Mus pahari (shrew mouse): 110333619
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Entry
110333619 CDS
T05929
Symbol
Nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03013
Nucleocytoplasmic transport
mpah03250
Viral life cycle - HIV-1
mpah05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110333619 (Nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110333619 (Nup153)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110333619 (Nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110333619 (Nup153)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110333619 (Nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
110333619
NCBI-ProteinID:
XP_021070902
Ensembl:
MGP_PahariEiJ_G0019551
LinkDB
All DBs
Position
16:complement(49559315..49616642)
Genome browser
AA seq
1464 aa
AA seq
DB search
MASGAGGIGGGGGGGKIRTRRCHQGPVKPYQQGRPQHQGILSRVTESVKNIVPGWLQRYF
NKSENACSCSPDADEVPPWPENREDEHVIYAEENTNTDDGRITPEPAGSNTEEPSTTSTA
SNYPDVLTRPSLHRSHLNFSVLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDD
NISTTSGFSSRASEKDIAVSKNTSLPPLWSPEAERSHSLSQHTAISSKKPAFNLSAFGTL
STSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQNKVRSTPYQAPVRRQMKAKQLNAQ
SYGVTSSTARRILQSLEKMSSPLADAKRIPSAVSSPLNSPLDRSGIDSTVFQAKKEKVDS
QYPPVQRLMTPKPVSIATNRTVYFKPSLTPSGDLRKTNQRIDKKNSTVDEKSVSRQNREQ
ESGFSYPNFSIPAANGLSSGVGSGGGKMRRERTHFVAPKPSENEEVEAPLLPQISLPIGS
SSLPTFSFSSPAISASPSPVSSSQPLPNKVQMTSLGSTGSPVFTFSSPIVKSTQADVLPP
ASIGFTFSVPLAKTEFSGSNSSSETVLSSPAQDNTAVNSSSYKKRSAPCEDPFTPAKILR
EGSVLDILKTPGFMSPKVDSPALQPTTTSSIVYTRPAISTFSSSGIEFGESLKAGSSWQC
DTCLLQNKVTDNKCIACQAAKLPLKETAKQTGTGTPSKNDKPASSSGTGFGDKFKPAIGT
WDCDTCLVQNKPEAVKCVACETPKPGTGVKRVLTLTVASESPVTASSSTTVTTGTLGFGD
KFKRPVGSWECPVCCVCNKAEDNRCVSCTSEKPGLVSASSSSPVPVTLSSGGCLGLDKFK
KPEGSWDCEVCLVQNKADSAKCIACESAKPGTKSELKGFGTSSSLNPAPSAFKFGIPSSS
SGLSQTLTSTGNFKFGDQGGFKLGTSSDSGSTNTMNTNFKFSKPTGDFKFGVLSDSKPEE
VKNDSKNDNFQFGPSSGLSNPASSAPFQFGVSTLGQQEKKEELPKSSSAGLSFGAGVNNP
PNAAIDTTVTSENKSGFNFGTLDTKSVSVTPFTYKTTEAKKEDAPATKGGFTFGKVDSAS
LQSASMFVLGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDESSSKPTF
SFSVAKPSGKESDQLAKATFAFGNQTNTTTDQGPAKPVFSFLNSSSSSSSAPATSSSGGI
FGSSTSSSNPPVAAFVFGQASNPVSSSAFGNSAESSTSQSLLFPQESKPATTSSTASAAS
PFVFGTGASSNSTVSSGFTFGATTTSSSSGSSFVFGTGHSAPSASPAFGANQTPTFGQSQ
GASQPNPPSFGSISSSTALFSAGSQPVPPPTFGTVSSSSQPPVFGQQPSQSAFGSGTANA
SSVFQFGSSTTNFNFTNNNPSGVFTFGASPSTPAASAQPSGSGVFSFSQSPASFTVGSNG
KNMFSSSGTSVSGRKIKTAVRRRK
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggagccggaggcataggagggggcggcggcggtggcaagatccggactcgt
cgatgccaccaggggccggtgaagccttaccagcaggggcgaccccaacaccagggcatt
cttagcagggttacagaatctgttaagaatattgtaccagggtggctacaaagatacttc
aacaagagtgaaaatgcctgcagctgttcaccagatgcagatgaagttccaccctggcca
gaaaatagagaagatgagcatgtgatttatgcggaagagaacacaaacactgatgatggg
agaatcacccctgagcctgcaggcagtaacacagaagaaccatcaacaaccagtactgct
tcaaattatccagatgtgttaacaagaccttctcttcatcggagtcatctgaatttctct
gtgttggaatcccctgctttgcactgtcagccgtccacgtcctctgcgttcccaattggc
agttctggattttcccttgtgaaggagattaaagattctacctctcagcatgatgatgat
aacatctcaactactagtgggttctcttcaagagcatctgagaaagatatagctgtttca
aagaacacttccctgccacctttgtggtcccccgaagcagaacgttctcattcactctca
cagcatactgccatcagctccaaaaaaccagcattcaacttgtctgcctttggaacactt
tccacctcacttgggaattcttcaattcttaaaacaagtcagcttggagactctcctttt
tatcctggcaaaacaacatatggaggggcagctgctgctgtaagacagaataaagtacga
agtacaccttaccaggctccagttagaagacagatgaaagctaagcagctcaatgcacag
tcttatggtgtgaccagctcaacagcacggcggatactgcaatcattagaaaagatgtca
agccctcttgcggatgcaaaaagaattccatctgctgtttcttctcctctgaattctcct
cttgataggagtgggattgatagcacagtttttcaggcaaaaaaagaaaaggtggactct
cagtatcctcctgtacagagactaatgaccccaaagccagtttccatagcaacaaataga
actgtctattttaaaccatctctgaccccatctggtgacttaaggaagactaatcaaagg
atagataaaaagaacagtactgtagatgaaaaaagtgtctcaaggcaaaatagagagcaa
gaaagtggcttttcataccccaatttcagtattcctgcagccaatggtttatcttctgga
gtaggtagtggaggtggcaagatgagaagagagagaacacattttgttgctcctaaacct
tcagagaatgaggaagtggaagcaccgttgttaccgcagatctctctaccaatcggcagt
tcttcactgcccaccttcagttttagttcccctgcgatctcggcttctccttcaccagtc
agctcttctcagccattaccaaacaaggtacagatgacctctctgggcagcacgggcagt
cctgtgttcacattctcatctcccattgtaaaatctacgcaggcagatgtgctacctcca
gcatctattggatttacatttagtgtgcctcttgcaaaaactgaattttctggctctaat
agttcttcagaaacagttttaagtagtccagctcaagataacactgcagtgaatagttca
agctataagaagcgaagtgccccttgtgaggacccctttacacctgcaaagatcctgaga
gaaggaagtgttctagacattctgaaaacgcctggttttatgtcaccaaaggttgattct
cctgctcttcagcccactaccacaagctcaatagtttatacaagaccagcaataagtact
ttttcttctagtggaattgaatttggagaaagtttaaaagctggatcatcatggcagtgt
gacacatgtctcctccagaacaaagtcacagacaataagtgtatagcctgtcaagcagca
aaactgcctctgaaagaaactgctaaacagactgggactggaacaccaagcaaaaatgac
aaaccagcttcttcatcagggacaggctttggagataaatttaaaccagcaataggaact
tgggattgtgatacctgtttagtgcaaaataagccagaagctgtaaaatgtgtagcttgt
gaaacacccaaacctggcactggtgtgaagcgagtccttacattgacagtggcttcagaa
agtcctgtgactgcttcctcttctaccactgtgacaactggtacactaggatttggagat
aaattcaaaaggcctgtgggctcttgggagtgtccagtctgctgtgtttgtaataaggca
gaagacaacagatgtgtttcctgtacatctgagaaaccaggtttggtatctgcctcaagc
agcagccctgtccccgtcactctgtcttctggaggctgtttaggattggacaagtttaaa
aagcctgagggaagctgggactgtgaagtgtgcctagtgcaaaataaagcagactctgcc
aagtgcatagcttgtgaaagtgcaaagccaggcacaaagtccgaattgaaaggcttcggg
acatcttcatctttaaatccagcaccctcagccttcaaatttggtattccatcatcctct
tctgggctttctcaaactttgacaagcactggaaattttaaatttggagatcagggagga
ttcaaattaggcacttcatctgactctgggtctacaaacaccatgaatacaaactttaaa
ttttctaaaccaactggagattttaaatttggagtgttatctgattccaaacctgaagaa
gttaaaaatgacagcaagaatgataattttcagtttggaccttcttctggcttaagcaac
ccagcttcttcagctccatttcagtttggggtatctactcttgggcaacaagaaaagaaa
gaggagctgcctaaatcttcatctgcaggcttaagcttcggtgcaggtgttaataacccc
cctaatgctgctattgacaccacagtgacctcagagaataagagcggcttcaactttgga
accctagacactaagagtgtctcagtgactcctttcacatacaagacaacagaagcaaag
aaagaagatgcacctgctaccaagggtgggttcacgtttggtaaagtggactctgcttct
ttgcaatctgcctcaatgtttgttttgggaaggacagaggagaagcagcaagaacctgtt
acttctacttctctggtatttggaaagaaagccgacaatgaggagccaaagtgtcagcca
gtattttcctttgggaattcagagcaaaccaaagatgagagttcctccaagccgacattc
agcttcagtgtggcaaaaccatctgggaaggagtctgatcagctagccaaggctactttt
gcatttggaaatcagaccaatacaacaactgatcaaggtccagcaaagccagtttttagt
ttcttgaacagcagttcctctagttcaagtgctccagccacttcatccagtggtggcata
tttggtagttccacctcttcctccaacccacctgtggcagcctttgtgtttggacaggcc
agcaatcctgtcagcagctctgccttcggtaactctgctgaatccagtacatctcagtct
ttgctatttcctcaagagagcaagccagccaccacgtccagcactgcctcagctgcctct
ccgtttgtatttggaacaggagccagtagtaatagtactgtatcttctgggttcactttt
ggggctacaaccacgtcaagctcttcaggatcctcctttgtatttggcactggacattca
gcaccatctgccagtccagcatttggtgctaaccagactccaacatttggacaaagtcaa
ggtgccagccagcctaaccctccaagctttggctctatctcgtcttcaacagcgttattt
tctgctggttctcagcctgtaccaccacctacatttgggacagtgtcaagcagcagccaa
cctcctgtgtttggacagcagcctagtcagtctgcatttggctctggcacagccaatgcc
agttcggttttccaatttggtagcagcactacaaatttcaacttcacaaacaataatcca
tcaggagtgttcacatttggtgcaagtcccagcacgcctgcagcctcagcccagccctca
ggttcaggggtcttttcattcagccagtctccagcatcatttacagtggggtcaaatggg
aaaaatatgttctcttcttccggaacttcagtttctggtcgcaagataaagactgctgtt
agacgcaggaaataa
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