Mus pahari (shrew mouse): 110335385
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Entry
110335385 CDS
T05929
Symbol
Tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110335385 (Tdrd12)
Enzymes [BR:
mpah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
110335385 (Tdrd12)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110335385 (Tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
CCDC32
Gal-bind_lectin
Motif
Other DBs
NCBI-GeneID:
110335385
NCBI-ProteinID:
XP_021073173
Ensembl:
MGP_PahariEiJ_G0012821
LinkDB
All DBs
Position
1:complement(8433842..8502655)
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AA seq
1216 aa
AA seq
DB search
MLEVLVLKIEDPGCFWVIIKGCSHFLEQEVDYQKLNSAMNDFYNNMCQDIEIKPLMLEEG
QVCVVYCQELKCWCRAVIKSIISSADHYLAECFLVDFAKYIPVKSKNIRVAVESFMQLPY
RAKKFRLYGTKPVTLHIDFCEDNAEIVPATKWDSAAIQYFQSILRAATQVEAKLCAVEGD
AFEVYLYATIKNEKVCVNDDLVAKNFAYYVSPMGNKNLNTLEKSRQSLNSVSCSSKLSPS
LTLWPMLLQGKDYHRMENKAVNYKDSLTDSPKVMFEKKQQSFPLKHMDKSIESSVYWPTK
RGITIYADPDVPSASGFSQKPYEKPLRLTEKKDCDEKNGCVKLLQFLNPDPLRADEISDL
HQLQKVKLGTLQPGVVLRNRIEPCLTLDKSPLSADLKKHMALTCLNSDTEFMKVTVEEVI
PPEALQKNKFLGPSHTASYSWPPIARGCDVVVISHCGNDPLLYLPPLLTILQMGGCYKSL
PSRNGPLAVIVCPGWKKAQFIFELLGDYSISSRPLHPVLLTIGLYKDEAKNMKLPRGCDV
IVTTPHSLLRLLTYQSLLFLRLCHLVLDEVHVLFFEANEQMFAILDNFKKNVEVEERESA
PHQIVAVGVHWNRHIDHLVREVMKDPYVVITALEEAALYGNVQQVVHLCLECEKTSTLLH
VLDFVPSQAQKTLIFTCSVAETEVVCKGSPAEQGDKKTKSVLLLTERSAGHAVGVLRYLE
RADAKIPSELYEFTAGVLEAKEDKKARRPLCPYLKAFGFCKDKRICPDRHHINPEMDIPR
KLSSETLPVFGHIRVIPFYISNATNYFGRIIDKHVDLYETLNAEMNEYFKESSNKKAAEK
VENLGLYGLEEKTLFQRVQVLEVSQKEDTWGLGSVLVKFIDEGRTKLITRDQLLLLPEKF
HTLPPQAVEFIVCRVKPADSEIEWNPKVTRYIHHKIVGKMHDAKVVLALGNTLWIDPMVH
VTKLSNLKTSIIDYNVRAEILSMGMGIDNSEHLEQLKKLYKGAKLPAFEDLSGQTTVPTT
VEDTGCLQDTQQGDRGTERGAGSQVDSDKQKPGVLSEDLGSESTSKASEPHVRSFHPQIK
WFQKDDVVILKIKIRNVKDYKCKFFTDRVIFSAWVGDKFYLADLELQGDIRKDDCKCIIK
DDEPLITLAKEKQECWRGLLKQRNPNVAFDFDHWEECEEDSPFSKVVNSKNLSCKVAALA
ESSGSSSDTTDGSESE
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggtcctggtgctgaagattgaagatccaggttgcttctgggtaattataaaa
ggatgtagtcattttttagaacaagaagttgactaccaaaaactaaacagtgccatgaat
gacttctataacaacatgtgtcaagacatagaaataaaaccattaatgctggaagaaggg
caggtgtgtgtggtgtactgtcaggagctgaagtgctggtgcagggctgtgattaagtcc
atcatctcttctgcagaccattacctggcagagtgtttcctggtggattttgccaagtat
attccagtaaaatctaaaaacatccgagttgcagtagagtcttttatgcagcttccttac
agagcaaaaaaattcagactttacggtacaaaacctgtgacattgcacattgacttctgt
gaagacaatgctgagattgtacctgccacaaaatgggacagtgcagccatccagtacttt
cagagcattctaagagcagctacccaagtggaagccaaactgtgtgctgtagaaggggat
gcttttgaggtttacctttatgcaacaataaaaaatgaaaaagtttgtgttaatgatgac
ctagttgcaaagaattttgcgtattatgtgtcaccaatggggaataaaaacctcaatact
ttggagaaatccaggcagagtctcaattcggtgtcctgctccagtaagctcagcccatca
cttactctgtggccaatgcttctacaaggaaaagactatcacagaatggaaaataaagct
gtaaactataaggattccttgacagactcgcctaaagtgatgtttgagaagaagcagcag
agcttccctttaaaacacatggataagagtattgaatcttctgtgtactggccaacaaaa
agaggcataaccatatatgctgatccagatgttccatcagcaagtgggtttagccagaag
ccatatgagaagccactacgtttgactgaaaagaaagactgtgacgagaagaacggttgt
gtaaaattactgcaatttctaaatcctgatcctttgagagctgatgagatctctgacctg
caccagttgcagaaggtgaagctgggcacactgcagcctggtgtggtgctccggaacagg
attgagccctgcctaaccctggacaaatctcctctgtcggcagacctgaagaagcacatg
gctttgacctgtctgaactcagatacagagttcatgaaagttactgtggaagaagtgatc
ccaccagaggctcttcagaaaaacaagttcctgggacccagccacactgcatcttactcc
tggcctcctattgcacgtggctgtgatgtggttgtcatttctcactgtgggaatgaccca
ttgttgtacctgccaccactgcttacgattttgcagatggggggctgctacaagtcatta
ccaagtagaaatggacctcttgcagtcatcgtgtgtcctgggtggaaaaaggctcagttt
atttttgagttattgggagactatagcatatcctccaggcctcttcatcctgtgttatta
acaattggactttacaaagatgaagccaaaaatatgaagcttccaagggggtgtgatgtg
attgtcacaacgccacacagccttctgagacttcttacataccaaagcttgttatttctt
agactctgccacctggttctggatgaagtgcatgtactgttctttgaagctaatgagcaa
atgtttgccatattagataactttaaaaaaaatgttgaagtggaggagcgggagtctgca
ccacaccagattgtagccgtgggtgttcactggaacagacacatagaccacctagtcaga
gaggtcatgaaggacccctacgtcgtgatcaccgcccttgaggaggctgccctctatggc
aatgttcagcaggtagtgcatctgtgcctggagtgcgagaaaacctctactttactccac
gttcttgactttgttccaagtcaggcccaaaagaccttgatctttacctgttctgtcgca
gagacagaggttgtatgtaagggctcacctgcagagcagggagataagaaaactaaatct
gtcctgctgctgacggagaggagtgcaggccatgctgttggtgtcctgcgatacttggag
cgagcagatgccaagattccatcagagctgtatgagtttacagcaggggtcctggaagcc
aaagaagataagaaggccagaagacctctttgtccgtatcttaaagcttttggcttttgc
aaagacaaaaggatctgtcctgaccggcaccacattaatccagaaatggacatcccaagg
aaattatccagtgaaacactaccagtgtttggacatattagggtaatacctttttacatt
tcaaatgcaaccaattactttggtcgtataattgataaacatgtggatctttatgaaact
cttaatgcagaaatgaatgaatattttaaggagtccagtaataaaaaggctgctgaaaag
gtggagaatttggggttgtatggattagaagaaaaaacacttttccagagggttcaggtg
ttggaggtgagccagaaggaagacacctggggtttggggagtgtcctggtgaaattcata
gatgaaggcaggaccaagctcatcacaagagaccagctgctgctgctcccagagaagttc
cacactctgccccctcaggctgtggagttcattgtttgtagggttaaaccagctgacagt
gaaattgaatggaacccaaaggttactagatacattcatcataaaattgttgggaaaatg
catgatgctaaagtagtactggctttgggaaataccctttggattgatccaatggtgcat
gttacaaaactttcaaatctaaaaacttctatcattgattataatgttcgagctgaaatt
ttatccatgggaatgggtattgataattcagaacacctagaacaactgaaaaaactatac
aaaggagctaaactgccagcctttgaggacctttcaggccagaccacagtacctacaaca
gtagaagacaccgggtgtttgcaggacactcagcaaggagacagaggtacagagcgagga
gctggttcccaggtggactcggataagcagaagcctggagttttatctgaagaccttggc
agcgagagcactagcaaagcttcagagccacatgtgaggagctttcacccacaaataaag
tggttccaaaaagatgatgtggtcatcttaaagataaaaataaggaatgtcaaagattat
aagtgtaaattctttacagatagagtcattttcagtgcctgggtaggagacaagttttac
ttggctgatctggaactgcaaggtgacataaggaaagatgactgcaaatgcataattaag
gatgatgaacctctaatcacacttgcaaaagagaaacaggagtgctggcgtggcctcctc
aagcagcggaatcctaatgtggcttttgactttgaccactgggaggagtgtgaggaggac
agccctttctccaaggttgtaaattctaaaaacctgtcctgcaaagtggcagcgttggct
gagagcagcggttcctcttcagacactactgatgggagtgagagcgaatga
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integrated database retrieval system
