Mus pahari (shrew mouse): 110333184
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Entry
110333184 CDS
T05929
Name
(RefSeq) protocadherin beta-18-like
KO
K16494
protocadherin beta
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110333184
Cell adhesion molecules [BR:
mpah04515
]
Cadherins
Protocadherins
110333184
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
REJ
Motif
Other DBs
NCBI-GeneID:
110333184
NCBI-ProteinID:
XP_021070358
Ensembl:
MGP_PahariEiJ_G0018911
LinkDB
All DBs
Position
15:32588786..32592505
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AA seq
774 aa
AA seq
DB search
MEPKAGAAQHIRQVLLFFVFLEASSVLATTWRYSVPEEMETGSSIANIIKDMDVGDLAAR
GARVIFDDYQPYLRLELETGNLLLNEKLDRETLCSTSEPCILHFQVLLENPLQFFQAELL
IEDINDHTPTFLEKLIFLNISESATPGTSFQMDDAQDLDIGMNGIQNYSISPNPYFYLKL
KDSGKGRRYPELVLVRSLDREKEASISLILTAMDGGSLPRSGTVLVQVVVLDVNDNAPEF
EKTLYEVQVPENSSVDSLVIKVSATDLDSGLNGEISYLVSHISRDVQKTFEIHPISGEVH
LKTLLDFEVIQSYTINIQAIDGGGLSGKSVIIVQVTDVNDNPPEIVITSLMSSIPENGLS
EMVVAVFSLRDQDSGENGRMMCSIQDKLPFLLKPTFKSFYTLVTEHPLDRESRAEYNITI
TVSDLGTPRLTTQHTITVQVSDINDNAPTFTQTSYTMFVQENNSPAMHIGTISATDSDLG
SNAHITYSLLPPQDQRLALTSLISINADNGQLFALRALDYEALQAFEFRVGATDQGLPAL
SSQVLVHVVVLDDNDNAPFVLYPLQNASALCTELLPRAAEPGYLVTKVVAVDRDSGQNAW
LSFQLLKXTEPGXFSVWAHNGEVRTTRLLSERDVSKHRLLLVVKDNGDPPRSVSVTLHLL
VVDGFSQPYLPLPEVARDPIHVDEEALTLYLVIALASVSSLFLLSVLLFVGVRLCRRARA
ASLDGYSEPDGHFPGHLVDVSGAGTLSQTYQYEVCLTGMSDSNDIRFLKPVSQP
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggagcctaaagctggagctgctcagcatataaggcaagtgctgcttttctttgttttc
ctagaagcgtcctcggttcttgccacgacctggagatactctgtgccagaagaaatggag
actggttcctctatagcaaatataataaaagatatggatgtgggtgatctagctgcacgg
ggggccagagttatatttgatgactaccagccttatttgcggttagagctagagactggc
aacttgcttttgaatgaaaaacttgacagggagacactttgttctaccagcgaaccatgt
atattgcatttccaggtgttattggaaaatcctctgcaattttttcaggctgagcttttg
attgaagacataaatgaccatacccccacgtttctagaaaaactcatatttctaaatatc
tcagaaagtgctactccaggaacctcattccaaatggatgatgctcaggacttggatata
gggatgaatggtatccaaaactattcaataagccccaacccctatttctatcttaagtta
aaagacagtggtaaaggaagacgatatccagagctggtactggttagatctctggacaga
gaaaaggaggcttcaattagcttaatactaacagctatggatggtgggtccctgcccagg
tcagggactgtattagttcaagttgtggttctggatgtcaatgacaatgcccctgagttt
gaaaaaaccctgtatgaggtccaagtaccagagaacagttctgtggactcgctggtaatc
aaggtgtctgctacagatttggattcaggactaaatggagaaatatcttacttggtttct
catatctctagagatgtacaaaaaacattcgaaatccatccaatctctggtgaagtccat
ttgaaaacactcctagattttgaagtaattcagtcttatacaataaatattcaagcgatt
gatggtggtggtctctctggaaaatcagtcattattgttcaggtcacagatgtgaatgac
aacccaccagaaatagtcattacatctcttatgagctctatcccagagaacggtttgtca
gagatggtggtcgctgttttcagtttacgagaccaagactctggagaaaatgggagaatg
atgtgttcaattcaagacaaactccctttcctcttgaaacctactttcaaaagtttctac
actctagtaacagagcatccactggacagagagagcagagctgagtacaacatcaccatc
actgtctccgacctgggcacacccaggctcacaacccagcacaccataacagtgcaggtg
tccgacatcaacgacaacgcccctacctttacccaaacctcctacaccatgttcgtccaa
gagaacaacagcccagccatgcacataggcaccatcagtgccacagactcagatttaggc
tccaatgcccacatcacctactcactgctgccgccccaggaccagcggctggccctcacc
tcgctcatctccatcaatgctgacaacgggcagctgtttgcgctcagagctctggactat
gaagccctgcaggccttcgagttccgcgtgggtgccacggaccaaggcttgcccgcgctc
agcagccaggtgctggtgcacgtggtggtgctggatgacaatgacaatgcgcccttcgtg
ctctacccactgcagaacgcttctgcactctgcactgagctgctgcccagagcggcagag
cccggatacctggtcaccaaggtggtggctgtggatcgcgactctggccagaatgcctgg
ctgtcnttccagctgctcaagnccacggagcccggnntgttcagcgtgtgggcncacaat
ggngaggtgcgnaccaccaggctgctgagcgagcgcgatgtgtccaagcacaggctgctg
ctggtggtcaaggacaatggcgatcctccgcgctctgtcagcgtcacgctgcacctgttg
gtggtggatggcttctcccagccctacctgcctctgccagaggtggcgcgcgaccctatc
cacgtggatgaggaagcgctcacactctacttggtcattgccttggcgtctgtgtcttca
ctcttcctcttgtctgtgctgctgttcgtgggggtgaggctgtgcaggagggccagagcg
gcctctctggatggctactctgagcctgatggacactttcctggccacctggtggatgtc
agcggcgcggggaccctgtcccagacctaccaatatgaggtgtgtctgacaggaatgtcg
gattccaatgatattcggttcctaaagcctgtttcccaaccttga
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