Mus pahari (shrew mouse): 110336530
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Entry
110336530 CDS
T05929
Symbol
Colgalt1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah00310
Lysine degradation
mpah00514
Other types of O-glycan biosynthesis
mpah01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
110336530 (Colgalt1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
110336530 (Colgalt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mpah01003
]
110336530 (Colgalt1)
Enzymes [BR:
mpah01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
110336530 (Colgalt1)
Glycosyltransferases [BR:
mpah01003
]
O-Glycan biosynthesis
O-linked Gal type
110336530 (Colgalt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
110336530
NCBI-ProteinID:
XP_021074792
Ensembl:
MGP_PahariEiJ_G0021662
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All DBs
Position
19:86359969..86373864
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AA seq
620 aa
AA seq
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MAALPRESRGLPLLPLLPLLLLLPPLGGPRGASGYFPEERWSPESPLQAPRVLIALLARN
AAPALPATLGALEQLRHPRERTALWVATDHNTDNTSAILREWLVAVKGLYHSVEWRPAEE
PSSYPDEEGPKHWSDSRYEHVMKLRQAALKSARDMWADYILFIDSDNLITNPDTLSLLIA
ENKTVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFLIDL
RKAASRNLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNKEVYGFLPVPLRAHSSLQ
DEAESFMHVQLEVMVKHPPVQLSRFISAPRKTADKMGFDEVFMINLKRRRDRRERMLRAL
HEQEIECQLVEAVDGKAMNTSQVEAMGIQMLPGYRDPYHGRPLTKGELGCFLSHYNIWKE
VVDRGLQKSLVFEDDLRFEIFFKRRLMNLMRDVEREGLDWDLIYVGRKRMQVEHPEKAVP
RVRNLVEADYSYWTLAYVISLQGAQKLLAAKPLAKMLPVDEFLPVMFDKHPMSEYKSHFS
PRNLRAFSVEPLLIYPTHYTGDDGYVSDTETSVVWNNEQVKTDWDRAKSQKMREQQALSR
EAKNSDVLQSPLDSTARDEL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttgccacgcgagtcacgcgggctgccgctgctgccgctgctgccgctgctc
ctactgctgccgccgctgggcggcccgcgcggcgcgtccggctacttcccagaggagcgc
tggagccccgagtccccgctacaggcgccgcgcgtgctcatcgcgctgctggcgcggaac
gcggcacccgcgctgcccgccacactgggcgccctggagcagctgcgccacccacgggag
cgcacggcgctgtgggtggccacagatcacaacactgacaacacttcagccatacttcga
gagtggctggtggcagtgaagggtttgtaccactctgtggagtggcgaccggcagaggaa
cccagctcctacccagacgaagagggccccaaacactggtctgattctcgctacgagcat
gtcatgaaactgcgccaagcagccttgaagtcagctagggacatgtgggctgactacatt
ctgttcatagacagcgacaacttgatcaccaaccccgacactctgagcctgctcatcgct
gagaacaagacagtggtggcccccatgctggactcccgagcggcatactccaacttctgg
tgtgggatgacttcgcagggctactacaagcgcacccctgcctatatccccatccgaaaa
cgagaccgcaggggctgctttgcagttcccatggtgcactctaccttcctcattgacctg
cgtaaggctgcatccaggaacctggccttttacccaccgcacccagactacacctggtct
tttgacgacatcatcgtcttcgccttctcctgtaaacaggcagaggtgcaaatgtacgtg
tgcaataaggaggtgtacggcttcctgcctgttccactgcgtgcgcacagcagcttgcag
gacgaagcagagagcttcatgcacgtgcagctggaggtcatggtgaagcatccaccagta
cagctctcccgattcatctcagcacccaggaagactgctgacaagatgggcttcgatgag
gtcttcatgatcaacctgaagcggaggcgggaccggcgagaacgcatgctgcgggcactg
catgagcaggagattgaatgccagctggtagaggctgtagatggcaaagccatgaacacc
agccaggtggaggccatgggcatccaaatgctacctggctaccgggacccctaccatggg
cggccgctcaccaagggagagctgggctgctttctcagccactacaacatctggaaggag
gtggttgaccggggactacagaaatcactagtgtttgaggatgatctgcgttttgagatc
ttcttcaagagacgtctgatgaacctcatgcgggatgtggagcgtgaggggctggactgg
gacctcatatacgtgggccggaagcgcatgcaggtggagcatcctgaaaaggctgtgccc
cgtgtaaggaacctggtggaggctgattattcctactggacgctagcctatgtaatctcc
ctgcaaggtgctcagaagttgcttgctgccaagccactggctaaaatgctacctgttgat
gagtttctgcctgtcatgtttgacaagcacccaatgtcagaatacaagagtcacttctct
ccccgcaacctgcgtgccttctctgtggagcccctccttatctaccctacacactacaca
ggggatgatggctatgtaagtgacacagagacctcagttgtgtggaataatgagcaagtt
aagactgactgggaccgagccaagtcccagaagatgcgggaacagcaagcactgagccgt
gaggccaagaactcagatgtgctccagtctccactggacagtactgcccgtgatgagctt
taa
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