KEGG   Mus pahari (shrew mouse): 110335384
Entry
110335384         CDS       T05929                                 
Symbol
Tubb4a
Name
(RefSeq) tubulin beta-4A chain isoform X1
  KO
K07375  tubulin beta
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04145  Phagosome
mpah04517  IgSF CAM signaling
mpah04540  Gap junction
mpah04814  Motor proteins
mpah05010  Alzheimer disease
mpah05012  Parkinson disease
mpah05014  Amyotrophic lateral sclerosis
mpah05016  Huntington disease
mpah05020  Prion disease
mpah05022  Pathways of neurodegeneration - multiple diseases
mpah05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    110335384 (Tubb4a)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110335384 (Tubb4a)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    110335384 (Tubb4a)
  09142 Cell motility
   04814 Motor proteins
    110335384 (Tubb4a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110335384 (Tubb4a)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    110335384 (Tubb4a)
   05012 Parkinson disease
    110335384 (Tubb4a)
   05014 Amyotrophic lateral sclerosis
    110335384 (Tubb4a)
   05016 Huntington disease
    110335384 (Tubb4a)
   05020 Prion disease
    110335384 (Tubb4a)
   05022 Pathways of neurodegeneration - multiple diseases
    110335384 (Tubb4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mpah03036]
    110335384 (Tubb4a)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mpah04812]
    110335384 (Tubb4a)
   04147 Exosome [BR:mpah04147]
    110335384 (Tubb4a)
Chromosome and associated proteins [BR:mpah03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     110335384 (Tubb4a)
Cytoskeleton proteins [BR:mpah04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    110335384 (Tubb4a)
Exosome [BR:mpah04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   110335384 (Tubb4a)
  Exosomal proteins of colorectal cancer cells
   110335384 (Tubb4a)
  Exosomal proteins of bladder cancer cells
   110335384 (Tubb4a)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 110335384
NCBI-ProteinID: XP_021073154
Ensembl: MGP_PahariEiJ_G0020794
LinkDB
Position
18:complement(24201570..24208309)
AA seq 450 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGRTAS
GGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD
AVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPK
VSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMS
GVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMF
DAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVC
DIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN
MNDLVSEYQQYQDATAEEGEFEEEAEEEVA
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgggaaatcgtgcacctgcaagccggccaatgcggcaaccagatcggagccaagttc
tgggaggtcatcagtgatgagcacggcatcgaccccactgggacctatcatggggacagt
gacctccagctggagaggatcaatgtctactacaatgaggccacaggtaggacagccagt
gggggtggaaactatgttcccagagccgtgctggttgacctggaacccggaaccatggac
tctgtccgctccggcccttttggccagatctttcggccagacaactttgtatttggtcaa
tccggagcaggcaacaactgggccaagggtcactacaccgagggcgcagagttagtggat
gcagtcctggacgtggtgcgcaaagaggcggaaagctgcgactgtctgcagggcttccag
ctcacccactcgctcggaggtggcaccggctcaggcatggggaccttgctcatcagcaag
atccgagaggagtttccagacaggatcatgaatacgttcagcgtggtgccatcacccaag
gtgtctgacacggtggtggagccctacaatgccacgttgtctgtgcatcagctggtggag
aacactgatgagacctactgcatcgacaacgaggccttgtacgacatctgcttccgcacg
ctcaagctgaccacgcccacctacggggacctcaaccacctggtatcagccaccatgagt
ggagtgaccacctgcctacgcttcccgggccagctcaatgcagatctacgcaagctggct
gtgaacatggtaccgttcccccgtctccacttcttcatgccaggattcgcacccttgacc
agcaggggcagccagcagtaccgggccctcaccgtacctgagctgacccaacagatgttc
gatgctaagaacatgatggctgcgtgtgacccgagacacggtcgctacctgaccgtggct
gctgtcttccggggacggatgtccatgaaagaggtggacgagcagatgttaagtgtgcag
agcaagaacagcagctacttcgttgagtggatccccaacaatgtcaagacagccgtatgt
gacatcccaccccggggcctgaagatggcagccaccttcatcggcaacagcaccgccatc
caggagctgttcaagcgcatctccgagcagttcaccgccatgttcaggcgcaaggccttc
ctgcactggtacaccggggaaggcatggacgagatggagtttacggaagcagagagcaat
atgaacgacctggtgtccgagtaccagcagtaccaggatgccacggctgaagagggcgag
ttcgaagaggaggccgaagaggaggtggcttaa

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