Mus pahari (shrew mouse): 110334930
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Entry
110334930 CDS
T05929
Symbol
Sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04820
Cytoskeleton in muscle cells
mpah05410
Hypertrophic cardiomyopathy
mpah05412
Arrhythmogenic right ventricular cardiomyopathy
mpah05414
Dilated cardiomyopathy
mpah05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110334930 (Sntb1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
110334930 (Sntb1)
05412 Arrhythmogenic right ventricular cardiomyopathy
110334930 (Sntb1)
05414 Dilated cardiomyopathy
110334930 (Sntb1)
05416 Viral myocarditis
110334930 (Sntb1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
110334930
NCBI-ProteinID:
XP_021072636
Ensembl:
MGP_PahariEiJ_G0019811
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All DBs
Position
17:complement(21560530..21825145)
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AA seq
537 aa
AA seq
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MAVAAAAVAAPVGGGGARAQRSGLLEVLVRDRWHKVLVNLSEDALVLSCEEGAAAYNGIG
NATNGSFCRGSGTGHPGTSVTQAPDSPAGVRTAFTDLPEQVPESISNQKRGVKVLKQELG
GLGISIKGGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGADLRDATHDEAVQALK
RAGKEVLLEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGGGSADPLSSQPFSFHRDR
KSIPLKMCYVTRNMTLADPENRQLEIHSPDAKHTVILRSKDSATAQAWFNAIHSNAGDLL
TRVVADIREQLGKTGIAGSREIRHLGWLAEKVPGESEKQWKPALVVLTEKDLLIYDSMPR
RKEAWFSPVHSYPLLATRLVHSGPGKGSPQAGMDLSFATRTGTKQGIETHLFRAEISRDL
SHWTRSIVQGCHNSAELTAEITTACTYRNQECRLTIHYDNGFSISTEPQDGAFPKTIIQS
PYEKLKMSSDDGIRMLCLDFGGKEGEIQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcagcggctgtggctgcgccggttggcggtggaggcgcccgggcgcag
cggagcggactgctggaagttttggtgcgggatcgctggcataaagttctggtgaacttg
agcgaggacgccctggtgttgagctgcgaggagggcgctgcggcgtacaacggcataggg
aatgccaccaatggttcgttctgcaggggctccgggaccgggcacccgggcaccagtgtg
actcaagccccggactctcccgccggggtccgcaccgccttcaccgacctcccggagcag
gtgcctgagtccatctcaaaccagaagaggggcgtgaaggtgctgaagcaggagctgggc
gggctgggcattagcatcaaagggggcaaggaaaacaagatgcccatactcatcagcaag
atcttcaagggtctggcagcggatcagacccaagccctgtacgtgggcgatgccatcctg
tcggtgaacggagcagacctgcgggacgccacccacgacgaggcagtgcaggcgttgaag
cgcgcaggcaaggaagtgctgctggaagtgaagtatatgagagaagccacaccttacgtg
aagaaagggtccccagtgtctgagatcggatgggaaacacctccacctgagtccccaaga
ttagggggcggttctgcagatcctctgtcatcccagcccttctccttccatagagaccgg
aaaagcatccccctcaagatgtgttatgtcacccggaacatgactttggctgaccctgaa
aacaggcagctagaaattcactcgccagatgctaagcacacagtgattctgagaagtaag
gactctgccacggcccaagcctggttcaatgccattcattccaatgctggtgacttgctg
acccgtgtggttgctgacatcagggagcagctggggaagacaggcattgctggcagtcgt
gagatccggcatcttggctggcttgcagaaaaggtgcccggagagagcgagaaacagtgg
aaaccagccctggttgttctgactgagaaagatcttttgatctacgacagcatgccacgg
aggaaagaggcctggttcagcccggtgcattcgtacccacttcttgctaccaggctggtc
cattcaggtccagggaaaggatcaccccaggctggtatggatctgtcctttgcaacacga
actggcaccaagcaaggaattgaaacacatctcttcagggcggagatcagcagggacctc
tcccactggacgaggagcatagtacaagggtgtcacaattcagcggagctcactgccgaa
atcaccacagcctgcacctacagaaaccaggaatgccgcttgaccatacattatgacaat
ggattttctatttccactgagcctcaggatggtgcctttcccaagacaatcatacagtcc
ccttacgagaagctcaaaatgtcttcggatgatggaatcaggatgctctgtttagacttt
ggaggcaaagaaggagagattcaactggaccttcactcctgccccaagccgatcgttttc
atcatccactcctttctgtctgctaagataacacgactgggcttggtggcctga
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