Mus pahari (shrew mouse): 110333206
Help
Entry
110333206 CDS
T05929
Symbol
Dsc1
Name
(RefSeq) desmocollin-1 isoform X1
KO
K07600
desmocollin 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110333206 (Dsc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110333206 (Dsc1)
Cell adhesion molecules [BR:
mpah04515
]
Cadherins
Major cadherins
110333206 (Dsc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
Cadherin_2
CADH_Y-type_LIR
Fibulin_C
DUF5707
Motif
Other DBs
NCBI-GeneID:
110333206
NCBI-ProteinID:
XP_021070384
Ensembl:
MGP_PahariEiJ_G0018760
LinkDB
All DBs
Position
15:complement(15840023..15871978)
Genome browser
AA seq
886 aa
AA seq
DB search
MAVACAAPGSTFSKQLLFFLLVLVLFCDACQKVSLQVPSHLKAEAPIGKVNLEECLKSPS
LILSSDPAFRILEDGTIYTTHDLLLSSEKREFSILLSDGQGQEQKKLEVVLSAKEKKVFR
KRHTEEPVHKRSKRRWAPIPCSLMENSLGPFPQHIQQIQSDAAQNYTIFYSISGPGVDKE
PFNLFYIEKDTGDIYCTRSIDREQYDQFLVYGYATTADGYAPDYPLPLLFIVEDDNDNAP
YFENKLTVFSVPENCRSGTSVGQVTAIDRDEPGTLHTRLKYRILQQIPDQPKHFAIHPDT
GVITTTTPLLDREKCDTYKLVMEVRDMGGQPFGLFTTGTITISLEDENDNSPYFTQTSYT
TEVEENRIDVEILRMTVQDQDLPNTPHSKAVYTILKGNENGNFKITTDPNTNEGVLCVVK
PLNYEVSRQVTLQIGVLNEAQFTNAANAQPPTMCTTTVTVKIKDSDEGPECRPPVKVIQS
KDGLPAGQELRGYKAMDPESSSGEGLRYQMVGDEDNWFEINESTGDLRTVKVLDRESKFV
KNNQYNISIVATDAVGRSCTGTLVVLLEDFNDHPPQIDKEVTICQQEKDFAVLEPIDLDG
PDNGPPFQFLLDNSSSRLWTLESQDGKRAILRQRHNLNYNYYSVPIQIQDRHGFSAKHVL
SVRVCDCTTPEECRMGVKEERDAKPNVILGKWAILAMVLGSALLLCILFTCFCVTTTKRT
VKKCFPDDVAQQNLIVSNTEGPGEEVTEANIRLPTQTANVCDTSTSVGTLGGQGIKTQQS
FEMVKGGHTLESHKEVVLGAADPCRYAYTGWQTFTKPRLGEKVYLCGQAEEHKHCEDYVR
PYNYEGKGSMAGSVGCCSDRQEEEGLEFLDQLEPKFRTLAKTCVKK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggcctgtgctgccccagggagcaccttctctaagcagctccttttctttctc
ctggttctggtattattttgtgatgcctgtcaaaaagtttcccttcaagttccctctcat
cttaaagctgaagcacctataggcaaagtgaatctggaagagtgtctcaaatcacccagc
ctgatcctgtccagtgacccagccttcagaattctagaagatggcacaatttacacaaca
catgacctgcttttgtcttctgaaaagagggagttctccatcttgctctcagatggtcaa
gggcaggaacaaaagaagctagaagttgtactgtcagcaaaagaaaaaaaggtttttagg
aaaagacataccgaagaaccagtgcacaagcgcagtaagagaagatgggctcctattcca
tgttcactgatggagaactcattgggtccatttccacaacacattcagcagatccaatct
gatgctgcccagaattatactatattttactctatcagtggaccaggagtagacaaagag
cctttcaatttgttctacatagagaaagacactggggacatctattgtaccagaagcatt
gaccgtgaacagtatgaccaatttttggtgtatggatatgcaacgactgctgatggctat
gcaccagactaccctcttcccctgctgtttatagttgaagatgacaatgacaatgcccca
tattttgaaaacaaattgacagtttttagtgtgcctgaaaattgccgatctggaacttca
gtgggacaagtgactgccatagacagggatgagccaggaaccctacatactcgtctgaag
tacagaatcttacaacaaatcccagatcagccaaagcacttcgccatccacccagacaca
ggtgtgatcactaccaccacacctttactggacagagagaaatgtgatacttacaagcta
gtgatggaagtacgagacatggggggccagcccttcggtctgttcaccacaggcacaatc
accatctcactggaggacgagaatgacaactcaccatacttcacccaaacttcttatact
acagaagtagaagaaaacagaattgatgttgagattctgagaatgacggtgcaagaccaa
gatttgcccaacaccccccactcgaaggcggtatacacaattctaaaggggaatgaaaac
ggaaacttcaaaattacaacagatccaaatacaaatgaaggggtcttgtgtgttgtcaag
ccattgaactatgaagtcagccgccaagtcactctgcaaattggtgtccttaatgaagcc
cagttcactaatgctgccaacgcacaacccccaacaatgtgcaccaccactgtcactgtg
aaaattaaagacagcgatgagggccctgagtgccggccaccagtcaaagtcattcagagc
aaagatggactgccagcgggccaagagctccggggctacaaagcgatggacccagagtca
agcagtggggaaggcttaaggtatcagatggtaggagatgaagataactggtttgagatt
aacgaaagcaccggagacttgagaactgtgaaagtactggacagagagtcgaagtttgtg
aaaaacaaccaatacaatatttcaatagtggcgacggatgcagttggccgatcttgcaca
ggaacactggtagttcttctggaagattttaatgaccacccaccacagattgacaaggaa
gtgaccatttgtcagcaggagaaggattttgctgttttggaacctatagatctagatggg
ccggataatggtccaccttttcagttccttctggataattcttccagcagactttggact
ctagaatcacaggatggtaaacgtgccattcttcgtcaacgacacaatcttaattataac
tattattctgtgccaatccaaatacaagacaggcatggtttttctgcaaaacatgtatta
tcagtgcgagtgtgtgactgtacaactccagaagaatgtagaatgggtgttaaggaggag
agggatgctaaaccaaatgtaatccttgggaaatgggccattctcgccatggtcctgggc
tctgcattgctactgtgcattttgtttacatgcttctgtgtgaccactaccaagagaaca
gtcaagaaatgcttcccagatgatgtagcccagcaaaatttaattgtatcaaatactgaa
ggaccaggagaagaagtgacggaagcaaatattagactccccacacagactgccaatgtt
tgtgatacaagcacatctgttgggactcttggtggtcaaggaatcaaaacacagcaaagt
tttgagatggtcaaaggaggccacaccttggagtcccacaaggaagttgtactaggagca
gcagacccttgccgatatgcttacaccggctggcaaactttcactaaacctcgccttggt
gaaaaggtgtatttgtgtgggcaagctgaggaacacaagcattgtgaagactacgttcgc
ccatataactatgaaggcaaaggttccatggctggctctgtgggctgctgcagtgatcgg
caggaggaagaagggctagagtttttagatcaattggaaccgaaatttaggacattagca
aagacatgtgtgaagaaataa
DBGET
integrated database retrieval system
