Mus pahari (shrew mouse): 110335582
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Entry
110335582 CDS
T05929
Symbol
Tapbp
Name
(RefSeq) tapasin isoform X1
KO
K08058
TAP binding protein (tapasin)
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04612
Antigen processing and presentation
mpah05163
Human cytomegalovirus infection
mpah05168
Herpes simplex virus 1 infection
mpah05169
Epstein-Barr virus infection
mpah05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
110335582 (Tapbp)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
110335582 (Tapbp)
05168 Herpes simplex virus 1 infection
110335582 (Tapbp)
05163 Human cytomegalovirus infection
110335582 (Tapbp)
05169 Epstein-Barr virus infection
110335582 (Tapbp)
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Gene cluster
GFIT
Motif
Pfam:
C1-set
ig
Ig_3
Motif
Other DBs
NCBI-GeneID:
110335582
NCBI-ProteinID:
XP_021073460
Ensembl:
MGP_PahariEiJ_G0020427
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All DBs
Position
18:1821692..1830990
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AA seq
463 aa
AA seq
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MKPLLLLVAVALGLATVVSAGPETIECWFVEDAGGGGLSKKPATLLLRHGPRGPPPRPDL
DPKLYFKVDDPAGMLLAAFRRYPAGASAPHCEMSRFIPFPASAKWARSLSPQQNCPRALD
GDWLLVSVSSKVFSLSSLLRLQPEPQREPVFITMATVVLTVLTHNPAPRIPLGKDAVLDL
RFAYAPSTLEGSSSLDAGPPPFGLEWRRQHRGKGHLLLAATPGLAERMPPAQEKATAFVA
WDDDEPWGPWTGNGTFWLPAVKPSQEGVYLATVHLPYLQGQVSLELTVHKPPRVSLTPAP
VVWAAPGEAPPELLCLASHFFPAEGLEVKWELRGGPGGSSRKAEGKTWLSTVRHHSDGSV
SQSGHLQLPPVTAKQHGVRYVCRVHHSSLPASGRSADVTLEVAGFSGPSIEDSIGLFLSA
FLLLGLLKALGWLVAAYRTIPEVSKEKATAASLTIARNSKKSQ
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctctgctcctgctcgtcgctgtggcactgggcctggcgaccgtcgtctcggct
ggaccagagacgatcgagtgctggttcgtggaggatgcaggtggaggtggcctgtctaag
aaacctgccacattgctactgcgccatggacccagaggaccgccgccccggccagatctt
gacccgaagctgtatttcaaggtggatgacccggcgggaatgctcctggctgccttcagg
cggtaccccgcaggcgcctccgccccacactgcgagatgagccgcttcatcccgttcccc
gcctcggcgaagtgggctagaagtctgagtccgcagcagaactgcccgcgggccctggac
ggggattggctgctggtcagtgtatccagcaaagtcttcagcctctccagcctgctgcga
ctgcagccggagcctcagcgggagcctgtcttcatcaccatggcaacagtggtgctgacc
gtcctcacccataaccccgcccctcgcatccctctgggaaaggatgcagtgctggatctg
cgcttcgcctacgcaccctccaccctggaaggttcttcctctctggacgcaggccctcct
ccctttgggctggagtggcgacgccagcacaggggaaagggtcacctgctgctggctgcc
acccctgggctcgccgagagaatgccaccagcccaggaaaaggctacggcatttgtagct
tgggatgatgatgagccctggggcccgtggactggcaacgggaccttctggcttccagct
gtgaagccttctcaggagggcgtctacctggctactgtacacctgccctacctgcaagga
caggtctccctggagctgacagtgcacaagccccccagagtgtctctaacaccagcaccc
gttgtgtgggctgccccaggagaggcacccccagaactgctctgtcttgcatcccacttc
ttccctgcggagggtctggaggtcaagtgggagctcagaggtggcccaggaggaagttct
agaaaggctgaggggaagacgtggctctccactgtccgccaccattctgatggctctgtc
agccagtctgggcacctgcagctcccgccagtcactgccaagcaacatggagttcgttat
gtctgtcgggtgcaccactctagcctgccagcatcgggtcgcagtgctgacgtcaccctg
gaggtggcaggcttctcggggccctccatcgaggacagcatcggcctgttcctgtctgct
tttctccttctgggactcctcaaggcgctaggctggctggtagctgcctaccggaccatt
cctgaagtctcaaaggagaaggccacagctgccagcctgaccattgccaggaactcaaag
aagtcacagtaa
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