KEGG   Mus pahari (shrew mouse): 110335582
Entry
110335582         CDS       T05929                                 
Symbol
Tapbp
Name
(RefSeq) tapasin isoform X1
  KO
K08058  TAP binding protein (tapasin)
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04612  Antigen processing and presentation
mpah05163  Human cytomegalovirus infection
mpah05168  Herpes simplex virus 1 infection
mpah05169  Epstein-Barr virus infection
mpah05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09150 Organismal Systems
  09151 Immune system
   04612 Antigen processing and presentation
    110335582 (Tapbp)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    110335582 (Tapbp)
   05168 Herpes simplex virus 1 infection
    110335582 (Tapbp)
   05163 Human cytomegalovirus infection
    110335582 (Tapbp)
   05169 Epstein-Barr virus infection
    110335582 (Tapbp)
SSDB
Motif
Pfam: C1-set ig Ig_3
Other DBs
NCBI-GeneID: 110335582
NCBI-ProteinID: XP_021073460
Ensembl: MGP_PahariEiJ_G0020427
LinkDB
Position
18:1821692..1830990
AA seq 463 aa
MKPLLLLVAVALGLATVVSAGPETIECWFVEDAGGGGLSKKPATLLLRHGPRGPPPRPDL
DPKLYFKVDDPAGMLLAAFRRYPAGASAPHCEMSRFIPFPASAKWARSLSPQQNCPRALD
GDWLLVSVSSKVFSLSSLLRLQPEPQREPVFITMATVVLTVLTHNPAPRIPLGKDAVLDL
RFAYAPSTLEGSSSLDAGPPPFGLEWRRQHRGKGHLLLAATPGLAERMPPAQEKATAFVA
WDDDEPWGPWTGNGTFWLPAVKPSQEGVYLATVHLPYLQGQVSLELTVHKPPRVSLTPAP
VVWAAPGEAPPELLCLASHFFPAEGLEVKWELRGGPGGSSRKAEGKTWLSTVRHHSDGSV
SQSGHLQLPPVTAKQHGVRYVCRVHHSSLPASGRSADVTLEVAGFSGPSIEDSIGLFLSA
FLLLGLLKALGWLVAAYRTIPEVSKEKATAASLTIARNSKKSQ
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgaagcctctgctcctgctcgtcgctgtggcactgggcctggcgaccgtcgtctcggct
ggaccagagacgatcgagtgctggttcgtggaggatgcaggtggaggtggcctgtctaag
aaacctgccacattgctactgcgccatggacccagaggaccgccgccccggccagatctt
gacccgaagctgtatttcaaggtggatgacccggcgggaatgctcctggctgccttcagg
cggtaccccgcaggcgcctccgccccacactgcgagatgagccgcttcatcccgttcccc
gcctcggcgaagtgggctagaagtctgagtccgcagcagaactgcccgcgggccctggac
ggggattggctgctggtcagtgtatccagcaaagtcttcagcctctccagcctgctgcga
ctgcagccggagcctcagcgggagcctgtcttcatcaccatggcaacagtggtgctgacc
gtcctcacccataaccccgcccctcgcatccctctgggaaaggatgcagtgctggatctg
cgcttcgcctacgcaccctccaccctggaaggttcttcctctctggacgcaggccctcct
ccctttgggctggagtggcgacgccagcacaggggaaagggtcacctgctgctggctgcc
acccctgggctcgccgagagaatgccaccagcccaggaaaaggctacggcatttgtagct
tgggatgatgatgagccctggggcccgtggactggcaacgggaccttctggcttccagct
gtgaagccttctcaggagggcgtctacctggctactgtacacctgccctacctgcaagga
caggtctccctggagctgacagtgcacaagccccccagagtgtctctaacaccagcaccc
gttgtgtgggctgccccaggagaggcacccccagaactgctctgtcttgcatcccacttc
ttccctgcggagggtctggaggtcaagtgggagctcagaggtggcccaggaggaagttct
agaaaggctgaggggaagacgtggctctccactgtccgccaccattctgatggctctgtc
agccagtctgggcacctgcagctcccgccagtcactgccaagcaacatggagttcgttat
gtctgtcgggtgcaccactctagcctgccagcatcgggtcgcagtgctgacgtcaccctg
gaggtggcaggcttctcggggccctccatcgaggacagcatcggcctgttcctgtctgct
tttctccttctgggactcctcaaggcgctaggctggctggtagctgcctaccggaccatt
cctgaagtctcaaaggagaaggccacagctgccagcctgaccattgccaggaactcaaag
aagtcacagtaa

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