KEGG   Mus pahari (shrew mouse): 110335873
Entry
110335873         CDS       T05929                                 
Symbol
Tubb
Name
(RefSeq) tubulin beta chain isoform X1
  KO
K07375  tubulin beta
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04145  Phagosome
mpah04540  Gap junction
mpah04814  Motor proteins
mpah05010  Alzheimer disease
mpah05012  Parkinson disease
mpah05014  Amyotrophic lateral sclerosis
mpah05016  Huntington disease
mpah05020  Prion disease
mpah05022  Pathways of neurodegeneration - multiple diseases
mpah05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110335873 (Tubb)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    110335873 (Tubb)
  09142 Cell motility
   04814 Motor proteins
    110335873 (Tubb)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110335873 (Tubb)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    110335873 (Tubb)
   05012 Parkinson disease
    110335873 (Tubb)
   05014 Amyotrophic lateral sclerosis
    110335873 (Tubb)
   05016 Huntington disease
    110335873 (Tubb)
   05020 Prion disease
    110335873 (Tubb)
   05022 Pathways of neurodegeneration - multiple diseases
    110335873 (Tubb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mpah03036]
    110335873 (Tubb)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mpah04812]
    110335873 (Tubb)
   04147 Exosome [BR:mpah04147]
    110335873 (Tubb)
Chromosome and associated proteins [BR:mpah03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     110335873 (Tubb)
Cytoskeleton proteins [BR:mpah04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    110335873 (Tubb)
Exosome [BR:mpah04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   110335873 (Tubb)
  Exosomal proteins of colorectal cancer cells
   110335873 (Tubb)
  Exosomal proteins of bladder cancer cells
   110335873 (Tubb)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 110335873
NCBI-ProteinID: XP_021073927
Ensembl: MGP_PahariEiJ_G0020528
LinkDB
Position
18:complement(3771502..3774984)
AA seq 444 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEEDFGEEAEEEA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgagggaaatcgtgcacatccaggccggacagtgtggcaaccagatcggtgctaagttc
tgggaggtgataagcgatgaacatggcatcgaccccaccggtacctaccacggagacagc
gacctgcagctggaccgaatctctgtgtactataatgaagccacaggtggcaagtacgtc
cctcgagctatcttggtggatctagaacctgggactatggactctgttcgctcaggtcct
tttggccagatcttcagaccagacaacttcgttttcggtcagtctggggcaggcaacaac
tgggctaagggccactacacagagggagctgagttggttgactctgtcttggatgtggtg
cggaaggaggcggagagctgtgactgcctgcaaggctttcagctgacccactcactgggt
ggaggcactggctctggcatgggcaccctgctcatcagcaagatccgagaagaatatcct
gaccgcatcatgaataccttcagcgtggtgccctcacccaaagtttctgataccgtggtc
gagccctacaatgccaccctgtctgtccatcagttggtggagaacacagatgagacctac
tgcattgacaacgaagccctctatgacatctgcttccgtaccctcaagctcaccacgcca
acctacggagacctgaaccatctcgtctcggccaccatgagcggtgtcaccacctgcctc
cgtttcccgggccagcttaacgctgaccttcgaaagctggctgtcaacatggtgccgttc
ccacgtctccacttcttcatgcctgggtttgcgcctctcaccagccgtggaagccagcag
taccgggccctcactgtgcctgaacttacccagcaggtcttcgacgccaagaacatgatg
gccgcctgcgacccgcgccatggccggtacctcacagttgctgctgtcttccgtggacgg
atgtccatgaaggaggttgatgagcagatgctcaacgtgcagaataagaatagcagctac
ttcgtggaatggatccccaacaacgtcaagacagctgtctgtgacatcccaccacgtggc
ctcaagatggcagtcaccttcattggaaatagcaccgccatccaggagctcttcaagcgc
atctctgagcagtttacggcgatgttccgccggaaggctttcctccactggtacacgggt
gagggcatggacgagatggagttcaccgaagccgagagcaacatgaacgacctcgtctcc
gagtaccagcagtaccaggatgccaccgcagaagaagaggaggatttcggagaggaggca
gaagaggaggcctga

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