Mus pahari (shrew mouse): 110336217
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Entry
110336217 CDS
T05929
Symbol
Ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpah03009
]
110336217 (Ddx49)
Enzymes [BR:
mpah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110336217 (Ddx49)
Ribosome biogenesis [BR:
mpah03009
]
Eukaryotic type
90S particles
Helicases
110336217 (Ddx49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-GeneID:
110336217
NCBI-ProteinID:
XP_021074325
Ensembl:
MGP_PahariEiJ_G0021604
LinkDB
All DBs
Position
19:complement(84955510..84964346)
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AA seq
480 aa
AA seq
DB search
MAGFAEVGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI
LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK
PHVVIATPGRLADHLRSSNTFNMKKIQFLVMDEADRLLEQGCTDFTTDLETILAAIPARR
QTLLFSATLTDTLKELQGLATNKPFFWEAQATVRTVEQLDQRYLLVPEKVKDAYVVHLVQ
TFQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPAVALHSMMKQKERFAALAKFKSSIYR
ILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLL
HAIEEQIKQQLVELVVEEAEVLQILTQVNVVRRECEIKLEASHFDEKKEINKRKQMILEG
KDPDLEAKRKAELAKIKQQNRRFKEKVGQTLRRQKAGSTVRRSRPPRSQPQGPAQAEAQD
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcggggttcgctgaggtcgggttgtcgtcgtggctggtagaacagtgtcgacagctg
gggttgaagcagcccacgccagtgcagctcgggtgcatcccggccatcctggaaggtcgg
gactgcttgggctgtgcaaaaacagggagtggcaagacagcagcctttgtacttcccatc
ttgcagaagctgtctgaggacccttatggaatcttctgcttggttctgacccccaccaga
gagctggcctaccagatcgctgagcagttccgggtgctggggaaacctctgggcctgaag
gactgcatcattgttggcggaatggacatggtggctcaggcgctggagctctctcgcaag
ccacacgtggtgatcgccacccctgggcgcctggctgaccacctgcgcagttccaacact
ttcaacatgaagaaaatccaattcctggtgatggatgaggccgacaggctgctggagcag
ggttgcaccgacttcaccacagacctggagaccatcctggcagccattccagcacgaagg
caaacgctgctgttcagtgccacgctgactgacacactcaaggagctgcagggcctggcc
accaacaagcccttcttttgggaggcacaggccacagtccgcacagtggagcagcttgat
cagcgctatttgttggtaccggagaaggtgaaggacgcctacgtggttcacctggtccag
accttccaggaccagctggaggactgctccatcatcatcttcaccaatacctgcaagacc
tgccagatcctttgcatgatgcttcggaagttcaacttccccgcagtggcactgcactcc
atgatgaagcagaaagagcgctttgcggccctggccaaattcaagtccagcatctatcgg
attcttattgccactgacgtggcctcaaggggcctggacatccccactgtgcaggtagtc
atcaaccacaacacccctgggctccccaagatctacatccatcgggttggtcgcacagcc
cgtgcagggaggcagggacaagccatcacactggtgacgcagtatgacatccacctgttg
catgccatcgaggagcagatcaagcagcagttggtggagctggtggtggaggaggctgag
gttctacaaatcctcacacaggtcaacgtggtgcgaagggagtgcgaaataaaactggag
gcttcgcattttgacgaaaagaaggagatcaacaagcggaaacagatgatcctggagggg
aaggacccggacctggaggccaaacgcaaagctgagctggccaagatcaagcaacaaaac
cggcgcttcaaggagaaagtggggcagacccttcggcgacagaaggcagggagcactgtc
cgacggtcgcgtcctcccagatcgcagccccaagggccagcccaggctgaggctcaggac
tga
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