Mus pahari (shrew mouse): 110336494
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Entry
110336494 CDS
T05929
Symbol
Trim28
Name
(RefSeq) transcription intermediary factor 1-beta isoform X1
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mpah01001
]
110336494 (Trim28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110336494 (Trim28)
Enzymes [BR:
mpah01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110336494 (Trim28)
Protein kinases [BR:
mpah01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
110336494 (Trim28)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110336494 (Trim28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
zf-RING_5
PHD
zf-RING_UBOX
zf-C3HC4
zf-B_box_Trim66
PHD_2
zf-RING_2
PHD-1st_NSD
Prok-RING_1
YqxI
YaaC
Motif
Other DBs
NCBI-GeneID:
110336494
NCBI-ProteinID:
XP_021074738
Ensembl:
MGP_PahariEiJ_G0021060
LinkDB
All DBs
Position
19:9841395..9848477
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AA seq
836 aa
AA seq
DB search
MAASAAAATAAASAATAASAASGSPGSGEASAGGEKRPAASSAAAASAAASSPAGGGGEA
QELLEHCGVCRERLRPERDPRLLPCLHSACSACLSPATPAAANNSGDGGSAGDGAMVDCP
VCKQQCYSKDIVENYFMRDSGSKASSDSQDANQCCTSCEDNAPATSYCVECSEPLCETCV
EAHQRVKYTKDHTVRSTGPAKTRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHK
DHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKNTKEVRSSIRQVSDVQKRVQVDVKMA
ILQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNN
TALLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERPGTNST
GPGPMAPPRAPGPLSKQGSGSSQPMEVQEGYGFGSADDPYSSAEPHVSGMKRSRSGEGEV
SGLMRKVPRVSLERLDLDLTSDSQPPVFKVFPGSTTEDYNLIVIERGAAAAAAGQAGTVP
PGAPGAPPLPGMAIVKEEETEAAIGAPPAAPEGPETKPVLMALNEGPGAEGPRLASPSGS
TSSGLEVVAPEVTSAPVSGPGILDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQD
VPGEEWSCSLCHVLPDLKEEDGSLSLDGADSTGVVAKLSPVNQRKCERVLLALFCHEPCR
PLHQLATDSTFSMEQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTED
KADVQSIIGLQRFFETRMNDAFGDTKFSAVLVEPPPLNLPSAGLSSQELSGPGDGP
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcggcggcgactgcagcggcctcggccgcgacggccgcctcagcg
gcctctggtagcccagggtcgggcgaggcctcggcgggcggtgagaagcgtccggccgcc
tcctcagccgcggcggcctcggcagccgcgtcgtcccctgcggggggcggtggcgaggcg
caggagcttctggagcactgcggcgtgtgtcgcgagcgcctgcggcccgaacgggatcct
cggctgctgccctgtctccattcggcctgcagtgcctgcctgagccccgctacacccgcc
gcagcgaataattcgggggatggcggctcggcgggcgacggcgctatggtggattgtcca
gtgtgcaaacagcagtgctactccaaagacatcgtggagaattattttatgcgtgatagt
ggcagtaaggcctcttctgattcccaggatgctaaccagtgctgcactagctgtgaagat
aatgccccagccactagctattgtgtggagtgctctgaaccactttgtgagacctgtgtg
gaggctcaccagcgggtgaaatacaccaaggaccacactgtgcgctccacaggacctgct
aagactcgagatggagaacgaacagtctattgtaatgtgcacaagcatgaaccccttgtg
ctgttttgtgagagctgtgacactctcacttgccgggactgccagctcaacgctcacaag
gaccatcagtaccagtttttggaagatgcagtgaggaaccaacgtaaactcttggcttca
ctggtgaaacgtcttggggacaaacatgccacactgcagaaaaacaccaaggaggttcga
agctcgatccgccaggtgtctgatgtgcagaagcgagtgcaggttgatgtcaagatggcc
attctgcagatcatgaaggagctgaataagcggggtcgagttttggtcaatgatgcccag
aaggtgaccgagggtcagcaggaacgtctggagcgccagcactggaccatgaccaaaatt
cagaagcaccaggaacacattttgcgctttgcctcttgggctttggagagtgataacaat
acagctctcttgctttctaagaagctgatctatttccagctgcatcgggccctcaaaatg
attgtggatcctgtggagcctcatggtgagatgaagtttcagtgggatctcaatgcctgg
accaagagtgctgaagcctttggcaagattgtggctgagcgtcctggtacaaactccaca
ggtcctgggcccatggctcctccaagagccccaggccctctaagcaagcaaggttctggc
agtagccagcccatggaagtacaagagggatatggctttgggtcagcagatgatccctat
tcaagtgcagagccgcatgtatcaggcatgaagcggtcccgctctggtgagggagaggta
agtggcctcatgaggaaggtgccacgtgtgagccttgaacgcctggacctggatctcacc
tctgacagccagccaccagtcttcaaggtctttcctggaagcactactgaggactacaat
ctgattgttattgagcgtggtgctgctgcagcagctgctggtcaggctgggactgtgcca
ccaggagcccctggtgccccacccctgcctggcatggccattgtcaaggaagaagagaca
gaagctgctattggagctcccccggctgcccccgagggtcctgaaaccaagcctgtgttg
atggctctgaatgaaggtcctggtgcagagggacctcgtctagcttcacctagtggaagt
accagctcaggcttagaggtggtggctcctgaggttacctcagccccagtaagtgggcca
ggtatcctggatgacagtgccactatctgccgtgtctgccagaagccaggtgacctggtc
atgtgtaaccagtgcgaattttgctttcaccttgattgccacctcccagccctgcaggat
gttccaggggaggaatggagttgctcactctgccacgtgctccctgacctaaaggaggaa
gatggaagccttagcctggatggagcagatagcactggtgtggtagctaaactctcacca
gtcaaccagcggaaatgtgagcgtgttctgctggccctgttctgccatgaaccatgccgc
cccttgcatcagctggcaaccgactctacattctctatggagcagcctggtggtacccta
gacctgaccttgattcgtgctcgcctccaagagaagctgtcacctccttatagctccccc
caggagtttgctcaagatgtgggccgcatgttcaaacagttcaataagctgactgaggac
aaggcagatgttcagtccatcatcggcctgcagcgcttctttgagacacgcatgaatgat
gcctttggagacaccaagttttctgctgtgctggtagaaccgccaccattgaaccttccc
agtgctggcctaagttctcaggagctctctggccctggtgatggtccctga
DBGET
integrated database retrieval system
