Mus pahari (shrew mouse): 110335619
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Entry
110335619 CDS
T05929
Symbol
Nrxn1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110335619 (Nrxn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110335619 (Nrxn1)
Membrane trafficking [BR:
mpah04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
110335619 (Nrxn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
110335619
NCBI-ProteinID:
XP_021073518
Ensembl:
MGP_PahariEiJ_G0020949
LinkDB
All DBs
Position
18:complement(55428958..56498990)
Genome browser
AA seq
1546 aa
AA seq
DB search
MGTALVQRGGCCLLCLSLLLLGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFQLKT
RSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGAWHSVRIR
RQFRNTTLYIDRAEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVREREPF
KGWIRDVRVNSSQALPVDGGEVKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQ
AVCDCSRTGFRGKDCSQGKACPTPLIYYDSDQGKYTCMTTGKPLNRKWVNDNNAEGLAHL
MMGDQGKSKGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSA
DYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVN
KLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEV
VYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLPKWNAKKT
GSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTI
KIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELYLGGLPEN
KAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPSCSKETAKPCL
SNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVMHTEAED
VSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETLFAG
YNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETGIITERRYLSSV
PSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKSSYVALATL
QAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNK
PLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNLDLKSDLYIGGVAKETYKSLPK
LVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQ
WDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWPPNDRPSTRADRLAIGFSTVQK
EAVLVRVDSSSGLGDYLELHIHQGKVGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSG
GNATLQVDSWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQAT
IIIGGKEQGQPFQGQLSGLYYNGLKVLNMAAENDANIAIVGNVRLVGEVPSSMTTESTAT
AMQSEMSTSIMETTTTLATSTARRGKPPTKEPISQTTDDILVASAECPSDDEDIDPCEPS
SGGLANPTRVGGREPYPGSAEVIRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEG
SYHVDESRNYISNSAQSNGAVVKEKQPSSAKSANKNKKNKDKEYYV
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atggggacggcgttggtccagcgcgggggctgctgtctcctctgcctgtcgctgctgctg
ctgggttgctgggcagagctgggcagcgggctggagttcccgggcgccgagggccagtgg
acgcgcttccccaagtggaacgcttgctgcgagagtgagatgagcttccagctgaagacg
cgcagtgcccgcggcctcgtgctctacttcgacgacgagggcttctgcgacttcctcgag
ctcatcctaacacgcggcggccgcctgcagctcagcttctccatcttctgcgccgagccc
gccacgctattggctgacacgccggtcaacgacggcgcctggcacagcgtgcgcatccgc
cgccagttccgcaacaccacgctctacatcgaccgtgccgaggccaagtgggtggaggtc
aagtccaagcgcagggacatgacggtgttcagcgggctcttcgtgggcggcctgccgcct
gaactgcgcgccgcggccctcaagctcacgctggcctcggtgcgcgagcgcgagcccttc
aagggctggatccgtgacgtcagggtcaactcgtcgcaggcgctgcccgtggacggcggc
gaggtcaagctggacgacgagcctcccaacagcggtggcgggagcccatgcgaggcgggc
gaagaaggcgagggcggcgtgtgcctcaacgggggcgtgtgctccgtggtcgacgaccag
gccgtgtgcgactgctcgaggaccggcttccgtggcaaggactgcagccaaggtaaggcc
tgcccgaccccgcttatttattatgacagtgaccaaggaaaatatacttgtatgactaca
ggaaaacctctaaacagaaagtgggtgaatgacaacaatgcggaaggtctggcgcacctg
atgatgggcgaccaaggtaaaagtaaaggaaaagaagagtatattgccacattcaaggga
tctgaatacttctgctacgacttatctcaaaaccccattcaaagcagcagcgatgaaata
actctgtcctttaaaactcttcagaggaatggactgatgcttcacacagggaaatcagct
gattatgtcaatcttgcattgaaaaatggagctgtctctctggtcattaatttgggatca
ggggcctttgaagcactagtggagcctgtgaatggaaagtttaatgataatgcctggcat
gatgtgaaagtcaccaggaatctgcgtcagcactcaggcattggacacgctatggtaaac
aaactacattgttcggtgacaatatcagtggatgggattcttaccacaacgggctacacg
caagaagattacaccatgctggggtctgatgactttttctatgttggaggcagccccagc
acagccgaccttccagggtcaccagtcagtaacaactttatgggctgtctcaaagaggtt
gtatataaaaataatgatgtaaggctggagttatcacgacttgccaagcaaggagatcct
aagatgaagattcacggtgtggtggcttttaagtgtgaaaatgtggcgaccttagaccca
ataacttttgagaccccggaatctttcatttctttgcctaagtggaatgcaaagaaaaca
ggctcaatatcatttgatttccgtacaacggagccaaatggcctcatcctgtttagccat
ggcaagccaagacatcagaaggatgccaagcacccacagatgattaaggttgactttttt
gctatcgagatgctggacggccacttgtacctcctcttagacatgggatcaggtactata
aaaatcaaagccctgcagaagaaagtaaatgatggagaatggtatcacgtggatttccag
cgggacggacggtcaggtaccatttctgtcaacacactacgcactccctacacagctccc
ggtgagagtgagatcctggacctagatgatgagttgtacctaggtggcttgccagaaaat
aaggctggcctggtctttcctaccgaggtgtggactgctctgctcaactatggctatgtg
ggctgcatccgggatctattcattgatggccagagcaaagacatccggcagatggcggaa
attcagagtactgctggagtaaagccatcctgctcaaaagagacagcaaaaccgtgcctt
agcaatccttgcaaaaacaatggcatgtgcagagatggctggaacagatacgtctgtgat
tgctctggaacaggctatctcggcaggtcctgtgaaagagaggcaacggttttgagctat
gacgggagtatgttcatgaaaattcagctcccggtggtgatgcacactgaggctgaggac
gtgtccttacggttcagatcccagcgtgcatatggtattctgatggcgaccacttctaga
gactctgcagacacccttcgactggagctagatgcaggacgtgtgaaactcacggtcaat
ctagattgtatcaggattaactgtaattccagcaaaggtcctgagaccctttttgctggc
tataacctcaatgataatgaatggcacacagtgcgtgtggttcggcgaggaaaaagctta
aagctaactgtggatgatcaacaagccatgacaggccaaatggcaggtgatcatacaagg
ctggagtttcataacatcgagacaggcatcatcacagaacgacgttatctttcttctgtc
ccctccaatttcattgggcacctgcaaagcctgacatttaatggaatggcatacatagac
ttgtgcaaaaatggtgatatagattactgtgaactcaatgccaggtttggattcaggaac
atcatcgcagatcctgtcaccttcaagaccaaatcgagctatgttgccttagctacattg
caagcctacacttctatgcatctatttttccaattcaagacaacatctctagatggacta
attctgtataacagtggagatggaaatgactttattgtggttgaattagttaaagggtac
ttgcattatgtgtttgacttgggaaacggtgctaacctcatcaaagggagctcaaacaaa
ccactcaatgacaatcagtggcacaatgtgatgatttcacgggacaccagcaatctccac
acagtaaagatcgacacgaaaatcacaacacagatcactgcgggagctagaaatttagac
cttaagagtgacttgtatattggaggagtggctaaagaaacatataaatccttgccaaaa
ctggtccatgcgaaagaaggctttcaaggttgcctggcatctgtggacttgaatggcagg
cttccagatctcatctctgatgctctcttctgcaatgggcaaattgagagaggatgtgaa
gggcccagcacaacctgccaagaggactcatgttcaaatcaaggcgtttgcttgcagcaa
tgggacggcttcagctgtgactgtagcatgacttccttcagtggcccgctctgcaatgac
cctgggacaacatatatctttagcaaaggtggtggacagattacatataagtggcctccc
aatgaccgccctagtacacgagcagacaggctggccatcgggtttagcactgtccagaag
gaagcagtgttggtgcgtgtggacagttcctcaggcctgggtgactaccttgagctgcac
atacaccaaggaaaagttggagttaagtttaatgttgggacagatgacatcgccattgaa
gaatctaatgcaatcattaatgatgggaaataccatgtagtacgtttcacaaggagtggt
ggcaatgccacgttacaggtggacagctggccagttatcgagcgctaccctgcaggaaac
aatgataacgagcgcctggcgattgctagacagcgaattccatatcgacttggtcgagta
gttgatgaatggctactcgacaaagggcgtcagctcacaatcttcaatagccaagcaacc
ataataattggcgggaaagagcagggccagcccttccagggccagctctctgggctttac
tacaatggcttgaaagttctgaatatggcagcagagaacgatgccaacatcgccatagtg
gggaatgtgaggctggtcggtgaagtgccttcctctatgacaactgagtcgacagccact
gccatgcagtctgagatgtccacctcaatcatggagactaccacaaccctggctaccagc
acagctagaagaggaaagccccccacaaaggaacccatcagccagaccacagatgatatc
cttgtggcctccgcagagtgtcccagcgacgatgaggacattgacccctgtgagccgagc
tcaggtgggttagccaaccccaccagagtgggcggccgcgaaccatacccaggctccgca
gaggtgatacgggagtccagcagtaccactggcatggtggtggggattgttgcagcagct
gctctgtgcatcctcatcctcctatatgccatgtacaagtacagaaaccgggatgaaggg
tcataccacgtggatgagagtcgaaactacatcagtaactcagcacagtccaatggggct
gtggtcaaggagaagcagcccagcagtgctaaaagcgccaacaaaaacaagaaaaacaag
gataaggagtattatgtctga
DBGET
integrated database retrieval system
