Mus pahari (shrew mouse): 110334691
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Entry
110334691 CDS
T05929
Symbol
Arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03082
ATP-dependent chromatin remodeling
mpah05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110334691 (Arid2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
110334691 (Arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110334691 (Arid2)
03021 Transcription machinery [BR:
mpah03021
]
110334691 (Arid2)
03036 Chromosome and associated proteins [BR:
mpah03036
]
110334691 (Arid2)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Helix-turn-helix
ARID
110334691 (Arid2)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110334691 (Arid2)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
110334691 (Arid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
110334691
NCBI-ProteinID:
XP_021072186
Ensembl:
MGP_PahariEiJ_G0020208
LinkDB
All DBs
Position
17:60942818..61061683
Genome browser
AA seq
1826 aa
AA seq
DB search
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSSVFGEEWREKTDRDFVKFWKDI
VDDNEVRDLISDRNKAHEDTPGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
SNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVTSTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLIEHPSSSHQVLSE
IRPQAIEQVQTQTHIASGPASRAVVAQHAAPPPGIVEIDSEKFACQWLNAHFEVNLDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSTSSGQAHIHVIGVK
RRALPLPIQMYYQQQPISTPVVRVDAVADVSPTPSPAGIPHGSQAAGNHFQRTPVTNQSS
NLTATQMSFPVQGIHTVAQTVSRIPPNPSVHTHQQQNSPVTIIQNKAPIPCEVVKATVIQ
NSVPQPAVPGSISVGGAPAQSSVVQNHSAGPQPVTVVNSQTLLHHPSVMPQPSPLHTVVP
GQIPSGTPVTVIQQTVPQSHIFGRVQSIPACTSTVSQGQQLITTSPQPMHTSSQQTAAGS
QPQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQVVTIAGVPSPQPSRVGFQNIAPKP
LPSQQVSSTVVQQPIQQPQQPAQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQAV
QLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTLQSQGPPPTVSQMLSVKRQQQQQHSPA
APTQQVQVQQPQQVQVQVQPQQTSAGVAQPASNESSLIKQLLLPKRGPSTPGGKLILPAP
QIPPPNNARAPSPQVVYQVANNQAAGFGVQGQTPAQQLLVGQQNVQLVQSAMPPAGGVQT
VPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNAAQLIAPAGLS
MSGAQAGAGLQVQTLPAGQSACTTAPLPFKGDKIICQKEEEAKEATGLHVHERKIEVMEN
PSCRRGTTNTSNGDTSESEIQVGSLLNGRKYSDSSLPPSNSGKLQSETNQCSLISNGPSL
ELGENGASGKQNSEPVDMQDVKSDLKKTLVNGICDFDKGDGSHLSKNIPNHKTSNHVGNG
EISPVEPQGTSGATQQDTAKGDQLERVSNGPVLTLGGSPSTSSMQEAPSVATPPLSGTDL
PNGPLASSLNSDVPQQRPSVVVSPHSTAPVIQGHPVIAVPHSGPRVAPSALSSDARSTNG
TAECKTVKRPAEENDREAVPGIPNKVGVRIVTISDPNNAGCSATMVAVPAGADPSTVAKV
AIESAAQQKQQHPPTYMQSVAPQNTPMPPSPAVQVQGQPSSSQPSPVSASSQHADPVRKP
GQNFMCLWQSCKKWFPTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRFSFITHLQD
KHCSKDALLAGLKQDEPGQVANQKSSTKQPAVGGTGSAPRAQKAIASHPSAALMALRRGS
RNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVLAISNMEAS
STLAKCLYELNFTVQSKEQEKDSEML
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgacggggaaggcgcctccggacgagcggaggaagggactggctttcctg
gacgagctgcggcagttccaccacagcagagggtcgccgtttaagaagatccctgcggtg
ggtgggaaggagctggatcttcacgggctctacaccagagtcactactttaggcggattc
gcgaaggtttctgagaagaatcagtggggagaaattgttgaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttacgttatctagaaaagtat
gagaaagtgcatcactttggggaagacgatgatgaggtaccaccaggcaatccaaagcca
cagctccctattggtgcaatcccatcttcctacaattaccagcagcacagtgtgtcagat
tatctacgtcaaagttatgggttatctatggattttaattcgccaaatgattataataaa
ctggtgctttcactgttatctggactcccaaatgaagtggacttcgctattaatgtgtgc
actctcctatcaaatgaaagcaagcacgtcatgcagcttgaaaaagatcccaaaatcatc
actttattacttgctaatgctggggtgttcgatgacactttaggatcattctcttctgtc
tttggagaagaatggcgagagaagactgatagagactttgttaagttttggaaagacatt
gttgatgacaatgaagtgcgagatcttatttctgacagaaacaaggctcatgaagataca
ccaggagaatggatttgggaatctttatttcacccacctcgaaagctgggcattaatgac
atcgaaggacagcgggttcttcagatcgcagtgattttgcgaaacctttcctttgaggag
agcaatgttaagctcttggcagctaatcgcacctgtcttcgtttcctgttactctccgca
catagtcattttatctcattaaggcaattaggccttgacaccctaggaaacattgcagct
gagcttttactggaccctgttgatttcaaaaccactcatctgatgtttcacactgttaca
aaatgcctgatgtcaagggataggtttttaaagatgaggggcatggaaattttgggaaat
ctttgcaaagcagaggataatggtgttttgatttgtgaatacgtggatcaagattcatat
agagagataatttgtcacctcactttgcccgatgtgctgcttgtgacctcaacactagaa
gtgctgtacatgctcacagagatgggggacgtggcctgcacaaagatcgcaaaagtagaa
aagagcatagacatgctggtgtgtctggtctctatggacattcagatgtttggacctgac
gcacttgctgcagtgaagctcattgagcatccgagttccagtcaccaagttttatctgaa
attaggccgcaagccatagagcaggtccaaacccagacccacatagcatctggtccagct
tccagagcagttgtagcacagcatgctgccccccctccgggaatcgtggaaatagacagt
gagaagttcgcttgtcagtggctaaatgctcattttgaagtaaacctagactgttccgtc
tctcgggcagaaatgtattcagaatatctctcaacttgcagtaaattagctcgcggtggt
atcctcacatcaactgggttttacaagtgtcttagaacagtttttccaaatcatacagtg
aagagagtagaagattccactagcagtgggcaggcgcatatccatgtcataggagtgaag
cggcgggctctcccgctccccatccagatgtactatcagcagcagccgatttccactcct
gttgtccgtgttgatgctgttgctgatgtatctccaactccttcacctgcaggaatccct
catggatcacaggctgcagggaatcattttcagaggactcctgtcaccaatcaatcttca
aatttgactgcaacacaaatgtcttttccagtacaaggcattcatactgtggcacagact
gtttctagaattccaccaaatccttcagttcatacccaccagcaacaaaattctccagta
actatcattcagaataaagctccaattccttgtgaagttgttaaggcaacagtaatccag
aactctgtgccccagccggccgttcctgggagtatctctgttggaggggcacctgcacag
agctctgtggttcagaaccatagtgcagggccacagcctgttacagttgtaaattctcag
acattgcttcaccatccctctgtgatgccacaaccatctccactacacacagtggtgcca
ggacagatcccttcaggcactcctgtcacagtaatccagcagactgtgccacagagtcat
atatttggacgagtacagagcataccagcatgtacatctacagtttcacagggtcaacag
ttaatcaccacatcaccacagcctatgcacacttcatctcaacagacagcagctggtagc
cagccacaagacactgttatcatagcacccccacagtatgtaacaacttctgcatccaat
attgtctcagcgacttcagtacagaatttccaggtagctacgggacaggtggttaccata
gctggtgttccgagcccacagccctccagggtaggattccagaacattgcgcccaagcca
ctaccttctcagcaagtttcatcaacagtggtacagcagcctattcaacagccacagcag
cctgcccagcagagtgtagtgattgtgagccagccagcacagcaaggccagacgtacgca
ccagccattcaccaaatcgttcttgctaaccctgcagctctcccagccggccaggcagtt
cagctaactggacaaccaaacataactccatcgtcatcaccatcacctgtcccggctact
aataaccaagtccctactgccatgtcatcttcttccacccttcagtcacagggaccacca
cctactgtcagtcagatgctatctgtgaagaggcagcagcagcagcagcattcaccagca
gcgccaacacagcaggttcaggttcagcagccacagcaggtacaggtgcaggttcagcct
cagcaaacaagtgcaggggttgctcagcctgcttccaatgagtctagtctgatcaagcag
ctgctgctgccaaagcggggtccttcaaccccagggggcaagcttatcctcccagcccca
cagattcctccccctaacaatgctagagctcccagccctcaggtggtctaccaggtggcc
aataaccaagcagctggttttggagtgcaggggcaaactccggctcagcagctattggtt
gggcagcaaaatgttcagttggtccaaagtgcaatgccacccgcagggggagtgcaaacc
gtgcccatttcgaacttacaaatattgccgggtccactgatctcaaacagcccagcaacc
attttccaagggacttctggcaaccaggtaactataacagttgtgccaaataccagtttt
gcaactgcgactgtgagtcagggaaatgcggctcagctcattgcgccagccggtcttagc
atgagcggagcgcaggcaggagctggacttcaggtgcagacgcttccagccggacaatcg
gcgtgtaccactgctcccctcccgttcaaaggcgataagatcatttgccaaaaggaggag
gaagcaaaggaagcaacaggtctacatgttcatgaacggaaaattgaggtcatggaaaat
ccatcctgtcgtcgaggaaccacaaacaccagcaatggggatacaagtgagagtgaaatc
caggtgggaagtcttttaaatgggagaaagtatagtgactcaagtctacctccttcaaac
tcagggaaacttcagagtgagactaaccagtgctcactaatcagcaatgggccatcattg
gagttaggtgagaatggagcatctggaaaacagaactcagaaccagtagacatgcaggat
gttaaaagtgatctgaaaaaaaccctcgttaatggaatctgtgattttgataaaggagat
ggttctcatttaagcaaaaacattccaaatcacaaaacttctaatcatgtaggaaatggt
gagatatctccagtagaaccgcaagggacttcgggtgccactcagcaagatactgccaaa
ggtgaccaactagaaagagtttctaatggacctgtgttaactctgggtgggtcaccgtcc
acaagcagtatgcaagaagccccaagtgtggcgacaccgccgttgagtggtaccgacctg
cctaacggacctctagcttcaagtttgaattcagatgtgcctcagcaacgcccaagtgta
gttgtctcaccacattctacagcccctgtcatacaggggcatccagtcatagcagttccc
cactcaggacctagagtggccccttctgctctatcatctgatgcgcggtctacaaacggc
acggccgagtgcaaaactgtaaagaggccggcagaggagaatgatagggaagctgtcccg
ggaattccaaataaagtgggggttagaattgttacaatcagcgaccccaacaatgctggc
tgcagtgcaaccatggttgcggtaccagctggagcggacccaagcactgtagcgaaagta
gcaatagaaagcgctgctcagcaaaagcagcagcatccaccaacctacatgcagagtgtg
gccccgcagaacactcctatgccaccttcaccagctgtacaagtgcagggccagcctagc
agttctcagccttctccagtcagtgcatccagtcagcatgcagatccagtgagaaaacct
gggcagaacttcatgtgtctgtggcagtcttgtaaaaagtggtttccaaccccctcacaa
gtgttctatcatgcagctactgaacatggagggaaagacgtgtacccggggcagtgtctg
tgggaaggctgtgagcctttccagcggcagaggttctctttcattacccacttacaggat
aagcactgttcaaaggatgctctgcttgcaggattaaagcaagatgaaccaggacaagtg
gcaaatcaaaaatcttctaccaagcagcccgctgtggggggcacaggctctgctcccaga
gcccagaaggccattgcaagtcaccccagtgctgcactcatggctctgcggagaggctcg
aggaaccttgtcttccgggactttacagatgaaaaagagggaccaataactaaacacatc
cgactaacagctgccttaatattaaaaaatattggtaaatactccgagtgtgggcgcaga
ttgttaaagagacatgaaaacaacttatcagtgctagccattagtaacatggaagcttcc
tctacccttgccaaatgcctttatgaacttaattttacagttcagagtaaagaacaagaa
aaagactcagaaatgctgtag
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integrated database retrieval system
