Mus pahari (shrew mouse): 110335417
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Entry
110335417 CDS
T05929
Symbol
Hdgfl2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2 isoform X1
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpah03400
]
110335417 (Hdgfl2)
DNA repair and recombination proteins [BR:
mpah03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110335417 (Hdgfl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
110335417
NCBI-ProteinID:
XP_021073209
Ensembl:
MGP_PahariEiJ_G0020752
LinkDB
All DBs
Position
18:23180822..23201779
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AA seq
678 aa
AA seq
DB search
MPHAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP
YDKCKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPPPVSSSDSEAPEADLGCGSDADKDK
EARRVMTVTAVTTTATSDRMESDSDSDKSSDHSGLKRKTPVLKVSVSKRARRASSDLDQA
SVSPSEEDSESPSESEKTSDQDFTPEKKTAARPPRRGPLGGRKKKHPTGYACPQKVPSAS
DSDSKADSDGAKEEPVVAAQPSPSSSSSSSSSSSSDSDVSVKKLPRGRKPAEKPPPKPRG
RRPKPERPPSTSSSDSDSDSGEVDRISEWKRRDEERRRELEARRRREQEEELRRLREQER
EEKERRKERAERGASSGDELEDEEPVKKRSRKARGRGTPSSSDSEPEGELGKEGKKLAKK
SQLPGSESTRKSGQKEKRGRPDEKPRARPVKVERTRKRSEGLSLERKGEKKKEPSVEERL
QKLHSEIKFALKVDNPDVRKCLSALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDV
MAKAAEVYTRLKSRVLGPKVEALQKVNKAGAEKERADNEKIEEQPGEQAPRELAEDEPST
DRSAPVNGEATSQKGENMEDRAQEDGQDSEDGPRGGSSEELHDRPQDSLDPARPGNERQD
HERTRLASESANDDNEDS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacgccttcaagcccggggacttggtgtttgccaagatgaagggctacccgcac
tggccggcccggattgatgacattgctgatggtgccgtgaagcccccacccaacaaatac
cccatcttcttttttggaacgcatgaaacggccttcctgggacccaaggacctgttcccc
tatgataagtgcaaggacaagtacggaaagcccaacaagaggaaaggcttcaatgagggg
ctctgggagatacagaacaacccccatgccagctacagtgcacctccgccggtgagctcc
tctgacagtgaggcccctgaagctgacctgggttgtggcagcgacgcggacaaggacaaa
gaagcccggagggtcatgactgtgacagctgtgaccaccacggccaccagtgacaggatg
gagagcgattctgactctgacaagagcagtgatcacagtggcctgaagcggaagacacca
gtcttgaaggtgtcagtctctaaacgagctagaagagcctccagtgacctggatcaggcc
agtgtgtccccatcagaagaggattccgagagtccatctgagtcggagaagaccagtgac
caggattttaccccagagaagaagacagcggcccggccaccacggcgaggtcctctggga
ggacgcaagaagaagcaccctactggctatgcctgtccccagaaggtgccatcagcctcg
gattcagactccaaagccgactcagatggggccaaggaggagcctgtggttgcagcacag
ccgtctccatcctcctcgtcctcgtcctcatcctcatcttcctcagactcagatgtgtct
gtcaagaaactccctcgaggcagaaagccagctgagaagccacccccaaaaccccgaggg
cggagaccaaagccagaacgaccaccttccacctccagcagtgacagtgacagtgacagt
ggtgaagtggaccgcatcagtgaatggaagagacgcgatgaagagcgaaggcgtgagctg
gaggctcggaggcgacgcgagcaggaggaagagctccggagacttcgagaacaggaaagg
gaggagaaggagcggcgcaaggagcgggcagagcgtggggccagcagtggggatgagctg
gaggacgaggagcctgtgaagaagcgtagccgaaaggctcgaggccgaggcacaccatcc
tcctctgactcagaacctgagggggagcttgggaaagaggggaagaaattggccaagaag
tcccaactgccaggctcagagtctacaaggaagtctgggcagaaggagaagagagggcgg
ccagatgagaagccacgagccaggcctgtgaaggtagagcggacgcggaagcggtcagag
ggtctctcactggaaaggaaaggggagaagaagaaagaaccctctgtagaggagagactg
caaaagctgcacagcgagatcaaatttgcactgaaggttgacaacccagatgtgaggaag
tgtctgagtgcactagaagaactggggaccctgcaggtaacctctcagatccttcagaag
aacacagatgtggtagcaacgctgaagaagattcgccggtacaaggccaacaaagatgtg
atggcgaaggcagcagaggtctacacccggctcaagtcacgggtcctggggccgaaagtt
gaggctctccagaaggtgaacaaggctggagctgagaaggaacgggccgataacgagaag
atagaggagcagccgggggagcaggctcccagagagctggcagaggatgagcccagcacc
gatcggtcagcacctgtgaacggtgaggccacatcccagaagggggaaaacatggaagac
agagcacaggaagacgggcaggactcggaggatggccccaggggtggctcctcagaagag
ctgcatgacagaccacaggacagcttggacccagccaggcctggaaatgagcgtcaggac
catgagaggacaaggctggcctctgagtctgccaatgatgacaatgaggacagctga
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