Mus pahari (shrew mouse): 110334979
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Entry
110334979 CDS
T05929
Symbol
Shank3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
110334979 (Shank3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
SH3_2
Ank_3
PDZ_6
Ank_5
SH3_9
PDZ
SH3_1
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
110334979
NCBI-ProteinID:
XP_021072709
Ensembl:
MGP_PahariEiJ_G0020179
LinkDB
All DBs
Position
17:54462184..54521883
Genome browser
AA seq
1730 aa
AA seq
DB search
MDGPGASAVVVRVGIPDLQQTKCLRLDPTAPVWAAKQRVLCALNHSLQDALNYGLFQPPS
RGRAGKFLDEERLLQDYPPNLDTPLPYLEFRYKRRVYAQNLIDDKQFAKLHTKANLKKFM
DYVQLHSTDKVARLLDKGLDPNFHDPDSGECPLSLAAQLDNATDLLKVLRNGGAHLDFRT
RDGLTAVHCATRQRNAGALTTLLDLGASPDYKDSRGLTPLYHSALGGGDALCCELLLHDH
AQLGITDENGWQEIHQACRFGHVQHLEHLLFYGANMGAQNASGNTALHICALYNQESCAR
VLLFRGANKDVRNYNSQTAFQVAIIAGNFELAEVIKTHKDSDVVPFRETPSYAKRRRLAG
PSGLASPRPLQRSASDINLKGDQPAASPGPTLRSLPHQLLLQRLQEEKDRDRDGEQENDI
SGPSAGRGGHNKISPSGPGGSGPAPGPGPASPAPPAPPPRGPKRKLYSAVPGRKFIAVKA
HSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVKGRTGWFPADCVEEVQMRQYDTRHETRE
DRTKRLFRHYTVGSYDSLTSHSDYVIDDKVAILQKRDHEGFGFVLRGAKAETPIEEFTPT
PAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQVVGLIRQGGNRLVMKV
VSVTRKPEEDGARRRAPPPPKRAPSTTLTLRSKSMTAELEELASIRRRKGEKLDEILAVA
AEPTLRPDIADADSRAATVKQRPTSRRITPAEISSLFERQGLPGPEKLPGSLRKGIPRTK
SVGEDEKLASLLEGRFPRSTSMQDTVREGRGIPPPPQTAPPPPPAPYYYDSGPPPTFSPP
PPPGRAYDTVRSSFKPGLEARLGAGAAGLYDPGTPLGPLPYPERQKRARSMIILQDSAPE
VGDVPRPAPAATPPERSKRRPRPSGPDSPYANLGAFSASLFAPSKPQRRKSPLVKQLQVE
DAQERAALAVGSPGPVGGSFAREPSPTHRGPRPGGLDYSSGEGLGLTYGGPSPGPVKERR
LEERRRSTVFLSVGAIEGSPPSADLPSLQPSRSIDERLLGTGATTGRDLLLPSPVSALKP
LVGGPSLGPSGSTFIHPLTGKPLDPSSPLALALAARERALASQTPSRSPTPVHSPDADRP
GPLFVDVQTRDSERGPLASPAFSPRSPAWIPVPARRETEKPPREERKSPEDKKSMILSVL
DTSLQRPAGLIVVHATSNGQEPNRLGAEEERPGTPELAPAPMQAAAVAEPMPSPRAQPPG
SIPADPGPGQGSSEEEPELVFAVNLPPAQLSSSDEETREELARIGLVPPPEEFANGILLA
TPPPGPGPLPTTVPSPASGKPSSEMPPAPESAADSGVEEADTRSSSDPHLETTSTISTVS
SMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKSPLGKGPVTFRDPLLKQSSDS
ELMAQQHHAASTGLASAAGPARPRYLFQRRSKLWGDPVESRGLPGPEDDKPTVISELSSR
LQQLNKDTRSLGEEPVGGLGSLLDPAKKSPIAAARLFSSLGELSTISAQRSPGGPGGGAS
YSVRPSGRYPVARRAPSPVKPASLERVEGLGAGVGGAGRPFGLTPPTILKSSSLSIPHEP
KEVRFVVRSVSARSRSPSPSPLPSPSPGSGPSAGPRRPFQQKPLQLWSKFDVGDWLESIH
LGEHRDRFEDHEIEGAHLPALTKEDFVELGVTRVGHRMNIERALRQLDGS
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atggacggccccggggccagcgccgtggtcgtgcgcgtcggcatcccggacctgcaacaa
acgaagtgcctgcgtctggacccaaccgcgcccgtgtgggccgccaagcagcgtgtgctc
tgcgccctcaatcatagccttcaggacgcgctcaactacgggctattccagcctccttcc
cggggtcgcgccggcaagttcctggatgaagagcggctcctacaggactacccgcctaac
ctggacacgcccctgccctatctggagttccgatacaagcggagagtttatgcccagaac
ctcatagatgacaagcagtttgcgaagttgcacacaaaggcaaacctgaagaagttcatg
gactatgtccagctacacagcacagacaaggtggcccgcctgctggacaaggggctggac
cccaatttccatgaccctgactcaggagaatgccctctgagcctggcggcgcagttggac
aacgccaccgacctcctgaaggttcttcgcaacggcggtgctcatctggacttccggacc
cgagatgggctgacggccgtccactgtgctacccgccagcggaacgcaggggctctgacg
accctgctggacctgggggcttcgcccgactacaaggacagccgcggcctgacgcccctg
taccatagtgccctagggggcggggatgccctctgctgtgagctgcttctccatgatcac
gcacagctggggatcactgatgagaatggttggcaagagatccatcaggcctgtcgcttt
ggacacgtgcagcacctggagcacctgttgttctatggggccaacatgggtgctcagaat
gcctcggggaacacagccctgcacatctgtgccctctacaaccaggagagctgcgcgcgc
gtcctgcttttccgtggtgccaacaaggacgtccgcaattacaacagccagacagccttt
caggtggccattattgcagggaactttgagcttgcggaggtaatcaagacccacaaagac
tcggatgttgtaccattcagggaaacccccagctatgcaaagcgacgacggctggctggc
ccgagtggcctggcatccccacggccgttacagcgctcagccagtgatatcaacctgaaa
ggtgatcagcccgcagcttctcccgggcccactctccgaagcctccctcatcaattgctg
ctccagaggcttcaggaggagaaagaccgtgacagggatggtgaacaggagaatgacatc
agcggcccctcagcaggcaggggtggccacaacaagatcagccccagcgggcccggcgga
tccggccccgcgcccggccccggcccggcgtctcccgcgccccccgcgccgccgccccgg
ggcccgaagcggaaactttacagtgccgtccccggccgcaagttcatcgctgtgaaggcg
cacagcccgcagggcgagggcgagatcccgctgcaccgcggcgaggccgtgaaggtgctc
agcattggggagggcggcttctgggagggaaccgtgaagggccgtacaggctggttccca
gctgactgtgtggaagaagtgcagatgcgacagtatgatacccggcatgaaaccagagag
gaccggacgaagcgtctcttccgccactacactgtgggttcctatgacagcctcacttca
cacagcgattatgtcatcgatgataaggtggctatcctgcagaaaagggaccatgagggt
tttggctttgtcctccggggagccaaagcagagacccccattgaggagtttacacccaca
cctgccttccctgcgctccaataccttgagtctgtagatgtggaaggtgtggcctggagg
gctgggcttcgaactggggacttcctcattgaggtgaacggagtgaacgtcgtgaaggtc
ggacacaagcaagtggtgggtctcatccgtcagggcggcaaccgcctggtcatgaaggtt
gtgtctgtgaccaggaaacccgaggaggacggtgctcggcgcagagccccaccaccccca
aagagggctcccagcaccacactgaccctgcggtccaagtccatgacggctgagctggag
gaacttgcttccattcggagaagaaaaggggagaaattggatgagatcctggccgttgcc
gcggagccgacactgaggccggacattgcagatgctgattcgagggcggccaccgtcaag
cagcggcccaccagccggaggattacccctgccgagatcagctcattgtttgagcgccag
ggcctcccaggcccagagaagctgccgggctctctgcggaaggggattccacggaccaaa
tctgtaggggaggatgagaagctggcatccctactggaagggcgcttcccacgcagcacg
tcaatgcaggacacagtgcgtgaaggtcgaggcataccacccccgccgcagaccgccccg
ccacccccacccgcgccctactactacgactccgggccaccccctaccttctctccgccg
ccaccaccgggccgggcctatgacactgtgcgctccagcttcaaaccaggcctggaggct
cgtctgggtgcgggggccgccggcctgtatgatccgggcacgcctctgggcccgctaccc
taccctgagcgtcagaagcgtgcacgctccatgatcatattgcaggactctgcgccagaa
gtgggtgatgtcccccggcctgcgcctgccgccacaccgcctgagcgctccaagcgccga
cctcggccgtcaggccctgatagtccctatgccaacctgggcgccttcagtgccagcctc
ttcgctccgtcgaaaccacagcgccgcaagagcccgctggtgaagcagcttcaggtggag
gacgctcaggagcgcgcggccctggccgtgggtagcccaggaccagtgggtggaagcttt
gcacgagaaccctctccgacgcaccgcgggccccggccgggcggccttgactacagctct
ggagaaggcctgggccttacctatggcggccctagccctggcccagtcaaggagcggcgc
ctggaggagcgacgccgttccactgtgttcctctctgtgggtgccatcgagggcagccct
cccagcgcggatctgccatccctacaaccctcccgctccattgatgagcgcctcctgggg
acaggcgccaccactggccgagatttgctgctcccctcccctgtctctgctctgaagcca
ttggtcggtggtcccagccttgggccctcaggctccaccttcatccaccctctcactggc
aaacccttggatcctagctcacccttagctcttgctctggctgcccgagagcgggctctg
gcctcgcaaacaccttcccggtcccccacacctgtgcacagccccgatgctgaccgccct
ggacccctcttcgtggatgtgcaaacccgagactctgagagaggaccgttggcttcccca
gccttctctcctcggagtccagcctggattccagtgcctgctcggagagagacagagaaa
ccccctcgggaagagcggaagtcaccagaggacaagaaatccatgatcctcagcgtcttg
gacacgtccttgcaacggccagctggcctcattgttgtgcatgccaccagcaatgggcag
gaacccaacaggctgggggctgaagaggagcgccccggtactccggagctggccccagcc
cccatgcaggcagcagctgtggcagagcccatgccaagcccccgggcccagccccctggc
agcatcccagcagatcccggaccaggccaaggcagctcagaggaggagccagagctggta
ttcgctgtgaacctgccacctgctcagctgtcctccagcgatgaggagaccagagaggag
ctggcccgaattgggctggtgccaccccctgaagagtttgccaatgggatcctgctggcc
accccgcccccagggccgggccccttgcccaccacggtacccagcccggcctcagggaag
cccagcagcgagatgccccctgcccctgagtctgcagctgactctggagtagaggaggct
gacactcgaagctccagtgacccccacctggagaccacaagcaccatttccacagtgtcc
agcatgtccaccctgagctcggagagtggggaactcacagacacccacacctcctttgcc
gacggacacacttttctactcgagaagccaccagtgcctcccaagcccaagctcaagtcc
ccgctggggaaggggccggtgaccttcagggacccgctgctgaagcaatcctcggacagt
gagctcatggcccagcagcaccacgctgcctctactgggttggcttctgctgctgggccc
gcccgccctcgctacctcttccagagaaggtccaagctgtggggggaccccgtggagagt
cgggggctccctgggcctgaagatgacaaaccaactgtgatcagtgagctcagctcccgt
ctgcagcagctgaataaagacacgcgctccttgggggaggaaccagttggtggcctgggc
agcctgctggaccctgctaagaagtcgcccattgcagcagctcggctcttcagcagcctc
ggtgagctgagcaccatctcagcgcagcgcagccccgggggcccgggcggaggggcctcc
tactcggtgcggcccagcggccggtaccccgtggcgagacgagccccgagcccagtgaaa
cccgcatcgctggagcgggtggaggggctgggggcgggcgtgggaggcgcggggcggccc
ttcggcctcacgcctcccaccatcctcaagtcgtccagcctctccatcccgcacgaaccc
aaggaagtgcgcttcgtggtgcgaagtgtgagtgcgcgcagccgctccccctcaccatct
ccgctgccctcgccttctcccggctctggccccagtgccggcccgcgtcggccatttcaa
cagaagcccctgcagctctggagcaagttcgatgtgggcgactggctggagagcatccac
ttaggcgagcaccgagaccgcttcgaggaccatgagatcgaaggcgcacacctgcctgcg
ctcaccaaggaagacttcgtggagctgggcgtcacacgcgttggccaccgcatgaacatc
gagcgtgcgctcaggcagctggatggcagctga
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integrated database retrieval system
