KEGG   Mus pahari (shrew mouse): 110334081
Entry
110334081         CDS       T05929                                 
Symbol
Optn
Name
(RefSeq) optineurin
  KO
K19946  optineurin
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04137  Mitophagy - animal
mpah04140  Autophagy - animal
mpah05014  Amyotrophic lateral sclerosis
mpah05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    110334081 (Optn)
   04137 Mitophagy - animal
    110334081 (Optn)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    110334081 (Optn)
   05022 Pathways of neurodegeneration - multiple diseases
    110334081 (Optn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mpah04131]
    110334081 (Optn)
Membrane trafficking [BR:mpah04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    110334081 (Optn)
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    110334081 (Optn)
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    110334081 (Optn)
  Xenophagy
   Cargo receptors
    110334081 (Optn)
SSDB
Motif
Pfam: CC2-LZ NEMO zf_C2H2_10 zf-C2H2
Other DBs
NCBI-GeneID: 110334081
NCBI-ProteinID: XP_021071594
Ensembl: MGP_PahariEiJ_G0019209
LinkDB
Position
16:complement(1974593..2019273)
AA seq 584 aa
MSHQPLSCLTEKGDSPCETPGNGPSNMVHPSLDTFTPEELLQQMKELLVENHQLKEAMKL
NNQAMKGRFEELSAWTEKQKEERLLFEMQSKEAKERLKALSDENERLKEELAKFKEKSEK
PFEDLTGDYRYPRGDLEQEVEKLKTQVEQEVDHLKIQVMRLQAEKADLLGIVSELQLKLN
SGSSSEDSFVEIRMTEGETEGAMKEMKNCLTPRTDSISMSNCTEAARTCAEFEELTVSQL
LLCLREGNQKVERLEVALREAKERISDFEKKANGHSAIEIQTEGRTDKEEDDNGQESVGS
EVETLSVQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSATPSELNEKQELVYS
NKKLELQVESMRSEIKMEQAKTEEEKSRLATLQATHNKLLQEHNKALKTIEELTKQQAEK
VDKMLLQELSEKLELAEQALAAKQLQMDEMKQTIAKQEEDLETMAVLRAQMEVYCSDFHA
ERAAREKIHEEKEQLALQLAMLLKENNDIEDGSSRQSLMEMQCRHGARTSDSDQQAYLFQ
RGAEDRSWQHGQQPRSIPIHSCPKCGEVLPDMDTLQIHVMDCII
NT seq 1755 nt   +upstreamnt  +downstreamnt
atgtcccatcaacctctgagctgcctgactgagaagggggacagcccttgtgagacccca
ggaaatggaccctccaatatggttcaccccagcctggacacattcacccctgaggagctg
ctgcagcaaatgaaggaactcctggtcgagaaccaccagctgaaagaagccatgaagcta
aataatcaagctatgaaagggcgatttgaggagctgtccgcctggacagagaagcagaag
gaagagcgcctgttgtttgagatgcaaagcaaagaggctaaggagcgccttaaggccctg
agtgatgaaaatgagaggctgaaggaagagcttgcaaaattcaaagagaaatcagaaaag
ccatttgaagacctcacaggtgactacaggtatcccagaggggacttggagcaggaggtg
gagaagctgaagacccaggtggagcaggaggtggatcatctgaagatccaggtgatgcgc
cttcaggctgaaaaggcagacctgctgggcatcgtctcagaactgcagctcaaactcaac
tccggcagctcctcggaagactccttcgttgagatcaggatgaccgaaggagagactgaa
ggggcaatgaaggagatgaagaactgcctcacaccaagaacggactccatcagcatgagc
aactgtacggaggctgctaggacctgtgcggagtttgaagaattgactgtgagccagctt
ctgctttgcctaagggaaggaaaccaaaaggtggagagacttgaagtcgccctcagagaa
gccaaagaaagaatttcagattttgaaaagaaagcaaacggccattctgcaattgagatc
cagacagaggggagaacagacaaagaggaggacgacaatggccaagagagtgttggaagc
gaagtggaaacactgagcgttcaagtgacctctctgtttaaggagctccaagaggcacac
acgaaactcagcgaggccgagctgatgaagaagagacttcaagaaaagtgtcaggctctg
gagaggaagaactccgcaacgccatcagagctgaatgaaaagcaagagctcgtttacagt
aacaagaagttagagctgcaggtggagagcatgcgctccgaaatcaagatggagcaggcc
aagacggaggaggagaagtccaggttagccactctacaggcaactcacaacaagctcctt
caagaacataataaggctctgaaaacaatcgaagaactaaccaaacaacaggcagaaaag
gtggacaagatgttgctgcaggagctcagcgagaagctggagctggcagagcaggctctg
gcagccaaacagctccagatggatgagatgaagcagaccatcgctaagcaggaggaggac
ctggagaccatggctgtcctcagggctcagatggaggtgtactgttcagattttcatgct
gagagagcagcaagagagaagattcatgaagaaaaggagcagctggccttgcagcttgca
atgttgctgaaagagaacaatgacattgaagatggaagcagtagacagtccctgatggaa
atgcagtgccggcacggggcgagaaccagtgactctgaccagcaggcttacctgtttcaa
agaggagccgaggacaggagctggcaacacgggcagcagccccgcagtattccgattcac
tcatgccccaagtgcggggaggtcctgccggacatggacacgcttcaaattcatgtgatg
gactgcatcatctga

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