Mus pahari (shrew mouse): 110334081
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Entry
110334081 CDS
T05929
Symbol
Optn
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04137
Mitophagy - animal
mpah04140
Autophagy - animal
mpah05014
Amyotrophic lateral sclerosis
mpah05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110334081 (Optn)
04137 Mitophagy - animal
110334081 (Optn)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110334081 (Optn)
05022 Pathways of neurodegeneration - multiple diseases
110334081 (Optn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110334081 (Optn)
Membrane trafficking [BR:
mpah04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110334081 (Optn)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
110334081 (Optn)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
110334081 (Optn)
Xenophagy
Cargo receptors
110334081 (Optn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
110334081
NCBI-ProteinID:
XP_021071594
Ensembl:
MGP_PahariEiJ_G0019209
LinkDB
All DBs
Position
16:complement(1974593..2019273)
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AA seq
584 aa
AA seq
DB search
MSHQPLSCLTEKGDSPCETPGNGPSNMVHPSLDTFTPEELLQQMKELLVENHQLKEAMKL
NNQAMKGRFEELSAWTEKQKEERLLFEMQSKEAKERLKALSDENERLKEELAKFKEKSEK
PFEDLTGDYRYPRGDLEQEVEKLKTQVEQEVDHLKIQVMRLQAEKADLLGIVSELQLKLN
SGSSSEDSFVEIRMTEGETEGAMKEMKNCLTPRTDSISMSNCTEAARTCAEFEELTVSQL
LLCLREGNQKVERLEVALREAKERISDFEKKANGHSAIEIQTEGRTDKEEDDNGQESVGS
EVETLSVQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSATPSELNEKQELVYS
NKKLELQVESMRSEIKMEQAKTEEEKSRLATLQATHNKLLQEHNKALKTIEELTKQQAEK
VDKMLLQELSEKLELAEQALAAKQLQMDEMKQTIAKQEEDLETMAVLRAQMEVYCSDFHA
ERAAREKIHEEKEQLALQLAMLLKENNDIEDGSSRQSLMEMQCRHGARTSDSDQQAYLFQ
RGAEDRSWQHGQQPRSIPIHSCPKCGEVLPDMDTLQIHVMDCII
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatcaacctctgagctgcctgactgagaagggggacagcccttgtgagacccca
ggaaatggaccctccaatatggttcaccccagcctggacacattcacccctgaggagctg
ctgcagcaaatgaaggaactcctggtcgagaaccaccagctgaaagaagccatgaagcta
aataatcaagctatgaaagggcgatttgaggagctgtccgcctggacagagaagcagaag
gaagagcgcctgttgtttgagatgcaaagcaaagaggctaaggagcgccttaaggccctg
agtgatgaaaatgagaggctgaaggaagagcttgcaaaattcaaagagaaatcagaaaag
ccatttgaagacctcacaggtgactacaggtatcccagaggggacttggagcaggaggtg
gagaagctgaagacccaggtggagcaggaggtggatcatctgaagatccaggtgatgcgc
cttcaggctgaaaaggcagacctgctgggcatcgtctcagaactgcagctcaaactcaac
tccggcagctcctcggaagactccttcgttgagatcaggatgaccgaaggagagactgaa
ggggcaatgaaggagatgaagaactgcctcacaccaagaacggactccatcagcatgagc
aactgtacggaggctgctaggacctgtgcggagtttgaagaattgactgtgagccagctt
ctgctttgcctaagggaaggaaaccaaaaggtggagagacttgaagtcgccctcagagaa
gccaaagaaagaatttcagattttgaaaagaaagcaaacggccattctgcaattgagatc
cagacagaggggagaacagacaaagaggaggacgacaatggccaagagagtgttggaagc
gaagtggaaacactgagcgttcaagtgacctctctgtttaaggagctccaagaggcacac
acgaaactcagcgaggccgagctgatgaagaagagacttcaagaaaagtgtcaggctctg
gagaggaagaactccgcaacgccatcagagctgaatgaaaagcaagagctcgtttacagt
aacaagaagttagagctgcaggtggagagcatgcgctccgaaatcaagatggagcaggcc
aagacggaggaggagaagtccaggttagccactctacaggcaactcacaacaagctcctt
caagaacataataaggctctgaaaacaatcgaagaactaaccaaacaacaggcagaaaag
gtggacaagatgttgctgcaggagctcagcgagaagctggagctggcagagcaggctctg
gcagccaaacagctccagatggatgagatgaagcagaccatcgctaagcaggaggaggac
ctggagaccatggctgtcctcagggctcagatggaggtgtactgttcagattttcatgct
gagagagcagcaagagagaagattcatgaagaaaaggagcagctggccttgcagcttgca
atgttgctgaaagagaacaatgacattgaagatggaagcagtagacagtccctgatggaa
atgcagtgccggcacggggcgagaaccagtgactctgaccagcaggcttacctgtttcaa
agaggagccgaggacaggagctggcaacacgggcagcagccccgcagtattccgattcac
tcatgccccaagtgcggggaggtcctgccggacatggacacgcttcaaattcatgtgatg
gactgcatcatctga
DBGET
integrated database retrieval system