Mus pahari (shrew mouse): 110334015
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Entry
110334015 CDS
T05929
Symbol
Nlrp6
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 6 isoform X1
KO
K20863
NACHT, LRR and PYD domains-containing protein 6
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110334015 (Nlrp6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mpah04054
]
110334015 (Nlrp6)
Pattern recognition receptors [BR:
mpah04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110334015 (Nlrp6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
PYRIN
NOD2_WH
AAA_16
Ribosomal_60s
nSTAND3
Motif
Other DBs
NCBI-GeneID:
110334015
NCBI-ProteinID:
XP_021071498
Ensembl:
MGP_PahariEiJ_G0013867
LinkDB
All DBs
Position
1:110280191..110287746
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AA seq
890 aa
AA seq
DB search
MCDPGCFGVSGTGPIQVASVMITLLITSSADAVARELLMAALQELTQEQLKRFRHKLRDA
PLDGRSIPWGRLERSDALDLVDKLIEFYEPVPAVEMTRQVLKRSDIRDVALKLKEQQLQK
FGPSSVLLFVSEFKKKYREHVLRQHAKVKERNARSVKINKRFTKLLIAPGTGAVENELLG
PSGEPEPERARRSDTHTFNRLFRGNEEEGSHPLTVVLQGPAGIGKTMAAKKILYDWAAGK
LYHSQVDFAFFIPCGELLERPGTRSLADLVLDQCPDRSWPVRRILAQPSRLLFILDGVDE
LPTLASSEATPCKDPFEATSGLRVLSGLLSQELLPSARLLVTTRNATTGRLQGRLCSPQC
AEIRGFSDKDKKKYFFKFFRDERKAERAYRFVKENETLFALCFVPFVCWIVCTVLQQQLE
LGRDLSRTSKTTTSVYLLFITSMLKSAGTNGPRVQGELRTLCRLAREGILDHHKAQFSEE
DLEKLKLRGSQVQTIFLNKKELPGVLKNEVTYQFIDQSFQEFLAALSYLLEAERTPGTPA
GGVQKLLNSNAELHGPLALTTRFLFGLLNTEGIRDIGNHFGCVVPDHVKKDTLQWVQGQS
HPKGPPGGAKKNAELEDIKEAEEEEEEEEEEEDLNFGLELLYCLYETQEEDFVRQALSSL
PEMVLERVRLTRMDLEVLNYCVQCCPDGQTLRLVSCGLVAAKEKKKKKSLVKRLKGSQST
KKKPPASLLRPLCETMITPQCHLSVLILSHCKLPDAVCRDLSEALKVAPALRELGLLQSQ
LTDTGLRLLCQGLAWPKCQVKTLRMQLPGLQEVINYLVIVLQQSTALTTLDLSGCQLPGV
MVEPLCSALKHPKCCLKTLSLTSVELSENSLRELQGVKTSKPDLSIIYSK
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacccggggtgctttggagtttcagggacaggtcctattcaggtcgcatcagtg
atgataacccttctcatcaccagctcagcggatgcggtggcaagggaactacttatggct
gcactgcaggagctgacccaggagcagctgaagcgttttcgccacaagctacgggatgcg
cccctggatggccgcagcatcccgtgggggcgactggagcgctcagatgctttggacctt
gtcgacaagctcattgagttctatgagccagtaccagctgtggaaatgacccggcaggtc
ctgaagaggtcggatattcgagatgtggccttgaaactcaaggagcagcagctgcagaaa
ttcggcccctcctcggtgcttctcttcgtgtcagagttcaagaagaagtaccgcgagcac
gtgctacgacagcatgctaaggtgaaggagaggaatgcccgctctgtgaagatcaacaag
cgcttcaccaagctgctcatcgctccggggaccggcgctgtggagaacgagctgctgggg
ccgtctggggagccggagcccgaacgcgctcggcgctcggacacgcacacttttaatcgg
ctcttccggggaaatgaggaggagggatcgcacccgctgaccgtggtgctgcagggcccg
gcgggcatcggcaaaaccatggccgccaagaaaatcctctacgactgggcagcaggtaag
ctataccacagccaggtggactttgccttcttcattccgtgcggcgagctgctggaacga
ccgggtacgcgcagcttggcggacctggtgctggatcagtgcccggaccgctcttggccg
gtgcggcggatactggcgcaacccagtcgcctactgttcatcctggacggtgtagatgag
ctgcctactttagcatcctcagaggccactccctgcaaagaccctttcgaggctacgagt
ggcttgagagtgctgagcgggctgctgagccaggagctgttaccatcagctcgcttgctg
gtgactacacgcaatgccactaccgggaggctgcagggcagattgtgctcgccacagtgc
gctgaaatacgtggcttctcagacaaagacaagaaaaagtatttcttcaagttcttccgg
gatgagaggaaggcagagcgcgcttaccgcttcgtaaaagagaacgagacgctgtttgca
ctgtgctttgtgcccttcgtgtgctggatcgtgtgcacagtgctgcagcagcaactagag
ctgggccgggatctctctcgtacctccaaaaccactacttctgtgtacctgctcttcatc
accagcatgctgaagtctgcaggcaccaatggaccccgggttcagggagagttgcgcacg
ctgtgccgcctggcccgggagggcatcctggatcatcataaagcacaattctcagaagag
gacctggagaaattgaagcttcggggttcccaagtccagacaatatttctcaacaagaag
gagctaccaggagtgctaaaaaatgaggtcacctaccagttcattgaccagagcttccag
gagttcttggctgcattgtcatacctattagaagctgagcgaaccccggggacgcccgca
ggcggtgtgcagaagctcctgaactccaatgcagagctgcatggtcctctggcactgacc
acccgattcctctttggcttgctaaatacagaggggattcgtgacattggaaaccatttt
ggctgtgtggtgccagatcatgtgaaaaaggacaccctgcaatgggtacaaggacagagc
caccccaaggggccaccaggaggggcaaaaaagaatgctgaactggaggacatcaaggaa
gcagaggaggaggaggaagaggaggaggaagaggaggatctcaattttggactggaactc
ttgtactgcctgtatgagacacaggaggaggattttgttcgacaggctctcagcagcctt
ccagagatggtactggagcgagttaggttgacccgtatggaccttgaggttctgaactac
tgcgtgcagtgctgcccagatggtcagactctgagactggtgagctgtgggctggtggca
gcaaaggagaagaagaagaagaagagcctggtgaagcggctgaagggctctcaaagcacc
aagaaaaaacccccagcctccttgctgcgtccactctgtgagacaatgattaccccacaa
tgtcatctgagtgttctgatcttgtcacactgcaaactccctgatgcagtttgtcgagac
ctttctgaggccctgaaggtagctcctgccctaagggagctgggcctcctccagagtcag
ctcactgacacaggcctacgtttactgtgccaaggcctggcttggcccaagtgccaggtg
aagacactcaggatgcagctgcctggcctccaagaggtgatcaattacttggtcatcgtg
ctccagcagagcacagctctgaccactctggacctcagtggctgtcagctgcctggagtc
atggtggaacctctgtgttcagccctgaagcaccctaaatgctgcctaaagaccctcagt
ctgacctctgtggagctgagtgagaactcactgagggaacttcaaggtgtgaagacatca
aagccagacctgtccatcatatattcaaaataa
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