Mus pahari (shrew mouse): 110333347
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Entry
110333347 CDS
T05929
Symbol
Taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4B isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03022
Basal transcription factors
mpah05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110333347 (Taf4b)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
110333347 (Taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpah03021
]
110333347 (Taf4b)
03036 Chromosome and associated proteins [BR:
mpah03036
]
110333347 (Taf4b)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110333347 (Taf4b)
Coactivators
SAGA/TFTC/STAGA complex
110333347 (Taf4b)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110333347 (Taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
110333347
NCBI-ProteinID:
XP_021070600
Ensembl:
MGP_PahariEiJ_G0018752
LinkDB
All DBs
Position
15:11006587..11107042
Genome browser
AA seq
860 aa
AA seq
DB search
MPAGLTEPAGAAAPVVSSASGAVTMAPVAALPVRVESTPVALGPVTKAPVSVCVESVAPQ
PLPAPVGTLVTKVVPVTALPKLGSPRLPAPQIVTVKTPGTTTIQLPANLQLPPGTVLIKS
NSGQLMLVSPQQAVTGAKTTSNITPRPAVPANTQTVKICTVPNSSSQLMKKVTVAPVKNL
TQIGTTVATTASSTSSGQPVAVPSSAVTVTPAKPVNTVSILKSSSLGVLSTPSNDSSLKA
ETSVAAQTGLPATVLENVKKCKNFLSMLIKLACSGSQSPEMGQNVKKLVEQLLDAEIEAE
EFTRKLYIELKSAPQPHLVPFLKKSVVALRQLLPNSQSFIENCVKEVSGDVVISSCTMTT
ATSPVVTSTVSPALVSGATTPRTLSVQQTLNPLTGPGVANTGVVTLHSVAPAAATGGTSA
ATVLLQTSKPLTTSVPNTVAAVSLQPENPAVSGAAVALAVPSATFGETSTTPLCLPSVKP
AITSAGTKADKPAIGTPVQIMTQPSPLLPQAAGIPQAAKVKQVFSLFQVVQQPSGSSVNH
VTSISYSSPLSTQNCGQKTPVNAVMPTSKFTTSSIIKQITLPANKLLSLQAQTSSIQNNK
IKENGPACFRGEDDINDVTFMAEVNLDEENACILATHSEFVGTLIQSCKEEPFLVIGALQ
KRILDIGKKHDITELNSDAVNLISHATQERLRGLLEKLTTIAQHRMTIYKGSENYILSTD
TRSQLKFLEKLDQLEKQRKDLEEREMLLKAAKSRSNKEDPEQLRLKQKAKELQQLELAQI
QYRDANLTALAAIGPRKKRPLESGNESFKDNPSTSGTSSLTATKPCRPRITRICLRDLIF
CMEQEREMKYSRALYLALLK
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgggcctcacggagccggccggcgccgctgctcctgtggtctcgagcgcctcg
ggggccgtgaccatggctccggtcgccgcgctgccggtgcgggtggagagcaccccggtg
gccctgggccctgtgactaaggctcccgtcagtgtctgcgtggagtctgtggcgccccag
cccttgccagccccggtggggactctagtgaccaaagtggttcctgtcactgcccttcct
aaactcggcagccctaggctgcccgctcctcagatagtcaccgtgaaaacgcccggcacc
acgacaatccaactaccggctaatttgcagcttcctccaggaacagttttgatcaaaagt
aacagtggtcagttgatgctggtatctcctcagcaagctgtaacaggagccaagaccaca
agtaacataactccaagaccagcagtaccagcaaacactcaaacagtcaagatatgtaca
gtgccgaattctagctcacagttaatgaagaaagtaacagtggcacctgttaaaaatttg
acacagataggaactactgtggcaaccactgcctccagtacttcctcaggacagcctgtg
gctgtaccaagcagtgctgtcacagttactcctgcaaagccggtgaatactgtatctatc
ctgaagtcatcaagtttgggagtattatctaccccctcaaatgactcaagtctcaaagct
gagacttcagtagctgctcagactggtcttcctgcgacagtgctagaaaatgtgaaaaaa
tgtaaaaacttcctttcaatgttaataaaactagcatgtagtggatcacagtctccagaa
atggggcagaatgtgaagaagctggtggaacaacttttggatgcagaaattgaagcagaa
gagtttactaggaaactgtacattgagctcaagtctgcacctcagccgcaccttgtccct
ttccttaagaagagtgtggttgccttaagacagcttcttccaaattcccagagcttcatt
gagaactgtgttaaggaagtttctggtgatgtggtgatttcctcctgtaccatgacaaca
gcaacttctcctgtggtgacaagcacagtttccccagcccttgtttctggagcaacaaca
cccagaactctgtctgttcaacagaccctgaatccactcactggtccaggtgtagcaaac
actggagttgtgacactgcattctgttgccccagctgctgcaacaggaggtacatcagct
gcaactgttttgcttcaaacttcaaaaccactgacaacatcggtaccaaatacagtggca
gcagtgtcccttcagcctgagaatccagctgtgtctggggcagcagtagcactggctgtt
ccctcagcaacctttggagaaacatctactacacctctctgtcttccatctgtgaagcct
gccattacctctgctgggaccaaagctgacaaacctgccattggcactccagtccagatc
atgacacagccgagccccctccttccacaggcagctggcattccacaggcagccaaagtc
aagcaagtattttcattatttcaggtcgtacagcagccttcaggaagcagtgtgaatcat
gtgacctccatttcctattcctcaccattgagcactcagaactgtgggcagaagacacca
gtgaatgctgtgatgcctactagtaagtttactacatcttccatcataaagcaaattact
ctgcctgcaaataaacttttgtcgcttcaagctcaaacatcttctattcagaacaataaa
ataaaagagaatggaccagcatgcttcagaggtgaagatgacatcaatgatgtgactttc
atggcagaggtcaaccttgatgaagaaaatgcctgcatcttagcaacacattctgaattt
gttggcacacttattcagtcatgtaaagaagaaccattccttgtcattggagctctacaa
aagagaattttagacattggtaaaaagcatgacattacggaacttaactctgatgctgtg
aacttgatctcccatgcaactcaggagagattacgaggccttctagagaaactaactaca
attgctcagcatcgaatgactatttacaagggaagtgaaaattacatcttgtctactgat
accagatcacagctcaaatttcttgaaaagctcgatcaattggagaaacagaggaaggat
ttagaagaaagagagatgttactaaaggcagccaagagtcgctccaataaagaagatcca
gagcagctgagattaaaacagaaagccaaagagttgcagcagttggagcttgcccagatc
cagtacagagatgctaatcttacagctcttgcagctattggaccaaggaagaagagacca
ctagaatcaggaaatgagagcttcaaagataacccttctacttctgggacttccagccta
acagccaccaaaccatgtcgtccaagaatcacaagaatctgcctcagggacttgatattc
tgtatggaacaggaaagagagatgaagtattctcgagccctgtaccttgcccttcttaag
tga
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