Mus pahari (shrew mouse): 110333709
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Entry
110333709 CDS
T05929
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-associated protein-like 3
KO
K24337
contactin associated protein-like 3/4
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mpah04990
]
110333709
Domain-containing proteins not elsewhere classified [BR:
mpah04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
110333709
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
McrBC
Alpha_GJ
Motif
Other DBs
NCBI-GeneID:
110333709
NCBI-ProteinID:
XP_021071046
Ensembl:
MGP_PahariEiJ_G0019709
LinkDB
All DBs
Position
16:complement(67055861..67196152)
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AA seq
1239 aa
AA seq
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MARVKGEFLDVLLLLLLLLLSVQTLPLVAAGDPHNCDAPLAASLPQLSFSSSSQLSSSHG
PGFARLNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSD
GGRNWKQYHQEESISGFPGNTNADSVVQYSLQPSFHTRFLRFLPLTWNPKGRIGMRIEVY
GCSYRSVILKELTQCFVFPSXGNGDLRPVNSIMNFTLGSLLDDRHWHSVLIELQNVHVNF
TLDKYMHHVHVNKEPSYLDLNFEISFGEILKPGGHFLTFTHKNFHGCLENIYYNGVNIIK
LAKKHESQILIKGNVSFTCPQPQTIPVTFLSSGSYLALPSSLREDKISLAFQLRTWNKAG
RVFFSQVGHGSGSLVLFLKNGKLILSLSEPGQPLKNITTGAVLNDGLWHSVSLSAKGSYL
SLLVDGDSSAQTLMSVGIHLVDTYYFGGCPNNSSSFGCEHSFGGFQGCLKLIFVGDKVVD
PIAVQQGVLGSFSDLQIDSCGIVDRCLPSYCEHGSRCTQSWDTFSCDCEGTGYTGTTCHS
SIYEQSCEAHRHRGSPSGLYYIDVDGSGPLAPFLVYCNMTADTAWTVVQHGGPDVVTVRG
GPEGHMRSATFSYAANAAQLHAVVDVAEHCEQQVDLQCRTSGPSDTGDGTSLSWWVGRTN
ETYTYWGGSLPDPQKCTCGLEGNCIDSQYHCNCDADQNEWTSDTIVLSHKEHLPVTEMVV
TDTGRPYSEAAYTLGPLLCQGDKSFWNSASFNTEASYLHFPTFHGELTADVHFLFKTTIS
SGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCELTIQSPTPFNDNRWHHVRAERNVK
GASLQVDQLPQKTQSTPADGHIRLQLNSQLFIGGTASRQKGFLGCIRSLQVNGMALDLEE
RAVMTPGVEPGCSGHCSSYGHLCRNGGKCQEKHRGIACDCAFSAYDGPLCSHEISAYFET
GSSVTYNFQEYSPLSANTSYLASSLHGDVILSRETITLSFRTTQTPCLLLYVTSFYEEYL
SVILANNGSLQVRYKLDRHRNVDAFNFDLRNLADGHFHQLMIDREEAVVSVEVNQSTKRQ
VILSSGTEFNAVKSLILGKVLEPLDADPETQQAAAQGFTGCLSSVRFGLEVPLKAALNQD
QARVTIQGSVVAAAHCAGGPGSAERKLSPGPSMGAGHSGSAEDRQPLPNTDRSDPGVIGG
ITAVVIFILLCVSAIAIRVHQQRRLHQKNESTVSKTEEC
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggcccgagtgaaaggagaattcctggatgtgttgctgcttctgcttctgctgctgctg
tctgttcagaccctgcccctagtagcagcaggagatccacacaattgtgatgctccgttg
gcggcttctttgcctcagttatccttcagcagctcctcacagctgtctagcagtcatggc
cctggctttgcaagactaaatagaagagatggagctggtggatggacaccacttgtatca
aataaatatcagtggctgcagattgaccttggagaacgaatggaggtcactgctgtggct
acccagggtggatatgggagttctgactgggtgaccagctacctcctgatgttcagtgat
ggtggaaggaactggaaacagtatcatcaagaagaaagcatctcgggatttccaggaaac
acaaatgcggacagtgtggtgcaatatagtctccagccttctttccacaccaggttcctg
cgcttcctccccttaacctggaaccctaagggcaggattggaatgcggatagaagtatat
gggtgttcatacagaagcgtgattcttaaagaactaacccagtgttttgtttttccttcc
taaggcaatggagacctgcgccctgttaattctatcatgaacttcaccttaggcagcctt
ctggatgaccggcactggcactcagtgctcattgagctccaaaatgtgcatgtgaacttc
accctggacaaatacatgcatcatgttcatgtgaacaaggaacccagttacttggatctt
aattttgagatcagctttggagaaatcctgaagcctggagggcatttcctgacattcaca
cataaaaattttcatggatgtttagaaaatatctattataacggagtcaatattattaaa
ttagccaagaaacatgaatcacaaatcctaattaagggaaatgtgtccttcacatgccca
caaccacagacaattccagtgacttttctgagttctgggagttacctggctttgccaagt
agtttaagggaagataaaatatccctcgcttttcagcttcgaacgtggaacaaggcagga
cgtgtgttttttagccaagtggggcatggttcaggaagtttggtcctgtttcttaagaat
ggaaaactgatactgagcctctctgagcctggtcaacccttgaagaacatcacaacaggt
gccgtactgaacgatgggctgtggcactcagtttccttgtctgctaagggtagctactta
agcctcctggtagatggagactcctctgctcagaccctgatgtctgtggggattcatttg
gttgacacttactattttggaggttgtcccaacaacagctctagctttgggtgtgaacat
tcttttggaggcttccagggatgcctgaagctcatctttgttggtgacaaagtagtggat
cctattgcagtacagcagggagtactgggcagcttcagtgacctccagatagactcctgt
ggcatcgtagaccgttgtttgcctagctactgtgagcatggaagtagatgtacccagtcg
tgggacactttctcctgtgactgtgaaggcacgggatacactggaacaacctgccattcc
tccatctatgaacagtcttgtgaagcccacaggcacagagggagcccttctggactttac
tacattgatgtagatggaagtggaccactggcaccatttcttgtgtactgcaatatgaca
gcagacacagcatggactgttgttcagcatggagggcccgatgtggtgacagtcagaggt
ggcccagaaggacacatgcgttctgcaaccttctcctatgctgccaatgcagcacagctg
catgctgtggtggatgttgcagagcactgtgagcaacaggtggacctacaatgcaggacc
tcagggccctcagatacaggagatggaacctcactgagctggtgggttggaagaaccaat
gaaacatacacttactggggaggttctcttcctgatcctcaaaagtgtacttgtggatta
gaagggaactgcattgattctcaataccactgcaactgtgatgctgaccagaatgaatgg
accagtgacacaatagtcctgtctcataaggagcacctgccagtcactgagatggtggtg
acagacacaggccgaccatactctgaagctgcttatacactgggacctttgctttgccag
ggagacaagtcattttggaactcagcttccttcaacactgaggcttcttaccttcatttc
ccaaccttccatggagagctcactgctgatgtgcacttcctttttaagaccaccatttcc
tctggtgtattcatggagaatctgggaatcactgacttcatcagaatagagttgcgtgct
cccactgaagtgaccttttcttttgatgttgggaatggaccttgtgagctcactatacag
tcaccgactccctttaatgacaaccggtggcatcatgttagagcagaaaggaatgttaag
ggagcatctcttcaggtagaccaactccctcaaaagacacaatccactcctgctgatgga
cacattcgactacagctcaacagtcaacttttcattggggggacggccagcaggcagaag
ggcttcctgggatgtatccggtcccttcaggtgaatggaatggcactagacctggaggaa
agggctgtaatgacaccaggagtggagccaggatgctcgggtcactgcagcagctatgga
cacctgtgtcgcaatggaggaaagtgtcaagagaaacacagagggattgcttgtgactgt
gccttctctgcctacgatgggccactgtgctcacatgagatttctgcatattttgaaacg
ggttcctcagtgacctataattttcaagaatattcccccctaagtgcaaacaccagctac
ctggcttcttcattgcatggggatgtcattctgtccagagaaaccatcacactgagcttc
cgaaccacacagacaccatgcttattgctctatgtgacctctttctatgaggaatacctc
tccgtcatcctggccaacaatggaagtttgcaggtgaggtacaagctggacagacatcgg
aatgtagatgctttcaactttgaccttagaaacttagcagatggtcactttcaccagctg
atgattgacagagaagaagcagtggtctctgtagaggttaaccagagtacaaagagacaa
gtcatcttgtcctcagggactgaattcaatgctgtcaaatcgctcatattgggaaaggtt
ttagaacccctggatgctgaccctgaaacacagcaggcagccgctcagggctttacaggc
tgcctctcttctgtgagatttggcttggaagtcccactgaaggctgcactgaatcaggac
caggccagagtcactattcaaggcagtgtggtcgctgcagctcattgtgcaggaggccct
ggctctgcagagaggaaactgtctccagggccctctatgggtgcaggtcattctggatcc
gcagaagatagacagccccttcctaacacagacaggagtgaccctggggtcattggagga
ataacagcagttgtgatatttattttgctctgtgtgtctgccatagccatacgggttcat
caacagagaagattacaccaaaagaatgagtcaacagtttcaaaaactgaagagtgctaa
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