Mus pahari (shrew mouse): 110334620
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Entry
110334620 CDS
T05929
Symbol
Cntn1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110334620 (Cntn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110334620 (Cntn1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mpah00537
]
110334620 (Cntn1)
Cell adhesion molecules [BR:
mpah04515
]
Immunoglobulin superfamily
Contactins
110334620 (Cntn1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mpah00537
]
Others
110334620 (Cntn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_5
Sp38
C2-set_2
ChitinaseA_N
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
110334620
NCBI-ProteinID:
XP_021072043
Ensembl:
MGP_PahariEiJ_G0020191
LinkDB
All DBs
Position
17:56812419..57101318
Genome browser
AA seq
1020 aa
AA seq
DB search
MKMPLLVSHLLLISLTSCLGDFTWHRRYGHGVSEEDKGFGPIFEEQPINTIYPEESLEGK
VSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLVINNPDKQKDAGVYYCLASNNY
GMVRSTEATLSFGYLDPFPPEERPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVF
ITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPY
PADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNI
QLEDEGLYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIP
TIRWLKNGYAYHKGELRLYDVTFDNAGMYQCIAENAYGSIYANAELKILALAPTFEMNPM
KKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGG
IYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENATMQCAASFDPALDLTFVW
SFNGYVIDFNKEITHIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADL
VVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPI
IEGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGGG
TNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDTGRYVHKDETMTPST
AFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKIVE
SYQIRYWAGHDKETAAHRVQVTSQEYSVRLENLLPDTQYFIEVGACNSAGCGPSSDVIET
FTRKAPPSQPPRIISSVRSGSRYIITWDHVVALSNESTVTGYKILYRPDGQHDGKLFSTH
KHSIEVPIPRDGEYVVEVRAHSDGGDGVVSQVKISGVSTLSSGLLSLLLPSLGFLVYSEF
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgccattgctggtcagccatctcctgctaatctccttaacatcctgtctagga
gactttacatggcacagaagatatggtcatggagtgtccgaggaggacaaaggatttggg
cccatctttgaagagcaaccaatcaataccatttacccagaagagtcactggaaggaaaa
gtatcactcaactgccgggcacgcgccagcccatttccagtttacaaatggagaatgaat
aatggggacgtggacttgacaaacgaccggtacagtatggtgggaggaaaccttgttatc
aacaaccccgacaaacagaaggacgctggggtatactactgcctggcatccaacaactat
ggaatggtcaggagcacagaggcaaccctgagcttcgggtatctcgacccctttcctccc
gaggagcgtccggaagtgaaggtgaaggaagggaaaggcatggtgcttctctgcgatcct
ccctaccacttcccagatgatcttagctaccgctggcttctgaatgaatttcctgtattt
atcaccatggataaacgaagatttgtgtctcagaccaacggcaatctctacatcgcaaat
gtcgagtcctctgacagaggcaactactcctgctttgtgtccagtccttccattacaaag
agtgtgttcagcaagtttatacccctcattccaatacctgaacgaacaacaaagccatat
cctgctgatattgtggtgcagttcaaggacatatacaccatgatgggccaaaatgtgact
ttagagtgtttcgctcttgggaaccctgttcctgatatccggtggcggaaggtgctagaa
ccaatgcctagcactgccgagataagcacctcaggggctgtcctcaagatcttcaacatc
cagctagaagatgaaggcctctacgagtgtgaggctgagaacatccggggaaaggacaag
caccaggcaagaatttatgttcaagcatttcctgaatgggtagagcatatcaatgacact
gaggtggacataggcagcgacctctactggccttgcgtggccacagggaagcccattcct
accatcaggtggctgaaaaatggatacgcgtatcataaaggagaactgagactgtatgat
gtgacttttgacaatgctgggatgtaccagtgcatagcagaaaatgcgtatgggtccatt
tatgcaaacgcggagctcaagatcctggctttagctccaacttttgaaatgaatcctatg
aagaaaaagatcttggctgcgaaaggaggaagggttatcattgagtgtaaacccaaggct
gcaccaaaacccaagttttcatggagcaaagggacagagtggctcgtcaacagcagcaga
atactcatatgggaagatggtagcttggaaatcaataatattacaagaaatgatggcgga
atctacacgtgctttgcagaaaataacagagggaaagctaatagtactgggactctggtg
atcacaaatcccacacgaatcattttggccccaatcaatgctgacatcactgttggggaa
aatgccaccatgcagtgtgctgcatctttcgatcctgccttggacctcacgtttgtgtgg
tccttcaatggctacgtgattgactttaacaaagaaattactcatattcattaccagagg
aattttatgctcgacgccaatggggaactgctcatccgaaatgcgcagctgaaacacgca
ggcaggtacacgtgcacggcccagacaatcgtggacaattcctcggcttcagctgacctt
gtcgtacgaggccccccaggccctccaggaggcctgagaatagaagacatcagagctacc
tctgtggcactgacttggagccgtggttcagacaatcacagccctatctctaaatacact
atccagaccaagacgattctctcagacgactggaaagatgcaaagacagatcccccaatc
attgaaggaaatatggagtcagccaaagcagtggatttgatcccatggatggagtatgaa
tttcgagtggtggcgaccaatactttagggaccggagagcccagcataccctcaaacagg
atcaaaacagacggtgctgcaccaaatgtggctccctcagatgtaggtggtgggggcgga
accaacagagagctgacaataacgtgggcgcctttgtcgagagagtaccattacggtaac
aattttggttacatagtggcatttaagccatttgatggagaagagtggaagaaagttact
gtgactaacccagacactggccgctatgtccacaaagatgagaccatgaccccttctacc
gcgtttcaagtcaaagtgaaagcattcaacaataaaggagatgggccctacagccttgta
gctgtcatcaactctgcacaagacgctcccagtgaagcccccacagaggtaggggtcaaa
gtgttatcatcctctgagatatctgtgcattggaagcatgtgttagagaaaattgtggaa
agctatcagattcggtactgggctgggcatgacaaagaaacagcagcacacagagttcag
gtcaccagccaggagtactcagtcaggctggagaaccttctgcctgacacccagtacttc
attgaagtgggagcctgcaacagtgccgggtgcggaccttctagtgacgtgatcgagacc
ttcaccagaaaagcccctcccagccaaccaccaaggatcatcagttctgtgaggtctggc
tcccggtatataatcacatgggatcacgttgtggcactatccaatgaatctactgtgaca
ggctacaagatactctatagaccggatggccagcatgacggcaagctgttctcaacccat
aaacactccatagaagtccccatccccagagacggagagtatgttgtcgaggttcgagca
cacagtgacgggggagacggagtcgtgtctcaagtcaaaatttcaggtgtgtccacgctg
tcttcgggtctcctcagcttgctcctgccctcccttggctttcttgtctactcggaattc
tga
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