KEGG   Mus pahari (shrew mouse): 110333595
Entry
110333595         CDS       T05929                                 
Symbol
Ptch1
Name
(RefSeq) protein patched homolog 1
  KO
K06225  patched 1
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04024  cAMP signaling pathway
mpah04340  Hedgehog signaling pathway
mpah04360  Axon guidance
mpah05200  Pathways in cancer
mpah05205  Proteoglycans in cancer
mpah05217  Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    110333595 (Ptch1)
   04024 cAMP signaling pathway
    110333595 (Ptch1)
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    110333595 (Ptch1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    110333595 (Ptch1)
   05205 Proteoglycans in cancer
    110333595 (Ptch1)
  09162 Cancer: specific types
   05217 Basal cell carcinoma
    110333595 (Ptch1)
SSDB
Motif
Pfam: Sterol-sensing Patched
Other DBs
NCBI-GeneID: 110333595
NCBI-ProteinID: XP_021070861
Ensembl: MGP_PahariEiJ_G0019698
LinkDB
Position
16:complement(65918469..65983867)
AA seq 1434 aa
MASAGNAAGALGRQAGGGRRRRTGGPHRAAPDRDYLHRPSYCDAAFALEQISKGKATGRK
APLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGG
RVSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYN
RQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPL
RWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNST
KPLDVALVLNGGCQGLSRKYMHWQEELIVGGTVKNATGKLVSAHALQTMFQLMTPKQMYE
HFRGYDYVSHINWNEDRAAAILEAWQRTYVEVVHQSVAPNSTQKVLSFTTTTLDDILKSF
SDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGIS
FNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSIS
NVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCF
TSPCVSRVIQVEPQAYTEPHSNTRYSPPPPYTSHSFAHETHITMQSTVQLRTEYDPHTHV
YYTTAEPRSEISVQPVTVTQDNLSCQSPESTSSTRDLLSQFSDSSLHCLEPPCTKWTLSS
FAEKHYAPFLLKPKAKVVVILLFLGLLGVSLYGTTRVRDGLDLTDIVPRETREYDFIAAQ
FKYFSFYNMYIVTQKADYPNIQHLLYDLHKSFSNVKYVMLEENKQLPQMWLHYFRDWLQG
LQDAFDSDWETGRIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLTKQRLVDADGII
NPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQF
PFYLNGLRDTSDFVEAIEKVRVICNNYTSLGLPSYPNGYPFLFWEQYISLRHWLLLSISV
VLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGV
EFTVHVALAFLTAIGDKNHRAMLALEHMFAPVLDGAVSTLLGVLMLAGSEFDFIVRYFFA
VLAILTVLGVLNGLVLLPVLLSFFGPCPEVSPANGLNRLPTPSPEPPPSVVRFAVPPGHT
NNGSDSSDSEYSSQTTVSGLSEELRQYEAQQGAGGPAHQVIVEATENPVFARSTVVHPDS
RHQPPLNLRQQPHLDSGSLSPGRQGQQPRRDPPREGLRPPPYRPRRDAFEISTEGHSGPS
NRDRSGPRGARSHNSRNPTSTAMGSSVPSYCQPITTVTASASVTVAVHPPPGPGRNPRGG
PCPGYESYPETDHGVFEDPHVPFHVRCERRDSKVEVIELQDVECEERPWGSSSN
NT seq 4305 nt   +upstreamnt  +downstreamnt
atggcctcggctggtaacgccgccggggccctgggcaggcaggccggcggcgggaggcgc
agacggaccgggggaccgcaccgagccgcgccggaccgggactatctgcaccggcccagc
tactgcgacgccgccttcgctctggagcagatttccaaggggaaggctactggccggaaa
gcgccgctgtggctgagagcgaagtttcagagactcttatttaaactgggttgttacatt
caaaagaactgcggcaagtttttggttgtgggtctcctcatatttggggccttcgctgtg
ggattaaaggcagctaatctcgagaccaacgtggaggagctgtgggtggaagttggtgga
cgagtgagtcgagaattaaattatacccgccagaagataggagaggaggctatgtttaat
cctcaactcatgatacagactccaaaagaagaaggcgctaatgttctgaccacagaggct
ctcctgcaacacctggactcagcactccaggccagtcgtgtgcacgtctacatgtataac
aggcaatggaagttggaacatttgtgctacaaatcaggggaacttatcacggagacaggt
tacatggatcagataatagaatacctttacccttgcttaatcattacacctttggactgc
ttctgggaaggggcaaagctacagtccgggacagcatacctcctaggtaagcctccttta
cggtggacaaactttgaccccttggaattcctagaagagttaaagaaaataaactaccaa
gtggacagctgggaggaaatgctgaataaagccgaagttggccatgggtacatggaccgg
ccttgcctcaacccagccgacccagattgccctgccacagcccccaacaaaaattcaacc
aaacctcttgatgtggcccttgttttgaatggtggatgtcaaggtttatccaggaagtat
atgcattggcaggaggagttgattgtgggtggtactgtcaagaatgccactggaaaactt
gtcagcgctcacgccctgcaaaccatgttccagttaatgactcccaagcaaatgtatgaa
cacttcaggggctacgactatgtctctcacatcaactggaatgaggacagggcagctgcc
atcctggaggcgtggcagaggacttacgtggaggtggttcatcaaagtgtcgccccaaac
tccactcaaaaggtgctttccttcaccaccacgaccctggacgacatcctaaaatccttc
tctgatgtcagtgtcatccgagtggccagtggctacctactgatgcttgcctatgcctgt
ttaaccatgctgcgctgggactgctccaagtcccagggtgcagtggggctggctggcgtc
ctgttggttgccctgtcagtggctgcaggattgggcctctgctccttgattggcatttct
ttcaatgctgcgacaactcaggttttgccattccttgctcttggtgttggtgtggacgac
gtcttcctcctggcccatgcattcagtgaaacaggacagaataagaggattccgtttgag
gacaggactggggagtgcctcaagcgcacgggagccagcgtggccctcacctccatcagc
aatgtcaccgccttcttcatggctgcgttgatccctatccctgccctgcgcgcattctcc
ctccaggctgctgtggtggtggtattcaattttgctatggttctgctcatttttcctgca
attctcagcatggatttatacagacgtgaggacagaagactggatattttctgctgtttc
accagtccctgtgtcagcagggtgattcaagttgaaccacaggcctacacagagcctcac
agtaacacccggtacagccccccacccccgtacaccagccacagcttcgcccacgaaacc
cacatcactatgcagtccaccgttcagctccgcacagagtacgaccctcacacacacgtg
tactacaccaccgccgagccacgctccgagatctccgtacagcctgtcactgtcacccag
gacaacctcagctgtcagagccccgagagcaccagctccaccagggacctgctttcccag
ttctcagactccagcctccactgccttgagcccccctgcaccaagtggacgctctcttcg
tttgcagagaagcactatgcccctttcctcctgaaacccaaagccaaggttgtggtgatc
cttcttttcctgggcttgctgggagtcagcctttatgggaccacccgagtgagagacggg
ctggacctcacggacattgttccccgggaaaccagagagtatgacttcatagctgcccaa
ttcaagtacttctctttctacaacatgtatatagtcacccagaaagcagactacccgaat
atccagcacctactttacgaccttcataagagtttcagcaatgtgaagtatgtcatgctg
gaggagaacaagcaacttccccagatgtggctgcactacttcagagactggcttcaagga
cttcaggatgcatttgacagtgactgggaaactgggaggatcatgccaaacaattataaa
aatggatcagatgacggggtcctcgcttacaaactcctggtgcagacgggcagccgagac
aagcccatcgacattagtcagttgactaaacagcgtctggtggacgcagatggcatcatt
aatccgagcgctttctacatctacctgacggcttgggtcagcaacgaccctgtagcttac
gctgcctcccaggccaacatccggcctcaccgaccagagtgggtccacgacaaagccgac
tacatgccagagaccagactgagaatcccagcagcagagcccatcgagtacgcacagttc
cctttctacctcaacggcctacgagacacctcagactttgtggaagccatagaaaaagtg
agagtcatctgtaacaactatacgagcctgggactgcccagctaccccaatggctacccc
ttcctgttctgggagcagtacatcagcctgcgccactggctgctgctatccatcagcgtg
gtgctggcctgcacgtttctagtgtgcgcagtcttcctcctgaacccctggacggccggg
atcattgtcatggtcctggctttgatgaccgttgaactctttggcatgatgggactcatt
gggatcaagctgagtgctgtgcctgtggtcatcctgattgcatctgttggcatcggagtg
gagttcaccgtccatgtggctttggcctttctgacagccattggggacaagaaccacagg
gctatgctcgctctggagcacatgttcgctcccgttctggacggtgctgtgtccactctg
ctgggtgtcctgatgcttgcagggtccgaattcgatttcattgtcagatacttctttgcc
gtcctggccattctcaccgtcttgggggttctcaatggactggtcctgctgcctgttctc
ttatccttctttggaccgtgtcctgaggtgtctccagccaatggcctaaaccgactgccc
actccttcgcctgagccgcccccaagtgtagtcaggtttgccgtgcctcctggtcacacg
aacaatgggtctgattcctcggactcggagtacagctctcagaccacagtgtctggcctc
agtgaggagctcaggcaatacgaagcccagcagggcgccggaggtcctgcccaccaagtg
attgtggaagccacagaaaaccctgtctttgcccggtccactgtggtccatccggactcc
agacatcagcctcccttgaaccttcggcaacagccccacctggactctggctccttgtcc
cctggacggcaaggccagcagcctcgaagggatccccccagagaaggcttgcggccgccc
ccttacagaccgcgcagagacgcttttgaaatttctactgaagggcattctggccctagc
aatagggaccgctcagggccccgcggggcccgttctcacaactctcggaacccaacgtcc
accgccatgggcagctctgtgcccagctactgccagcccatcaccactgtgacggcttcc
gcttctgtgactgtcgctgtgcatcccccgccaggacctgggcgcaacccccgaggggga
ccctgtccaggctatgagagctaccctgagactgatcacggggtgttcgaggatccccat
gtgccttttcatgtcaggtgtgagaggagggactcaaaggtggaggtcatagagctacag
gacgtggaatgtgaggagaggccgtgggggagcagctccaactga

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