFTQTSYTMFVRENNSPALHIGTISATDSDSG
SNAHITYSLLPPQDPQLALESLISINVDNGQLFVLKALDYEALQAFEFHVGATDRGSPAL
STQTLVRVVVLDDNDNAPFVLYPLQNASVSCTELLPRAAEPGYLVTKVVAVDRDSGQNAW
LSFQLLKSTEPGLFSVWAHNGEVRTTRLLSERDAPKHRLLLLVKDNGEPQSSASVTLHVL
LVDGFSQPYLPLPEVALDPTGEEDNLTLYLVIALASVSSLFLLSVLLFVGVRLCRRAKAA
SLGGCSVPEGHFPGHLVDVSGAGTLSQSYQYEVCLSGDSGTTDFKFLKPSIPNSLIPDNY
MLNS
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggagacagtgctagcaaaaacgtcacagcaaaggcaagttgtttttcttcctatcttg
ttgcttttgtgggtgtctggttcagaggcaattaaatattccatgccagaagaaacagag
agtggctacttggtggctaacctagcaaaagatctggggatcagggttggggaactggca
gctagagaggcacgagtccatcacagaggaaacaaagacctcttgcagctggatgcagag
acgggaaatctgttcttgaaggaaacattagaccgtgaggttctgtgtggggcgacagaa
ccctgtgtgctgcacttccagatcatactgaaaaaccctgtgcagttctttcaaactgaa
ctgcagctcacagatataaatgaccactctccggagttccttgacacggaaatgctccta
acaatccctgagagcgccaatccagggactgtgtttcctctgaaggcagctcaggaccct
gacatggggagcaacgctgttcagaactacacagtcagtcccaaccgccatttccatgtc
attactgtcagtcgcacagatggcaggaaatacccagagctggtgctggacagagccctg
gatagggaggagcagccagagctcactttaatcctcactgctctggatgggggcactcca
cgcaggtctgggatgactacagttcatattaaaatcatggacatcaatgacaatgctccc
cagtttgtacaatcgctctatgaggtgcaggttcctgagaatttcccccttgatgcctta
cttgtcacggtctctgccagggatttagatgctgggatatatggcaatatagcctactct
ctgtttcaaggtgatggagactcccaaccatttgtaattaatgaaatcacaggagaaatc
cgtctaagcaaaaagttggattttgaggttactccatactataatgtggaaatcgcagcc
acggatggagggggcctttcaggaaaatgcactgtggctgttcaggtgttggatgtgaac
gataacgccccagagttgaccatctctacgctctcaagtcctatccccgaaaactcccca
gagactgtcattgctgtttttggtgtttttgacccagattctggagacaatggaaggatg
gtgtgctctattcagaacgaacttccatttcttttaaagtccacatttgagaactattat
actttagcgacagagaggccactggatagagagagcaactctgagtacaacatcaccatc
actgtttcagacatgggcacacccaggctcacaacccagcacaccataacagtacaggtg
tctgacatcaacgacaacgcccccaccttcacccaaacctcctacaccatgtttgtccgc
gagaacaacagccctgccctgcacataggcaccatcagtgccacagactcagactcaggc
tcaaatgctcacatcacctactcgctactgccgccccaggacccacagctggccctcgaa
tcgctcatctccatcaacgttgacaacgggcagctgtttgtgctcaaggcattggattat
gaggccctgcaggccttcgagttccacgtgggcgccacagatagaggttcgcccgcgctc
agcacccagactctggtgcgcgtggtggtcctggatgacaatgacaatgcgcccttcgtg
ctctacccactgcagaacgcctctgtgtcctgtactgagctgctgcccagggcggcagag
cctggctacctggtcaccaaggtggtggctgtggatcgcgactctggccagaatgcctgg
ctgtccttccagctgctcaagtccacggagcccggactgttcagcgtgtgggcgcacaat
ggtgaggtgcgcaccaccaggctgctgagtgagcgagatgcacccaaacacaggctgctg
ctgctggtcaaggacaatggagagcctcagagctctgccagtgttactcttcatgtgctt
ctggtggatggcttctctcagccctacctgcctctgccagaggtggcgctggatcctaca
ggcgaagaagataatctcacgctgtatcttgtcattgccttggcctctgtgtcttctctc
ttcctcttgtctgtgctgctgtttgtgggggtgaggctgtgcaggagggccaaggcggcc
tctctgggtggctgctctgtgcctgagggacactttcctggccacctggtggacgtcagt
ggggcggggaccctgtcccagagttaccagtatgaggtgtgtctgagtggagactctggg
actacagattttaagttcctgaagcccagcattcccaatagtctgattccggacaattac
atgttgaatagttaa
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