KEGG   Mus pahari (shrew mouse): 110336313
Entry
110336313         CDS       T05929                                 
Symbol
Cul4a
Name
(RefSeq) cullin-4A
  KO
K10609  cullin 4
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03420  Nucleotide excision repair
mpah04120  Ubiquitin mediated proteolysis
mpah05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110336313 (Cul4a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    110336313 (Cul4a)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    110336313 (Cul4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mpah04121]
    110336313 (Cul4a)
   03400 DNA repair and recombination proteins [BR:mpah03400]
    110336313 (Cul4a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mpah04147]
    110336313 (Cul4a)
Ubiquitin system [BR:mpah04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     110336313 (Cul4a)
DNA repair and recombination proteins [BR:mpah03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      110336313 (Cul4a)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      110336313 (Cul4a)
Exosome [BR:mpah04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   110336313 (Cul4a)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW ADH_zinc_N
Other DBs
NCBI-GeneID: 110336313
NCBI-ProteinID: XP_021074428
Ensembl: MGP_PahariEiJ_G0021296
LinkDB
Position
19:31558236..31601670
AA seq 759 aa
MADEGPRKGSVSALMGRTNGLTKPAALAAGPAKPGGAGGSRKLVIKNFRDRPRLPDNYTQ
DTWRKLHEAVKAIQSSTSIRYNLEELYQAVENLCSHKVSPTLYKQLRQVCEDHVQAQILP
FREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRN
HIISDRMVQSKTIDGILLLIGRERSGEAVDRSLLRSLLSMLSDLQVYKDSFELKFLEETN
CLYAAEGQRLMQDREVPEYLNHVSKRLEEEADRVITYLDHSTQKPLIACVEKQLLGEHLT
AILQKGLEHLLDENRVPDLTQMYQLFSRVKGGQHALLQHWSEYIKTFGTTIVINPEKDKD
MVQDLLDFKDKVDHVVEVCFQRNERFINLMKESFETFINKRPNKPAELIAKHVDSKLRAG
NKEATDEELERILDKIMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLK
HECGAAFTSKLEGMFKDMELSKDIMVHFKQHMQNQSAPGPIDLTVNILTMGYWPTYTPME
VHLPPEMVRLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKADFKEGKKEFQVSLFQTLVLL
MFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKARVLIKSPKGKEVEDGDKFIFNADF
KHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELY
NQLKFPVKPGDLKKRIESLIDRDYMERDKDSPNQYHYVA
NT seq 2280 nt   +upstreamnt  +downstreamnt
atggcggacgagggccctcggaagggcagcgtctcggctctcatgggccgcaccaacggc
ctcaccaagcccgcggcgttggccgctggccccgccaagccggggggcgcgggcggctcc
aggaagctggtcatcaagaacttccgagacaggccgcggctgcctgacaactacactcag
gacacgtggcggaagcttcacgaagcggtcaaggccatccagagcagcacatccatcagg
tacaacctggaggagctgtaccaggctgttgaaaatctttgttctcacaaagtctcccca
acactctacaagcagctacgccaggtctgtgaagatcatgtccaagcccagatcctcccg
ttcagagaagactcactagacagcgttttatttctaaagaagattaacacgtgctggcaa
gatcactgcagacaaatgatcatgatcagaagcatcttcctgtttctggatcgcacctac
gtcctccagaattccatgctgccttctatctgggacatgggcctagagctgtttaggaac
cacatcatcagcgacaggatggtgcagagtaagaccattgatgggatcctgctgctgatt
gggcgtgaacgaagtggagaggctgtggacaggagcctgcttcggagtttgctaagcatg
ctctcagatctccaggtgtacaaagactcatttgagctgaagttcttggaagagactaac
tgcctatacgctgctgaaggccagaggctgatgcaggacagggaggttccagaatacctt
aaccatgtgagcaaacgtttagaagaggaagcagaccgagtgatcacctacttagaccac
agcactcaaaaaccgttgattgcctgtgtggagaaacagctgttaggagaacatttgaca
gcaattctgcagaaagggctggagcacctgctggatgagaacagggtacccgacctgacc
cagatgtaccagctcttcagccgggtgaaaggagggcagcatgcgctgctgcagcactgg
agcgagtacatcaagacctttgggacaaccattgtcatcaatcctgagaaagacaaagac
atggtccaagacctgctggactttaaggacaaagtggaccatgtggtggaggtgtgcttc
cagaggaacgagcgcttcatcaacttgatgaaggaatccttcgagacgttcatcaacaag
agaccaaacaagcctgcagagctcattgccaagcacgtggactcaaagttacgggcaggc
aacaaagaagcaacggacgaggagctggagaggatcctggacaagatcatgattctattc
cgtttcatccatggtaaagatgtctttgaagcattttataagaaagacttagcaaaaagg
ctgttggtggggaagagcgcgtcggtggatgcggagaagtccatgctgtccaagctcaag
cacgagtgtggagctgcatttaccagcaagctggagggcatgttcaaggacatggagctc
tccaaagacatcatggttcacttcaagcagcatatgcagaaccagagtgcaccaggcccc
attgacctcacggtgaacatactcaccatgggctactggcccacatacacacccatggaa
gtgcacctccctccagagatggtcagacttcaggaagtattcaagacgttctacctgggt
aagcacagcggccggaagctgcagtggcagacgacgctgggacacgctgtgctgaaggcg
gactttaaggagggaaagaaggagttccaggtatccctcttccagacgctggtgctgctc
atgttcaacgagggggatggattcagctttgaagaaataaaaatggccactggcatagag
gacagtgagttgcgaagaacactacagtctctcgcctgtggtaaagcacgggtcctaatt
aaaagtcccaaaggaaaggaggtggaagatggagataaattcatcttcaatgcagacttc
aaacacaagttgttcagaataaagatcaatcaaatccagatgaaggagaccgttgaagaa
caggtcagcaccacagagagagtattccaggatagacagtaccagatcgacgctgctata
gtcagaataatgaaaatgaggaagacacttggtcataatctcctagtgtctgaattatac
aatcagctgaaatttccagtgaagcctggagatttgaaaaaaaggatcgagtcacttata
gacagagactatatggaacgagacaaagacagtccaaatcagtaccactacgtggcgtga

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