Mus pahari (shrew mouse): 110335350
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Entry
110335350 CDS
T05929
Symbol
Msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah01524
Platinum drug resistance
mpah03430
Mismatch repair
mpah05200
Pathways in cancer
mpah05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110335350 (Msh2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110335350 (Msh2)
09162 Cancer: specific types
05210 Colorectal cancer
110335350 (Msh2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
110335350 (Msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpah03400
]
110335350 (Msh2)
DNA repair and recombination proteins [BR:
mpah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110335350 (Msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
110335350
NCBI-ProteinID:
XP_021073087
Ensembl:
MGP_PahariEiJ_G0020939
LinkDB
All DBs
Position
18:53343554..53397226
Genome browser
AA seq
933 aa
AA seq
DB search
MAVQPKETLQLEGAAEAGFVRFFEGMPEKPSTTVRLFDRGDFYTAHGDDALLAAREVFKT
QGVIKYMGPAGTKTLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENEWYLA
FKASPGNLSQFEDILFGNNDMSASIGVMGIKMAMVDGQRQVGVGYVDSIQRKLGLCEFPE
NDQFSNLEALLIQIGPKECVLPGGETTGDMGKLRQVIQRGGILITERKRADFSTKDIYQD
LNRLLKGKKGEQINSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYM
KLDTAAVRALNLFQGSVEDTTGSQSLAALLNKCKTAQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDSELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVNQLPNVIQA
LEKYQGRYQALLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREVMDGLEKKMQSTLISAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNAAPVPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IARAKQKALELEEFQNIGTSLGCDEAEPAAKRRCLEREQGEKIILEFLSKVKQVPFTDMS
EESISAKLKQLKAEVVAKNNSFVNEIISRIKAP
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagcctaaggagacgctgcagttggaaggcgcggccgaggcgggcttcgtg
cgcttctttgagggcatgccggagaagccgagcaccacggtgcgcctcttcgaccgcggc
gacttctacacggcgcacggagatgacgcgctgctggcggcccgcgaggtgttcaagacc
cagggcgtgatcaagtacatggggccggcagggacaaagacactgcagagtgttgtgctt
agcaagatgaattttgagtcttttgtgaaagatcttcttctggttcgtcagtatcgagtt
gaagtttataagaataaagctggaaataaggcatctaaggaaaatgaatggtatttggca
tttaaggcttctcccggaaatctttctcagtttgaagacatcctgtttggtaacaatgac
atgtcagcttccattggcgttatgggtattaaaatggccatggttgatggtcaaagacag
gttggagttgggtatgtggattccatccagagaaagctaggattgtgtgagttccctgag
aatgatcagttctccaatctcgaggctcttctgattcagattggaccaaaggaatgtgtt
ttaccaggaggagagactactggagacatggggaaactgaggcaggttatccagagagga
gggattctgatcacagaaaggaagagagccgacttttccaccaaagacatttatcaggat
ctcaaccggttattgaaaggcaaaaaaggagaacagataaatagcgctgtcttaccagag
atggagaatcaggttgcagtttcatcattgtctgcagtaatcaagtttttagaactctta
tcagatgattcaaatttcggacagtttgaactggctacgtttgacttcagccagtacatg
aagttggacacggcagcagttagagccctcaaccttttccagggttctgttgaagacacc
actggctctcagtctctggccgcattattgaataaatgcaaaactgctcaaggacaaaga
ttggttaaccagtggatcaagcagccgctcatggataagaacaggatagaggagaggtta
aatttagtggaagcttttgtcgaagattcagaattgaggcagagcttacaggaggattta
cttcgacgatttccagatcttaaccggcttgccaagaaatttcagagacaagcagcgaat
ttacaagactgttaccgactgtatcagggtgtgaaccagctccccaacgtcatccaggct
ctggagaaataccaaggaagataccaggcattgttgttggcagtttttgtaactcctcta
attgatcttcgttctgatttttcaaaatttcaagaaatgatagaaacgactttagatatg
gatcaggtggagaaccacgagttccttgtaaaaccctcatttgatccaaacctgagtgaa
ctaagagaagtcatggatggcctggagaagaagatgcagtccaccttaataagtgcagcc
cgggggctcggattggaccctggaaaacagattaaattggactcaagtgcccagtttgga
tattatttccgtgtaacctgcaaggaagagaaagtccttcgtaacaacaagaacttcagc
acagtagatatccagaagaatggcgtgaagtttaccaacagtgaattgtcctctttaaat
gaagaatatacgaagaacaaaggcgagtatgaagaggcccaggatgccattgttaaagaa
attgtcaatatttcctcaggctatgtggagccaatgcagacgctcaatgatgtgctagct
cagttagatgccgttgtcagcttcgctcatgtgtcaaacgcagcacctgttccttacgta
cgaccagtcatcttggagaaaggaaaaggaagaattatattgaaggcctccaggcatgct
tgtgttgaagttcaagatgaagttgcatttattccaaatgacgtgcactttgaaaaagat
aaacagatgttccacatcattactggtcccaatatgggaggtaaatcaacatacattcgt
cagactggcgtgattgtacttatggcccaaatcgggtgttttgtgccgtgtgagtcggca
gaagtgtccattgtggattgcatcttagctcgagttggggctggtgacagtcaactgaaa
ggcgtctccacattcatggctgaaatgctggagactgcttctatcctcaggtcggcaacc
aaagattccttaataatcattgatgaactgggaagaggaacctctacctatgatggcttt
gggttagcatgggctatatcagattacattgcaacgaagattggtgccttttgcatgttt
gccacccattttcatgaacttactgctttggccaaccaaataccaactgttaataatctc
catgtcacagcgctcactacggaggagaccctaaccatgctttatcaagtgaaaaaaggt
gtctgtgatcagagtttcgggattcacgtggctgagctggctaatttcccgaggcacgtg
atagcacgtgccaagcagaaggctctggagcttgaggagtttcagaacattggaacctcg
cttggatgtgatgaagccgagccggctgcaaagagacgctgcctggaaagagagcaaggt
gagaaaattattctggagttcctgtccaaggtcaagcaagtgccctttactgacatgtca
gaggagagcatctccgcgaagctgaagcagctgaaagctgaggtggtcgcaaagaataac
agctttgtaaatgagatcatctcacggataaaggctccgtga
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