KEGG   Mus pahari (shrew mouse): 110335350
Entry
110335350         CDS       T05929                                 
Symbol
Msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah01524  Platinum drug resistance
mpah03430  Mismatch repair
mpah05200  Pathways in cancer
mpah05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    110335350 (Msh2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    110335350 (Msh2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    110335350 (Msh2)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    110335350 (Msh2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpah03400]
    110335350 (Msh2)
DNA repair and recombination proteins [BR:mpah03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     110335350 (Msh2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I AAA_27
Other DBs
NCBI-GeneID: 110335350
NCBI-ProteinID: XP_021073087
Ensembl: MGP_PahariEiJ_G0020939
LinkDB
Position
18:53343554..53397226
AA seq 933 aa
MAVQPKETLQLEGAAEAGFVRFFEGMPEKPSTTVRLFDRGDFYTAHGDDALLAAREVFKT
QGVIKYMGPAGTKTLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENEWYLA
FKASPGNLSQFEDILFGNNDMSASIGVMGIKMAMVDGQRQVGVGYVDSIQRKLGLCEFPE
NDQFSNLEALLIQIGPKECVLPGGETTGDMGKLRQVIQRGGILITERKRADFSTKDIYQD
LNRLLKGKKGEQINSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYM
KLDTAAVRALNLFQGSVEDTTGSQSLAALLNKCKTAQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDSELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVNQLPNVIQA
LEKYQGRYQALLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREVMDGLEKKMQSTLISAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNAAPVPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IARAKQKALELEEFQNIGTSLGCDEAEPAAKRRCLEREQGEKIILEFLSKVKQVPFTDMS
EESISAKLKQLKAEVVAKNNSFVNEIISRIKAP
NT seq 2802 nt   +upstreamnt  +downstreamnt
atggcggtgcagcctaaggagacgctgcagttggaaggcgcggccgaggcgggcttcgtg
cgcttctttgagggcatgccggagaagccgagcaccacggtgcgcctcttcgaccgcggc
gacttctacacggcgcacggagatgacgcgctgctggcggcccgcgaggtgttcaagacc
cagggcgtgatcaagtacatggggccggcagggacaaagacactgcagagtgttgtgctt
agcaagatgaattttgagtcttttgtgaaagatcttcttctggttcgtcagtatcgagtt
gaagtttataagaataaagctggaaataaggcatctaaggaaaatgaatggtatttggca
tttaaggcttctcccggaaatctttctcagtttgaagacatcctgtttggtaacaatgac
atgtcagcttccattggcgttatgggtattaaaatggccatggttgatggtcaaagacag
gttggagttgggtatgtggattccatccagagaaagctaggattgtgtgagttccctgag
aatgatcagttctccaatctcgaggctcttctgattcagattggaccaaaggaatgtgtt
ttaccaggaggagagactactggagacatggggaaactgaggcaggttatccagagagga
gggattctgatcacagaaaggaagagagccgacttttccaccaaagacatttatcaggat
ctcaaccggttattgaaaggcaaaaaaggagaacagataaatagcgctgtcttaccagag
atggagaatcaggttgcagtttcatcattgtctgcagtaatcaagtttttagaactctta
tcagatgattcaaatttcggacagtttgaactggctacgtttgacttcagccagtacatg
aagttggacacggcagcagttagagccctcaaccttttccagggttctgttgaagacacc
actggctctcagtctctggccgcattattgaataaatgcaaaactgctcaaggacaaaga
ttggttaaccagtggatcaagcagccgctcatggataagaacaggatagaggagaggtta
aatttagtggaagcttttgtcgaagattcagaattgaggcagagcttacaggaggattta
cttcgacgatttccagatcttaaccggcttgccaagaaatttcagagacaagcagcgaat
ttacaagactgttaccgactgtatcagggtgtgaaccagctccccaacgtcatccaggct
ctggagaaataccaaggaagataccaggcattgttgttggcagtttttgtaactcctcta
attgatcttcgttctgatttttcaaaatttcaagaaatgatagaaacgactttagatatg
gatcaggtggagaaccacgagttccttgtaaaaccctcatttgatccaaacctgagtgaa
ctaagagaagtcatggatggcctggagaagaagatgcagtccaccttaataagtgcagcc
cgggggctcggattggaccctggaaaacagattaaattggactcaagtgcccagtttgga
tattatttccgtgtaacctgcaaggaagagaaagtccttcgtaacaacaagaacttcagc
acagtagatatccagaagaatggcgtgaagtttaccaacagtgaattgtcctctttaaat
gaagaatatacgaagaacaaaggcgagtatgaagaggcccaggatgccattgttaaagaa
attgtcaatatttcctcaggctatgtggagccaatgcagacgctcaatgatgtgctagct
cagttagatgccgttgtcagcttcgctcatgtgtcaaacgcagcacctgttccttacgta
cgaccagtcatcttggagaaaggaaaaggaagaattatattgaaggcctccaggcatgct
tgtgttgaagttcaagatgaagttgcatttattccaaatgacgtgcactttgaaaaagat
aaacagatgttccacatcattactggtcccaatatgggaggtaaatcaacatacattcgt
cagactggcgtgattgtacttatggcccaaatcgggtgttttgtgccgtgtgagtcggca
gaagtgtccattgtggattgcatcttagctcgagttggggctggtgacagtcaactgaaa
ggcgtctccacattcatggctgaaatgctggagactgcttctatcctcaggtcggcaacc
aaagattccttaataatcattgatgaactgggaagaggaacctctacctatgatggcttt
gggttagcatgggctatatcagattacattgcaacgaagattggtgccttttgcatgttt
gccacccattttcatgaacttactgctttggccaaccaaataccaactgttaataatctc
catgtcacagcgctcactacggaggagaccctaaccatgctttatcaagtgaaaaaaggt
gtctgtgatcagagtttcgggattcacgtggctgagctggctaatttcccgaggcacgtg
atagcacgtgccaagcagaaggctctggagcttgaggagtttcagaacattggaacctcg
cttggatgtgatgaagccgagccggctgcaaagagacgctgcctggaaagagagcaaggt
gagaaaattattctggagttcctgtccaaggtcaagcaagtgccctttactgacatgtca
gaggagagcatctccgcgaagctgaagcagctgaaagctgaggtggtcgcaaagaataac
agctttgtaaatgagatcatctcacggataaaggctccgtga

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