Mus pahari (shrew mouse): 110334917
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Entry
110334917 CDS
T05929
Symbol
Ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpah03041
]
110334917 (Ddx17)
Enzymes [BR:
mpah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110334917 (Ddx17)
Spliceosome [BR:
mpah03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110334917 (Ddx17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110334917
NCBI-ProteinID:
XP_021072603
Ensembl:
MGP_PahariEiJ_G0020019
LinkDB
All DBs
Position
17:complement(44661810..44682004)
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AA seq
652 aa
AA seq
DB search
MRGGGFGDRDRDRDRGGFGARGGSGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVEHP
EVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQC
QGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQ
VQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRC
TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINV
GNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR
RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSS
EDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGG
GGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSTSYRDRSETDRASYANGS
GYGSPNSAFGAQAGQYTYAQGTYGAAAYGTSGYTAQEYAAGTYGASSAASAGRSSQSSSQ
QFSGIGRSGQQPQPLMSQQFAQPPGAANMIGYMGQTAYQYPPPPPPPPPSRK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggaggcggctttggggatcgggaccgtgacagggaccgtggagggtttggagca
agaggtggtagtgggcttcccccgaagaaatttggtaatcctggggagcggttacgaaaa
aagaagtgggatttgagtgaactccctaagtttgagaagaatttttacgtcgaacatcca
gaagtagcaagactgactccgtatgaggttgatgagctacggcggaagaaagagattaca
gtgagagggggagatgtttgtccaaaacctgtctttgccttccatcatgctaactttcca
cagtatgtgatggatgtgctgatggatcagcactttacagaaccaactcccattcagtgc
cagggatttcctttggctcttagtggcagggatatggttggcattgcacagactggctct
gggaagacattggcgtatttgctgcctgcgattgttcatataaaccaccagccatacttg
gaaagaggagatggtccgatttgtctagtgctggctcctaccagagagcttgctcagcag
gtgcagcaggtggctgatgattatggaaaatgctctaggttgaagagtacgtgcatttac
ggaggtgctcctaaaggtccccagattcgagacttggaaagaggtgttgagatttgcata
gccactcctgggcgcctaatagatttcctggagtcaggaaagacaaaccttcgccgatgt
acttaccttgtgttggatgaggctgaccggatgcttgatatgggctttgagccccagatc
cgtaaaattgttgatcaaatcaggcctgaccggcagacactgatgtggagtgcaacgtgg
ccgaaagaagtgaggcagcttgcagaggatttcctgagggactacacccagatcaatgtg
ggcaatctggagctgagtgccaaccacaacatcctacagattgtggatgtctgtatggag
agtgaaaaagaccacaaattgatccagctgatggaggaaatcatggcagaaaaggaaaat
aagactataatatttgtggagacaaagagacgctgtgatgacctcactcgaagaatgcgc
agagatggttggcctgctatgtgtatccatggagacaagagtcaaccagaaagagattgg
gtacttaatgagttccgatctggaaaggctcctatcctcattgccacggatgtagcctcc
cgtgggctagatgtggaagatgtcaagtttgttatcaactacgattatccaaacagctca
gaggattatgttcaccgtattggccgaacggcccgcagcaccaacaagggcactgcctat
actttctttaccccgggcaacctgaagcaggctagagagctgatcaaagtattggaagag
gccaatcaagccatcaatccaaaattgatgcagcttgtggaccacagaggtggcggcgga
ggagggggtaagggaggccgctcacgataccggactacttcttcagccaacaatcccaat
ctgatgtatcaggatgagtgtgaccggaggcttcgaggggtcaaggatggtggccggaga
gattctacaagctacagggatcgtagtgaaaccgatagagccagttatgctaatggcagt
ggctatggaagcccgaattctgcctttggggcacaagcaggccaatacacctatgctcaa
ggcacctatggggcagctgcctatggcaccagtggctacacggcgcaggagtatgctgct
ggcacttacggggcgagcagtgccgcctcagcagggaggagctcccagagctccagccag
cagttcagtggaataggccggtctgggcagcagccacagccactgatgtcacagcagttt
gcacagcctccaggagctgccaatatgataggctacatggggcagactgcttaccagtac
cctcccccccctcctcctcctcctccatctcgtaaatga
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