Mus pahari (shrew mouse): 110333579
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Entry
110333579 CDS
T05929
Symbol
Vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04140
Autophagy - animal
mpah04148
Efferocytosis
mpah05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110333579 (Vps41)
04148 Efferocytosis
110333579 (Vps41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110333579 (Vps41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110333579 (Vps41)
Membrane trafficking [BR:
mpah04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
110333579 (Vps41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
ANAPC4_WD40
Vps39_1
Vps39_2
zf-RING_5
Frtz
RIG-I_C
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
110333579
NCBI-ProteinID:
XP_021070842
Ensembl:
MGP_PahariEiJ_G0019300
LinkDB
All DBs
Position
16:22107697..22266777
Genome browser
AA seq
853 aa
AA seq
DB search
MAEAEEQETESLEESTDESEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLALG
THYGKVYLLDVQGNITQKFDVSPVKINQISLDDSGEHMGVCSEDGKLQVFGLYSGEEFHE
TFDCPIKIIAVHPQFVRSSCKQFVTGGKKLLLFERTWMNRWKSSVLHEGEGNIRSVKWRG
HLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSIKIC
AVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCAR
PRLDIIQPLPETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYVVSPRDVVVAKERD
QDDHIDWLLEKKKYEEALMAAEISQRNIKRHKILDIGLAYVNHLVERGEYDMAARKCQKI
LGKNASLWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLVR
EWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALEIYLTLRHKDVFQ
LIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHKL
FKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLS
RMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTHV
DPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQMK
GVLVDEENICESCLSPILPTDAAKPFSVVVFHCRHMFHKECLPMPSMNAPAQYCNICSAK
NRGPGSAILEMKK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcagaggagcaggaaaccgagtctcttgaagaatctacagatgagtcagag
gaagaaagtgaagaggaacccaaactgaagtatgaaaggctttccaatggggtgacggag
attcttcagaaggatgcagcaagctgtatgacggtccatgacaagtttttggcactgggt
acacattatggcaaggtttatttacttgatgtccagggaaacatcactcagaagtttgat
gtaagtcctgtgaagataaaccagattagcttggatgacagtggagaacacatgggagtg
tgttcagaggatggcaagctacaggtctttggactgtattctggagaagaatttcacgag
actttcgactgtcccattaaaatcattgctgtgcacccacagttcgtgagatccagttgt
aagcagtttgtaactggcgggaaaaagttgctgctatttgaacggacctggatgaacaga
tggaagtcttctgtcctacacgaaggggaagggaacatcaggagtgtgaagtggagaggc
catctgattgcttgggccaacaatatgggtgtgaaaatttttgacatcacctcaaagcaa
agaatcaccaatgttccccgagatgatataagtcttcgcccagatatgtatccctgcagc
ctctgttggaaggacaatgtgacactcattattggctggggaacttccatcaagatatgc
gcagtgaaggaacgccacgccagtgagatgagggatctgccaagtcgatatgttgagata
gtgtctcagtttgaaactgaattctacattagtggacttgcacctctctgtgatcagctt
gttgtactttcctacgtaaaggaggtttcagaaaaaacggaaagagaatactgtgcaaga
cctagactggacatcatccagccacttccggagacgtgtgaagagatctcctccgacgct
ttgacagtcagaggctttcaggagaatgagtgtcgggattaccacttagaatactctgag
ggggaatcactcttctacgtcgtgagtccaagagatgtcgtcgtcgccaaggaacgagac
caggatgatcatatcgactggctccttgagaagaagaaatatgaagaagctttgatggca
gctgaaattagccaaaggaacattaaacgacataagattctggatatcgggttggcatat
gtaaaccacctggtggagagaggagagtacgacatggctgcaagaaaatgccagaaaatt
cttgggaaaaatgcatccctctgggaatatgaagtttacaaatttaaagaaattgggcag
cttaaagcaattagtccctatttacctcgaggggacccagttctgaaaccacttatctat
gaaatgattttgcatgaatttctggaaagtgactatgagggctttgccacactggtcaga
gagtggcctggagatctgtataacaattccgtgatagttcaagcagttcgagaccacctg
aagaaggacagtcagaacaaaacgttattgaaaacactggcagaattgtacacctatgac
aaaaattatggcaatgctctggaaatatacttaacgttaagacataaagatgttttccag
ctgatacacaagcataatcttttcagctccatcaaggataagattgtgttactaatggat
tttgactcagagaaagctgttgatatgcttttggacaatgaagataaaatttcaattaaa
aaagtggtagaagagttagaagacagaccagagctgcagcatgtgtatttgcacaagctc
ttcaagagagaccatcataagggacagcgctaccatgaaaaacagatcagtctgtatgcc
gaatatgaccgaccaaacctacttccctttctccgagacagtacccattgcccacttgaa
aaggcacttgagatctgtcaacaaagaaactttgtagaagagacagtttaccttctgagc
cgaatgggaaacagtcgaagtgccctcaagatgattatggaagaattgcatgatgttgat
aaagcaattgagtttgccaaggaacaagatgatggagagctctgggaagatctgattctg
tattccatcgacaaaccaccatttatcactggcttgttgaacaacattggcacacatgtg
gacccaattttactgatccaccgaattaaggaaggaatggagattcccaatttgagagat
tccttggttaaaattctgcaagattataacttgcagattctgcttcgggaaggctgcaag
aaaatcctcgtagctgactcgttgtcattgctgaaaaaaatgcaccgaacccaaatgaaa
ggcgttctggttgatgaagagaatatctgtgaatcgtgcctttctcctatcctcccaaca
gatgcagcgaagcccttcagtgtggtggtcttccactgccggcacatgttccacaaggag
tgcctgcctatgccgagcatgaatgctcctgcacaatactgcaacatctgtagtgctaag
aaccgtgggcctggaagtgccatcctagagatgaagaagtag
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