Mus pahari (shrew mouse): 110333559
Help
Entry
110333559 CDS
T05929
Symbol
Tmc3
Name
(RefSeq) transmembrane channel-like protein 3 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpah02000
]
110333559 (Tmc3)
03037 Cilium and associated proteins [BR:
mpah03037
]
110333559 (Tmc3)
Transporters [BR:
mpah02000
]
Other transporters
Pores ion channels [TC:
1
]
110333559 (Tmc3)
Cilium and associated proteins [BR:
mpah03037
]
Other cilia and associated proteins
Stereociliary proteins
110333559 (Tmc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
TMEM43
Motif
Other DBs
NCBI-GeneID:
110333559
NCBI-ProteinID:
XP_021070793
Ensembl:
MGP_PahariEiJ_G0013160
LinkDB
All DBs
Position
1:54993568..55032983
Genome browser
AA seq
1130 aa
AA seq
DB search
MKTPKASQRSRSIRRNASQCYLYQDSLLLGNSDDSFNADETGDSSDPEQIFQNIQFQKDL
MANIRCRPWTMGQKLRALRRAKEIVLKFEGRLTRTRGYQAAGAELWRKFARLACNFVVIF
IPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTVMTGAFVVLPELIAGQPFGSTASK
TIPREQVTSAQDLDTVWSLGGYLQYSVLFYGYYGRERQIGRAGYRLPLAYFLVGMAVFAY
SFIVLLKKMAKNSRTSLASASNENYTFCWRVFCAWDYLIGNPEAAESKTAAILNSIREAI
LEEQEKKKNKNMAVTVCLRIIANILVLLSLAGSIYLIYFVVDRSQKLEQSKKELTLWEKN
EVSVVVSLVTMLAPSAFDLIAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIALLDKVNS
MNIEEAATKNITSHWADAPTFSATRTVSEEGQWPTPGSGVELRRNTSTWVAEETSFLTSI
TPHTKANKTVPYIQGPQGQCWETYVGQEMLKLSVIDMLFTVASILLIDFFRGLFVRYLSD
YWCWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSWA
VLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVHYKPSLNCGPFSGQEKIYD
IVSETIENDFPTWFHAVVGHISSPVVILPAVLLLFMLIYYLQSIARSLKLSSQQLRMQIQ
NARSEDKKKVAQMVEALAIPSDARQAGSAPEADSSKNSKPKTLQARIQTHEESSKRLLKD
GDLISQLSSAYMATSPNNGHMRNFDSLSSKSLRMEVITRSLPQSPGQGSRGPCSPLPDGS
RSRPEQDTNRHPHGPCSSTSNLHKNRSCSSVTQTQPLKDVRSEPLSRKDFQPISPPFCGS
GVSALMTHDHSPRAPRYYVVNERDPHKKTHPAFWPERHFKIDALGDIVELYPRNMQRYMS
WVPHQPCSPQLSEEEEEMLRRDLVQWSIPASSLTDLPRSSCFYTGDRSENNTRDPKYQRR
VYYRSGDNSFEDQLERPTFVHRKPRSRNGQYPQHALKARVKAKFEPSFTESDSVSAASSS
DQQNSNNDQYLHVMSSQGRFPRSASQLGRRKAKSRQVLPTELNDLICSNV
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccccaaaggcatcccagcgctccagaagcatccggagaaatgccagccagtgc
tatctctaccaggactccctgcttcttggtaactccgatgacagctttaatgctgatgaa
acgggagacagcagtgatccggaacaaatcttccagaatatacagtttcagaaagatctc
atggcaaatatccgctgcagaccctggaccatggggcagaagctgcgggcactgaggcga
gccaaggaaattgtgctgaagtttgaagggaggctgaccaggactcgaggctaccaagca
gcaggagcagagctctggcggaaattcgcccgtctggcctgtaactttgtggttatcttc
atcccctgggaaatgaggataaagaaaattgagagtcactttggatctggcgtggcctcc
tacttcatcttcctgaggtggttatttggaattaacatagtgctcacagtgatgactggt
gcctttgttgtccttcctgagctgatcgcaggccagccctttggaagtacagccagcaag
accattccccgagagcaggtcacatctgcacaggatctggacactgtctggtccctgggg
ggctaccttcagtactctgtcctgttctacgggtactacggaagagagaggcagatcggg
agagccggctaccgcctgcccttggcatatttcctggtggggatggcagtgtttgcgtac
agcttcatcgttctcttaaaaaagatggctaagaactcccgcaccagcctggccagtgct
tccaatgaaaactacaccttctgctggcgggtgttttgtgcctgggactatctcattgga
aacccagaggctgcagaaagcaaaacagctgccatcctgaacagcattagggaggccata
ctggaagagcaagaaaagaaaaaaaacaaaaacatggcggtgaccgtctgcctgagaatc
attgccaacatcctagtgctcctctcactggctggaagcatctatctcatctactttgtg
gtggaccggtcccagaagctggagcagtcgaagaaggagctgacgctttgggaaaagaat
gaggtaagcgtggtagtctccctcgtcaccatgctagcaccgtctgcctttgacctcatc
gctgccttggagatgtaccatccacggacgacgctgcgcttccagttagcaagggtcctg
gtactgtatctaggaaatctctacagcttgatcattgctcttctggacaaagtgaacagc
atgaacattgaggaagctgctactaaaaacatcacaagccactgggcagatgctcccact
ttctctgccaccaggacagtgtctgaagaagggcagtggcccacacctgggtcaggagtg
gagctcagaagaaacactagcacatgggttgcggaagagacaagctttctgacttctatc
acgccacacacaaaggccaacaagacagtgccctacatccagggcccacaaggccagtgc
tgggagacatatgtcggccaggagatgctgaagctgtctgtcattgacatgctcttcacc
gtggccagcatcctcctcatagacttcttccggggactttttgttcgctacctaagtgac
tattggtgttgggaccttgaaagcaagtttcctgaatatggagaattcaagattgccgag
aatgtgctgcaccttgtctacaatcaaggcatgatttggatgggggccttcttctctccg
tgtcttccagcattcaatgttctcaagctcattgggctgatgtacttgaggagctgggca
gtgctgacctgcaatgtaccccaccagcaagtgtttcgagcttccagatccaacaacttc
tacctggcaatgctcctgttcatgctgttcctctgcatgctgccgaccatctttgcgatt
gtccactacaagccatctctgaactgtggtcccttcagtggacaagagaagatttatgac
attgtgtctgagacgatagagaatgacttccccacgtggtttcatgctgtagttggacat
atcagcagccccgtggtgatacttccagctgtgctgctcctgttcatgctcatctactac
cttcagagcatcgcgagatcactcaagctcagcagccagcaactcaggatgcagatccaa
aacgcaagatctgaagataagaaaaaggtggcccaaatggtagaggccctagccatccct
agcgatgccaggcaggcaggctcagcccctgaagcagattcaagtaaaaattcaaagcca
aagactctgcaagctcgaatccagactcacgaggaaagcagcaagaggcttctaaaggac
ggcgacctcatcagccagctgtcctcagcatatatggcaacatccccaaacaatggccat
atgcgtaacttcgactctctgagtagcaagagcctcaggatggaggtgatcacaaggtcc
ctgccccagagtcctggacaagggtctaggggcccctgctctcctcttccagatggatct
aggtcaaggccagagcaggacaccaacaggcatccacatgggccatgttccagcacaagc
aacctccacaagaacagatcctgctcgtctgtgacacagacacagcccctcaaagatgtc
cgctcagagcctctttcccgtaaagactttcagccaatcagtcctcctttctgtggatct
ggggtctctgccttgatgacacatgaccacagtccccgtgctcctagatactatgtcgtt
aacgaacgtgaccctcacaaaaagacccacccagctttctggccagaaagacatttcaag
atagatgctttaggtgacattgtagagctgtaccccaggaatatgcagcggtacatgtcc
tgggttccccaccagccttgctctccacagctgagtgaagaagaggaggagatgctgagg
agagatttggtccagtggtcaatccctgctagctccctgacagacctccctcggtcttct
tgtttttacactggtgacagatcagaaaataacaccagagatcctaaataccagcgaagg
gtgtactacagatctggggataatagttttgaagaccagcttgagaggcccacatttgta
cacagaaagccacgatccaggaacggccaatacccacagcatgctctgaaggccagagtc
aaggccaagttcgagccgtccttcacagaatctgattctgtgtcagcagcatccagcagt
gaccagcaaaacagcaacaatgaccaatacctgcatgtcatgtccagccagggcagattc
ccaaggtctgccagccagctgggcaggaggaaggccaagtccaggcaggtactgcccaca
gagctaaatgatctaatttgttcaaatgtctag
DBGET
integrated database retrieval system
