Mus pahari (shrew mouse): 110336491
Help
Entry
110336491 CDS
T05929
Symbol
Six5
Name
(RefSeq) homeobox protein SIX5
KO
K19474
homeobox protein SIX5
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110336491 (Six5)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
110336491 (Six5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110336491
NCBI-ProteinID:
XP_021074735
Ensembl:
MGP_PahariEiJ_G0021131
LinkDB
All DBs
Position
19:14608213..14612219
Genome browser
AA seq
719 aa
AA seq
DB search
MATSPAERSAGPAARGEAAAAATEEPEEEARQLLQTLQAAEGEAAAAGAGDAAAAADSGS
PSGPGSPRETVTEAPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPV
LRARALVAFQRGEYAELYQLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKY
RLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVS
NWFKNRRQRDRTGTGGGAPCKSESDGNPTTEDESSRSPEDLERGVASVAAEAPAQSSIFL
AGATSPATCPASSPILVNGSFLAAGSPPAVLLNGSPVIINSLALGEGSSLGPLLLTGGGA
PQPQPSLQGVSEAKNSLVLDPQTGEVRLDEAQSEAPETKGVHGATGEEIPGTLSQVVPGP
PPASTFPLTPGAMPAVAAPQVVPLSPSSGYPTGLSPTSPRLNLPQVVPTSQVVTLPQAVG
PLQLLAAGPGSPVKVAAAAGPTNVHLINSSVGVTALQLPSSTAPGNFLLANPVSGSPIVT
GVAVQQGKIILTATFPTSMLVSQVLPPAPSLALPLKQEPAITVPEGALPVGPSPTLPEGH
TLGPVSTQPLPPASVVTSGTSLPFSPDSGLLSSFPAPLPEGLMLSPAAVPVWPAGLELST
GVEGLGTQATHTVLRLPDPDPQGLLLGATTGTEVDEGLEAEAKVLTQLQSVPVEEPLEL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggctacctcgcctgcggagcggagcgcggggcccgcggctcggggggaggcggcggcg
gcggcgaccgaggagccggaggaggaagcgcggcagcttctgcagactctgcaggcagcc
gagggggaggcggcggcggccggggcgggagatgcggcggcggcggcggattctgggtcc
ccgagcggtccggggtctccccgggagaccgtgaccgaggcgcccaccggccttcgcttc
tcgcccgaacaggtggcatgcgtgtgcgaggcgctgctgcaggcgggccacgccggccgc
ctgagccgcttcctgggcgcgctgcccccggccgagcgcctacgtggcagcgatccggtg
ctgcgcgcgcgggccctggtggccttccagcggggcgaatacgccgagctctaccaactt
ctcgagagccgccctttccccgccgcccaccacgccttcctgcaggacctctacctgcgc
gcgcgctaccacgaggccgagcgggcccgtggccgggcgctgggcgcggtggacaaatac
cggctgcgcaagaagttccctctgcccaagaccatctgggatggcgaggagaccgtctat
tgcttcaaggagcgctcgcgagcggcgctcaaggcctgctaccgcggcaaccgctatccc
acgcccgacgagaagcgccgcctggccacgctcaccggcctctcgcttacacaggtcagc
aactggttcaagaaccggcgacagcgcgaccgcactgggaccggcggtggagcgccttgc
aaaagcgagtctgatgggaaccccactaccgaggatgagtccagccgcagtccagaggac
ctggagaggggtgtggcctccgtggctgctgaggcccccgcccagagttccatcttcctg
gcgggggccacctctccggcaacgtgcccggcctcctctccgatcctagtgaatgggagc
ttcctggccgccggcagccccccagcagtgctccttaatggcagccccgtcattatcaat
agcttggccctaggagagggctccagcttggggcccttgttactcacaggaggaggtgcc
cctcaaccacagcccagtctccaaggggtcagtgaggccaagaattctctggtcctggac
cctcagacgggagaggttcgactggatgaggctcagtctgaggcccctgagaccaaaggg
gttcatggggctactggagaggaaatcccaggaaccctgtcccaagtagtcccaggcccc
ccacctgcctccacctttcctctgaccccgggagccatgcccgccgtagctgctcctcag
gttgtcccactctccccttcttctgggtacccaacaggcctgagccccacctccccacgg
ctgaacttgccccaggtggtgcccacctctcaggtggtgaccctgcctcaggctgtgggg
cccctccagctgctggcagctgggccaggcagtcctgtgaaggtggcagctgcagcgggg
cctaccaatgtgcacctgataaactctagtgtgggagtgactgcgctgcaacttccctcg
tccactgctccaggaaacttcctcctggccaaccctgtgtctggcagccccattgtcact
ggggtagctgtgcagcagggcaagatcatcctcactgccaccttccccaccagcatgctc
gtctcccaggtcctgcctcctgcccccagtctagccctgcccctgaagcaagagccagct
atcacagtgcccgaaggagccctcccagtgggccccagccccaccctcccagagggtcac
acactggggccagtctctactcagccactgccacctgcttctgttgtcacctctggcacc
agcctgcccttctccccggactctggcctgctttccagcttcccagcacccctccccgag
ggtctgatgttgtcacctgcagctgtgccagtctggccagcagggctggaactgagcaca
ggagtagaagggctggggacacaggccacccacactgtgctgaggcttccagaccctgac
cctcagggactgcttctgggggctacaacagggactgaggtggatgaggggctagaagct
gaggccaaggtcctgacccagctgcagtcagtacccgtggaggagcccttggaactgtga
DBGET
integrated database retrieval system
