KEGG   Mus pahari (shrew mouse): 110333664
Entry
110333664         CDS       T05929                                 
Symbol
Sox4
Name
(RefSeq) transcription factor SOX-4
  KO
K23581  transcription factor SOX4 (SOX group C)
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    110333664 (Sox4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mpah03000]
    110333664 (Sox4)
Transcription factors [BR:mpah03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    110333664 (Sox4)
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 110333664
NCBI-ProteinID: XP_021071000
Ensembl: MGP_PahariEiJ_G0019451
LinkDB
Position
16:complement(32539945..32542044)
AA seq 440 aa
MVQQTNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKADDPSWCKTPSGHIK
RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIQEAERLRLKHM
ADYPDYKYRPRKKVKSGNAGAGSAATAKPGEKGDKVAGSSGHAGSSHAGGGAGGSSKPAP
KKSCGPKVAGSSVGKPHAKLVPAGGGKAAASFSPEQAALLPLGEPTAVYKVRTPSAATPA
ASSSPSSALATPAKHPADKKVKRVYLFGSLGASASPVGGLGASADPSDPLGLYEDGGPGC
SPDGRSLSGRSSVASSPTASRSPADHRGYASLRAASPAPSSAPSHASSSLSSSSSSSSGS
SSSDDEFEDDLLDLNPSSNFESMSLGSFSSSSALDRDLDFNFEPGSGSHFEFPDYCTPEV
SEMISGDWLESSISNLVFTY
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggtccaacagaccaacaacgcggaaaacacggaggctctgctggccggggagagctca
gactcgggcgccggcctggagctgggcatcgcgtcctccccgacgcctggctccaccgcg
tccacgggcggcaaggcggacgaccccagctggtgcaagacgcccagtggccacatcaag
cgacccatgaacgcctttatggtgtggtcgcagatcgagcggcgcaagatcatggagcag
tcgcccgacatgcacaacgccgagatctccaagcggctgggcaaacgctggaagctgctc
aaggacagcgacaagatcccgttcatccaggaggcggagcggctgcgcctcaagcacatg
gctgactaccctgactacaagtaccggccgcgaaagaaggtgaagtcgggcaacgcgggc
gcgggatcggcggccacagccaagccaggggagaagggcgacaaggtcgcgggcagcagc
ggccacgcgggaagcagccacgcggggggtggcgcgggcggcagctccaagcccgcgccc
aagaagagctgtggccccaaggtggcgggcagctcggtcggcaagccccacgccaagctg
gtcccggcgggcggcggcaaggcggctgcatcgttctctccagagcaggctgccctgctg
cccctgggggagcccacggccgtctacaaggtgcggactcccagcgcggccaccccagcc
gcctcctcctcgccgtccagcgcgctggctaccccagccaaacaccctgcggacaagaaa
gtgaagcgcgtctacctgttcggaagcctgggcgcttcggcgtctcccgtcgggggcctg
ggagcgagcgccgaccccagcgatccactggggctgtacgaagatggaggcccgggatgc
tcgcccgatggccgaagtctgagcggccgcagcagcgtagcatcatcgcccaccgccagc
cgatcgcccgctgaccaccgcggctacgccagcctacgtgcagcctcgcccgccccgtcc
agcgcgccctcgcacgcgtcctcctcgctctcctcatcctcttcctcctcctctggctct
tcgtcgtccgacgacgagttcgaagacgacctgctcgacctgaaccccagctcaaacttt
gagagcatgtccctgggcagttttagctcctcatcggcgctcgatcgggacctggatttt
aacttcgaacccggctcaggctcccacttcgagttcccggactattgcacgcccgaggtg
agcgagatgatctcgggagattggctggagtccagcatctccaacctggtcttcacctac
tga

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