Mus pahari (shrew mouse): 110335586
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Entry
110335586 CDS
T05929
Symbol
Tap2
Name
(RefSeq) antigen peptide transporter 2
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah02010
ABC transporters
mpah04145
Phagosome
mpah04612
Antigen processing and presentation
mpah05163
Human cytomegalovirus infection
mpah05168
Herpes simplex virus 1 infection
mpah05169
Epstein-Barr virus infection
mpah05170
Human immunodeficiency virus 1 infection
mpah05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110335586 (Tap2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110335586 (Tap2)
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
110335586 (Tap2)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
110335586 (Tap2)
05168 Herpes simplex virus 1 infection
110335586 (Tap2)
05163 Human cytomegalovirus infection
110335586 (Tap2)
05169 Epstein-Barr virus infection
110335586 (Tap2)
09163 Immune disease
05340 Primary immunodeficiency
110335586 (Tap2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpah02000
]
110335586 (Tap2)
Enzymes [BR:
mpah01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
110335586 (Tap2)
Transporters [BR:
mpah02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
110335586 (Tap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_30
AAA_21
AAA_29
AAA_25
AAA_23
AAA_15
AAA_16
Zeta_toxin
AAA_33
AAA_18
SRP54
Motif
Other DBs
NCBI-GeneID:
110335586
NCBI-ProteinID:
XP_021073464
Ensembl:
MGP_PahariEiJ_G0020445
LinkDB
All DBs
Position
18:2110054..2121573
Genome browser
AA seq
708 aa
AA seq
DB search
MALPYLRPWVSLLLLDMALLGLLQGSLGNLLPRGLPGLWLEGTLRLGVLWGLLKVGGLLG
LVGTLLPLLCLATPLFFSLKALVGGTVSTSVVRVASASWGWLLAGYGAAALSWAVWAVLS
PAGVQEKEPGQENNRTLMKRLLKLSRPDLPFLIAAFFFLVLAVWGETLIPRYSGRVIDIL
GGDFDPDAFASAIFLMCLYSVGSSLSAGCRGGSFLFTMSRINLRIREQLFSSLLRQDLGF
FQETKTGELNSRLSSDTSLMSRWLPFNANILLRSLVKVVGLYFFMLQVSPRLTFLSLLDL
PLTIAAEKVYNPRHQAVLKEIQDAVAKAGQVVREAIGGLQTVRSFGAEEQEVSRYKEALE
RCRQLWWRRDLEKDVYLVIRRVMALGMQVLILNCGVQQILAGEVTRGGLLSFLLYQEEVG
HYVRNLVYMYGDMLSNVGAAEKVFSYLDRRPNLPQPGILAPPWLEGRVEFQDVSFSYPSR
PEKPVLQGLTFTLHPGTVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGEPLTEYDHH
YLHRQVVLVGQEPVLFSGSVKDNIVYGLRDCEDAQVMAAAQAACADDFIGEMTNGINTEI
GEKGGQLAVGQKQRLAIARALVRNPRVLILDEATSALDAQCEQALQAWRSQGDRTMLVIA
HRLHTVQNADQVLVLKQGRLVEHDQLRDDQDVYAHLVQQRLEAEASRP
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgccctatctgaggccctgggtctctctgctgctgttggacatggctttactt
gggttgctacaaggatctctgggaaatctgcttccccgggggctgccaggactctggctg
gagggcaccctgcgacttggagtgctgtggggactgctaaaagtgggagggctgctggga
cttgtggggacccttctgcccttgctctgcctggccactcccctatttttctcgctgaaa
gccctggtgggaggcaccgtgagcacctcagtcgtccgagtggcttctgcctcttggggc
tggctgctggctggctatggggctgccgcgctgagctgggccgtgtgggctgtgctgagc
ccggctggtgtccaggagaaggaaccgggtcaggagaacaacagaacactgatgaagcgg
ttgctgaagctgtccaggccggacctgcctttcctcatagctgccttcttcttcctcgtg
ctggctgtgtggggggagacgttaatccctcgctattccggtcgtgtgattgacatcctg
ggaggtgatttcgaccccgacgcctttgcaagcgccatctttctcatgtgcctctactct
gttgggagctccctctctgcaggctgtagaggaggctccttcctcttcaccatgtccagg
atcaacctgcggatacgagagcagcttttctcatcgttgttgcgccaagaccttggattc
ttccaggagaccaagacaggggagctgaactcgcggctgagctctgacacctctctgatg
agccgctggctccctttcaatgccaatatcctgttgcggagcctggtgaaggtggtgggg
ctctacttcttcatgctccaggtgtcgcccagactcaccttcctctccctgctggacctg
cccctcacaatagcagccgagaaggtgtacaacccccgccatcaggcggtgctaaaggag
atccaggatgcagtggccaaagcagggcaggtggtgcgcgaggccataggagggctgcag
actgtgagaagctttggggcggaggagcaggaagtcagtcgctacaaggaagccctggag
cgatgtagacagctgtggtggcgccgagacctggaaaaagacgtgtatctagtcatccgg
agggtgatggccttgggcatgcaggtgctgattctgaactgcggtgtgcagcagatcctg
gctggggaggtcacccggggcggcctgctctccttcctgctgtatcaggaggaagtgggg
cactatgtccggaacctggtttacatgtatggggatatgctgagcaacgtgggtgctgct
gaaaaggttttttcctacctggaccgaagaccgaatctgccccagcctgggatcctggcc
cctccctggctggaggggcgcgtggaattccaagacgtctccttttcttatcccagtcgc
cccgagaagcctgtgctccagggtctgacgttcaccctgcatcctggaacggtaacagcg
ttggtgggacccaatgggtcagggaagagcaccgtggctgccctgctgcagaacctgtac
cagcccaccgggggccagctgctgctggatggcgagcccctgaccgagtatgatcaccac
tacctgcaccgccaggtggttctggtgggacaggagccggtgctgttttcgggttctgtc
aaggacaatattgtctatggcctgagggactgtgaggacgctcaggtgatggcagctgcc
caggcggcctgtgcagatgacttcataggggaaatgactaatggaataaacacagaaatc
ggggagaaagggggccagttagctgtgggacagaagcaacgtctggccattgcccgggcc
cttgtacggaacccacgggtcctcatcctggatgaggctaccagcgccctggatgcccag
tgtgagcaggccctacaggcctggagatcgcagggggacaggacgatgctggtgattgcc
cacaggctgcacacggttcagaatgctgaccaagttctggtgctcaagcaggggcgtctg
gtggagcatgaccagctcagggacgaccaggatgtctacgcccacctggtacagcagcgg
ctggaggctgaggcctccagaccctga
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