Mus pahari (shrew mouse): 110334674
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Entry
110334674 CDS
T05929
Symbol
Col14a1
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110334674 (Col14a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mpah00535
]
110334674 (Col14a1)
Proteoglycans [BR:
mpah00535
]
Extracellular matrix (ECM) proteoglycans
Others
110334674 (Col14a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
vWA_SIBA-E
VWA_3
Motif
Other DBs
NCBI-GeneID:
110334674
NCBI-ProteinID:
XP_021072159
Ensembl:
MGP_PahariEiJ_G0019808
LinkDB
All DBs
Position
17:21229488..21444597
Genome browser
AA seq
1794 aa
AA seq
DB search
MMVWQSKMRDWLILAFLAVACFCTIVRGQVAPPTRLRYNVISHDSIQISWKAPRGKFGGY
KLLVAPASGGKTNQMNLQNTATKAIIQGLLPEQNYTVQLIAYYKDKESKPAQGQFRIKDL
EKRKDPTKPKVKVVDKGNGSKPTSPEEVKFFCETPAIADIVILVDGSWSIGRFNFRLVRN
FLENLVTAFNVGSEKTRIGLAQYSGDPRIEWHLNAFNTKDEVIDAVRSLPYKGGNTLTGL
ALNFIFENSFKPEAGSRSGVSKIGILITDGKSQDDIIPPSRNLRESGVELFAIGVKNADL
SELQEIASEPDSTHVYNVAEFDLMHTVVESLTRTVCSRVEEQDKEIKASALATIGPPTEL
ITSEVTARSFMVNWTHSSGKVEKYRVVYYPTRGGKPEEVVVDGSVSSIVLKNLMSSTEYQ
IAVFAVSAHTASEGLRGTETTLALPMASDLELYDVTENSMRVRWDAVPGATGYLILYAPL
TEGLAGDEKEMKIGETHTDIELSGLFPNTEYTVTVYAMFGEEASDPATGQATTLPLTPPR
NLRISNVGSNSARLTWDPASGKISGYRIVYTSADGTEINEVEVDPVTTFPLKGLTPLTEY
SIAIFSIYEEGQSLPLAGEFTTEEVPAQQYLEIDEVKTDSFRVTWHPLSAEEGQHKLMWI
PVYGGKTQEVALKEEQDSYVIEGLDPGTEYEVSLLAVLDDGSESEVVTAVGTTLDDFWTE
APTTVDPTNPVTSVLQTGIRNLVVDDETATSLRVTWDISDSNVEQFRVTYLTAQGGPMEE
VVMVPGVQNSLLLKALLPNTEYKVTVTPVYTVGEGVSVSAPGKTLPSSGPQNLRVSEEWY
NRLRITWDPPSGPVKGYRIVYKPVSVPGQTLETFVGADINTIVMTNLLSGMDYNVKIFAS
QAAGFSDALTGLVQTLFLGVTDLQANQVEMTSLCARWQIHRHATAYRIVLESLQDTQAQE
STVGGGVNRHCFYGLQPDSEYKISVHTKLQELEGPSVSIMQKTQSLPTEPPTFPPTIPPA
KEVCKAAKADLVFMVDGSWSIGDDNFNKIINFLYSTVGALDKIGADGTQVAMVQFTDDPR
TEFKLDAYKTKETLLDAIRHISYKGGNTKTGKAIKHVRDTLFTSDSGTRRGIPKVIVVIT
DGRSQDDVNKISREMQADGFNIFAIGVADADYSELVQIGSKPSSRHVFFVDDFDAFKKIE
DELITFVCETASATCPMVHKDGVDLAGFKMMEMFGLVEKDFSAVEGVSMESGTFNLFPCY
QIHKDALVSQPTKYLHPEGLPSDYTMTFLFRILPDTPQEPFALWEILNKNSEPLVGIILD
NGGKTLTYFNYDYTGDFQTVTFEGPDIRKMFYGSFHKLHVVVSKTLAKVVVDCKEVGQKA
INASANITSDGVEVLGRMVRSRGPNGNSAPFQLQMFDIVCSTSWASKDRCCELPGLRDEE
SCPDLPRSCSCSETNEVALGPAGPPGGPGLRGPKGQQGEQGPKGPEGPRGETGPAGPQGP
PGPQGPSGLSIQGMPGMPGDKGDKGDAGLPGPQGVPGGVGSPGRDGSPGQRGFPGKDGSS
GPPGPPGPIGIPGAPGVPGITGSMGPQGALGPPGVPGAKGERGERGDLQSQAMVRAVARQ
VCEQLIQSHMARYTAILNQIPSQSSSIRTIQGPPGEPGRPGSPGTPGEQGPPGTPGFPGN
AGVPGTPGERGLTGVKGEKGNPGIGTQGPRGPPGPAGPSGESRPGSPGPPGSPGPRGPPG
HLGVPGPQGPSGQPGYCDPSSCSAYGVGASHPDQPEFTPVQDEQEAMDLWSAGI
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgatggtttggcagtctaagatgcgggactggctgattctggcttttttggcggttgct
tgcttctgcaccatcgtcaggggacaagtggctccacccacaaggttaagatataatgtg
atttcccacgacagtatacagatttcatggaaagcaccaagagggaaatttgggggctac
aaactgctcgtggctccagcttcagggggaaagacgaaccagatgaatcttcagaacact
gcaacaaaagcaattattcaaggccttctgccagaacagaactacacagttcaactcatt
gcctactataaagacaaggaaagcaagccagctcaaggccagttcagaattaaagattta
gagaaaagaaaggatccaacgaagcccaaagtcaaggttgtggacaaaggaaacggaagt
aaaccaacatcaccagaagaggtaaaattcttctgtgagactccagccatcgctgacatt
gtcatcctggtggatgggtcgtggagtattgggagattcaacttcaggctagtgcgcaat
ttcttggaaaacctggtcacagcattcaacgtgggctcagaaaagacaagaatcggcttg
gcacagtacagtggggaccccagaatagagtggcacttgaatgcctttaacacaaaagat
gaggtgattgatgctgtccgaagccttccatacaaaggaggaaataccctaacaggtctt
gctttgaactttatttttgagaatagctttaaaccagaagcaggatcgaggagtggagtt
tccaagattggcattctgatcacagatggaaaatcccaggatgacattatcccaccatct
agaaacctccgtgagtctggtgtagagctgtttgccataggggttaaaaatgcagacctg
agtgagctgcaggagatcgcctctgagccagacagcactcatgtatacaatgttgctgag
tttgacctgatgcacacagtggtggagagcctgacccggaccgtgtgctctagagtggaa
gaacaggacaaggagattaaagcttcagcccttgccaccatcggaccacctaccgagctg
atcacttctgaagtcaccgcccggagctttatggttaactggacccactcttcaggaaaa
gtggaaaaatacagagttgtgtattatcccaccagaggtggaaagccggaggaggtggtg
gtggatgggagtgtatcttccatagtgttgaaaaacttgatgtcttccaccgaataccag
atagcagtgtttgcagtatctgcccacacagctagtgaaggcctgcgggggacagagacc
acgttggccttgcccatggcttccgacctcgagctgtacgatgtgactgagaacagcatg
cgtgtcaggtgggatgcggtgcctggagccacaggctatctgatcctctatgcccctctc
acggaaggtctggccggagatgagaaagagatgaaaatcggagagacacatacagacatt
gaactgagtgggctattccccaatacagaatatacagtcactgtgtatgccatgtttgga
gaagaggccagcgatcctgctacaggacaagcgacaaccctacccttaaccccaccaaga
aatttgaggatctccaatgttggctctaacagcgctcggttaacctgggatccggcatcg
ggaaagatcagtggttacagaattgtgtataccagtgcagatgggacagaaatcaatgag
gttgaagtcgatcctgtcactacattccctctgaaaggcttgacccccctcacggagtac
tccattgcaattttctccatctacgaggagggccagtccttgcccctggctggagagttc
accacagaggaagttcccgcccagcaatacttggaaattgatgaggtgaagacagacagt
tttcgagtgacctggcatccgctctctgctgaggaggggcagcacaaactgatgtggatt
ccggtctatggcgggaagacccaggaggttgccctcaaagaagagcaggactcttatgtt
attgaaggcctggatcctggcacggagtacgaagtctccctgttagctgtgctcgacgac
ggaagcgagagtgaggtggtgaccgcggtggggaccacacttgatgatttttggactgaa
gcacccacaaccgtagaccctaccaaccctgtgacttcagttctccagacaggaatcaga
aacctggttgtagatgatgaaactgctactagcctgcgggtcacgtgggacatttctgac
agcaatgtggagcagtttagggtgacctacctgacagcccaagggggccctatggaagaa
gtggttatggtgcctggagtgcaaaacagtctccttctgaaagctctacttccaaacact
gagtataaagtcacggtaacccctgtctacactgtcggagaaggcgtcagcgtctctgct
cctgggaagactttgccctcctctggtcctcaaaacttaagggtctcagaagaatggtac
aaccggttgcgcattacatgggacccaccctctggccccgtgaagggctataggattgtc
tacaaacctgtgagtgtccctggtcaaactctggagaccttcgtgggtgctgacatcaac
accattgtcatgacaaatctcctcagtggaatggactacaatgtgaagatctttgcttcc
caggcggcaggcttcagtgatgctctgactggcctcgtgcaaacactgttcttgggtgtg
acagatctccaagccaatcaggttgagatgacaagcttgtgtgctcggtggcaaatacac
cgccatgccacagcctacaggatagttctagaatcccttcaggacacacaagcacaagaa
tccactgtgggaggaggcgtaaacaggcattgcttttatggccttcagcctgattcagag
tataaaatcagtgtccacacaaagctccaggagctggagggacccagtgtgagcatcatg
cagaaaacacagtcacttcccacggaaccaccaacttttcctccaaccatcccaccagca
aaggaagtgtgtaaagctgccaaggcagacctggtgttcatggtggatggatcttggagc
ataggagatgacaatttcaataagatcatcaattttctgtatagcactgtaggagccctg
gacaagattggtgcagatggaactcaggtggcaatggttcagttcactgatgacccccga
acagaatttaaacttgatgcttacaaaaccaaagagacccttcttgatgcaattagacac
atttcctacaaaggaggaaatactaaaacaggaaaagctatcaagcatgttcgggatacc
ttatttacttcagactcagggacacggagaggcatcccaaaggtcatcgtggttataact
gatggacggtcgcaagatgatgtcaacaaaatctccagggagatgcaggcagatggtttc
aacatctttgccatcggtgtggctgatgccgactactcggagttggttcagattggcagc
aagcccagctcacggcacgtcttctttgtggatgactttgacgcctttaagaaaattgaa
gatgaattgattacttttgtctgtgaaactgcatcagcaacctgcccaatggtgcacaag
gatggagttgatcttgcaggatttaagatgatggaaatgtttggtttggttgaaaaggat
ttttctgcagtggaaggagtatctatggaatctggtaccttcaatttgttcccgtgctat
caaatccataaggatgctctggtttcccagccaacaaagtatctgcacccagaaggattg
ccttctgactatacaatgactttcctgttccggattcttcctgacacgccacaggagcca
tttgctctttgggagattttaaataaaaattctgagccgctagttgggatcattttggac
aatggtgggaaaactctaacttacttcaactatgactacactggagattttcaaactgtc
acttttgaaggacctgacatcaggaaaatgttttatggaagctttcacaagctccatgtt
gttgtcagcaagactctggccaaagtggttgttgactgtaaggaagttggccagaaggca
ataaatgcatcagcgaatatcacatcggatggtgtggaagtactagggagaatggtcaga
tcgagaggaccaaatggaaactctgcaccattccagttacaaatgtttgatatcgtttgc
tctacatcatgggccagtaaagacagatgctgcgaacttcccggtctgcgggatgaagag
tcctgcccagaccttccacgatcctgctcttgctcagaaaccaatgaagtagctctagga
ccagctggccccccaggtggtccaggactccgaggaccaaaaggccaacaaggtgaacag
ggtccgaagggaccagagggacctcggggagaaacaggtcctgcaggaccccagggcccc
cctggaccccaaggacctagcggtctgtccattcaaggcatgcctgggatgccgggtgat
aaaggagataaaggagatgctggtcttcctggcccacagggtgtccctggaggtgttggt
tcaccaggacgagatggctcaccaggccagaggggatttcccggaaaggacggatcctct
gggcctccaggaccacctgggccaattggcattcctggagcccctggcgtcccagggatc
acgggcagcatgggaccacaaggagctctggggccacctggtgtccctggagcgaaagga
gagcgaggtgaacggggagacctgcagtctcaagccatggtgagggcggtggcacgtcaa
gtgtgcgagcagctcattcagagtcacatggccaggtacacagccatcctcaaccagatc
cccagccagtcctcctctatccggaccatccagggccctcctggggagcccgggagacca
ggttcacctggaacccctggagaacaaggacccccagggaccccaggcttcccaggaaat
gcaggagttccggggaccccaggagaacgaggtctaactggtgtcaaaggagagaaagga
aatccaggcattggaacgcaaggcccaagaggtccccctgggccagcaggaccttcaggg
gaaagtcgtcctggcagtcctgggccacctggctctcctggaccaaggggtcccccgggc
cacctgggagtacctggacctcagggtccttctggccagcctgggtattgtgacccctcc
tcgtgctctgcttacggtgttggagcgtcccatccagatcagcctgagttcacaccggtc
caggacgagcaggaggccatggatctgtggagtgcgggcatctga
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integrated database retrieval system
