Mus pahari (shrew mouse): 110335661
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Entry
110335661 CDS
T05929
Symbol
Gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110335661 (Gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpah03021
]
110335661 (Gtf2f1)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
110335661 (Gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
110335661
NCBI-ProteinID:
XP_021073607
Ensembl:
MGP_PahariEiJ_G0020788
LinkDB
All DBs
Position
18:complement(24122685..24131785)
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AA seq
516 aa
AA seq
DB search
MAALGSSSQNVTEYVVRVPKNTSKRYNIMAFNAADKVNFATWNQARLERDLSNKKIYQEE
EMPESGAGSEFNRKLREEARRKKYGIVLKEFRPEDQPWLLRVNGKSGRKFKGIKKGGVTE
NTAYYIFTQCADGAFEAFPVQNWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQR
RLKDQDQDEDEEEKEKRSRKKPSELRIHDLEDDLEMSSDASDASGEEGSRASKAKKKAPV
TKAGRKKKKKKGSDDEAFEDSDDGDFEGQEVDYMSDGSSSSPDETEGKPKVPQQEDGPKG
VDEQSESSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKDSSDDSDSSEESDIDSETSSA
LFMAKKKTPPKRERKPSGGSSKGTSRPGTPSAEAASTSSTLRAAASKLEQGKRTSETPAA
KRLRMDTGPQSLSGKSTPSSGIPPVPSHRDVQVTEDAVRRYLTRKPMTTKDLLKKFQTKK
TGLSSEQTVNVLAQILKRLNPERKMIGDKMHFSLKE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctaggctccagcagccagaatgtcaccgagtacgtcgtccgagtccccaag
aacacatccaaaagatacaacataatggcttttaatgcagccgataaagtcaactttgct
acctggaaccaggcgcggctggagcgggatctgagcaacaagaagatttaccaggaagag
gagatgccagagtctggtgcgggcagtgaattcaaccgcaagctcagggaggaggcacgc
cggaagaagtacggcatcgtcctaaaggagtttcggcctgaggaccagccttggctactc
cgtgtcaatggcaaatcaggacggaagttcaaaggcattaagaaaggtggggtaacagag
aacacagcctactacatcttcacacagtgtgctgatggtgccttcgaggccttccctgta
cagaactggtacaatttcacaccactggcccgacaccgcacactcactgctgaggaagcg
gaggaggaatgggagaggaggaacaaggtcctaaaccacttcagcatcatgcagcagcgg
cggctcaaggaccaggaccaggatgaagatgaggaggagaaggagaagcgcagtcgcaag
aagcctagtgagctgcgcattcatgacctggaggatgacctggaaatgtcctctgatgcc
agcgatgccagtggcgaagagggcagcagagcctccaaggctaagaaaaaggccccagtg
accaaggcaggcaggaagaagaaaaagaagaagggctcagatgatgaggcttttgaggac
agtgatgatggggacttcgagggccaggaggtagactacatgtccgacggctccagcagc
tctccagatgagacagaaggcaagcccaaagtgccccaacaggaggatggcccaaagggt
gtggatgagcagagcgagagcagtgaggagagtgaggaggagaagccccctgaggaggac
aaggaggaggaagaagagaagaaggcccctaccccacaagagaagaagcgcaggaaagac
agcagtgatgactcagacagctcagaagagagcgacatagacagtgagacctcctctgcg
ctcttcatggcgaagaagaagacacccccaaagagggagaggaagccatcagggggaagt
tcaaagggcaccagtcggccaggaactcccagtgcagaagcagcaagcacctcttctacc
ctgcgggccgcagccagcaagctggagcaggggaagcggacgagtgagactccagcagcc
aagcgtcttcggatggacacgggtccccagagcctgtctgggaagtccacacccagcagc
ggcatccctcccgtcccctcccacagggatgtccaggtgacagaggacgcagtgcgccgc
tacctgacccgcaagcccatgaccacaaaggacctgctgaagaagttccagaccaagaag
acggggctgagcagcgagcagacagtaaatgtgctggcgcagatcctcaagcgcctcaac
cctgagcgcaagatgattggtgataagatgcacttctccctcaaagagtga
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