Mus pahari (shrew mouse): 110336568
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Entry
110336568 CDS
T05929
Symbol
Wrn
Name
(RefSeq) Werner syndrome ATP-dependent helicase
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpah03032
]
110336568 (Wrn)
03400 DNA repair and recombination proteins [BR:
mpah03400
]
110336568 (Wrn)
Enzymes [BR:
mpah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110336568 (Wrn)
DNA replication proteins [BR:
mpah03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
110336568 (Wrn)
DNA repair and recombination proteins [BR:
mpah03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
110336568 (Wrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
110336568
NCBI-ProteinID:
XP_021074862
Ensembl:
MGP_PahariEiJ_G0021430
LinkDB
All DBs
Position
19:complement(50440036..50571369)
Genome browser
AA seq
1401 aa
AA seq
DB search
METTSLQRKFPEWMSMQNRRCATEEKACVQKSVLEDNLPFLEFPGSIVYSYEASDCSFLS
EDICMRLSDGDVVGFDMEWPPIYKPGKRSRVAVIQLCVSESKCYLFHISSMSVFPQGLKM
LLENKSIKKAGVGIEGDQWKLLRDFDVKLESFVELTDVANERLKCAETWSLNGLVKHVLG
KQLLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGLIIYQKLGNLGDTAQVFALNKAEENL
PLEMKKQLNSISEEMRDLADRFPVTCRNLETLQRVPVILKSISENLCSLRKVICGPTNIE
IRPKPGSSFNLLSSEDSAAVGEKETQIGEQSTFAKIKEEPWDPELDSLVKQEEVDVFRNQ
VKQEKGESENEVEDNLLREDMERTFLMPSISEYELQDLEQQAKEENYNDVSHQFSEHLST
IDDENDSSYIIESDEDLEMEMLKSLENLNSDVVEPTHSKWLEMGSNGRLPPEEEAGDRNE
AIKVEQEEEDHLLPEPNAKQINCLKTYFGHSSFKPVQWKVIHSVLEERRDNVVVMATGYG
KSLCFQYPPVYTGKIGIVISPLISLMEDQVLQLELSNVPACLLGSAQSKNILGDIKLGKY
RIIYITPEFCSGNLDLLQQLDSSIGITLLAVDEAHCISEWGHDFRSSFRTLGSIKTALPL
VPVIALSATASSSIREDIISCLNLKDPQITCTGFDRPNLYLEVGRKTGNILQDLKPFLVR
KASSAWEFEGPTIIYCPSRKITEQVTAELGKLNLACRTYHAGMKINERKDIHHSFLRDEI
QCVVATVAFGMGINKADIRKVIHYGAPKEMESYYQEIGRAGRDGLPSSCHLLWAPADFNT
SRSHLNEIHNEKFRLYKLKMMVKMEKYLHSSQCRRQIILSHFEDKCLQKASLDIMGTEKC
CDNCRPRLNHCLTANNSEDTSQDFGPQAFQLLSAVDVLQEKFGIGIPILFLRGSNSQRLP
DNYRGHRLFGAGKEQAESWWKALSHHLIAEGFLVEVPKQNKFIKTCSLTKKGRKWLGEAS
LQSPPSLLLQASEEVLPRKVLLPSSNPVASEMMQHSSNQNPAGLTTEQSNSERTYSYKVP
EKFSSGTNIPKKSAVIPSSGTSSSSSEPAISAQELDARTALYARLVEARQKHANKMDVPP
AILATNKVLLDMARMRPTTVENMKQIDGVSEGKAALLAPLLEVIKQFCQVNSVQTDLLSS
AKPHKEQEKSQEMEKKDCSLPQSAAVTYTLFQEKKMSLHSIAENRLLPLTAVGMHLAQAV
KAGYPLDMERAGLTPEARKIITDVIRNPPINSDMYKVKLIRMLVPENIDTYLIHMVIEIL
ESGSNSRTQPPCDSNRKRCFPSSAESCGSFKKSKEVVTETKASSVVSKRKLPEWFAKGNV
PSADAGSSSSMAKTKKKGLFS
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccacttcattgcagcggaaatttccagaatggatgtctatgcagaatagaaga
tgtgctacagaagaaaaggcatgtgtccagaagagtgttcttgaagataacctcccattc
ttagaattccctggatctatcgtgtacagttatgaagctagtgattgttcattcctgtct
gaagacatttgcatgcgtctgtctgatggcgatgtggtgggatttgacatggaatggccg
cccatatacaagccagggaaacgaagcagagtcgcagtgatccagttgtgtgtgtctgag
agcaaatgttacttgtttcacatttcttccatgtcagttttcccccagggattaaaaatg
ttactggaaaacaaatcaattaagaaggcaggtgtggggattgaaggggaccagtggaaa
cttctgcgtgattttgatgtcaagttggagagttttgtggagctgacagatgttgccaat
gaaaggttgaagtgcgcagagacctggagcctcaatggtctggttaaacatgtcttaggg
aaacaacttttgaaagacaagtccatccgctgcagcaattggagtaatttccccctcact
gaggaccagaaactgtacgcagctactgatgcttatgctggtctcatcatctatcaaaaa
ttaggaaatttgggtgatactgcacaagtgtttgctctaaataaagcagaggaaaaccta
cccctggagatgaagaaacagttgaattcaatctctgaagaaatgagggatctagccgac
cgttttcctgtcacttgcagaaatttggaaactctacagagggttcctgtaatattgaag
agtatttcagaaaatctctgttctttgagaaaggtgatctgtggtcctacaaacattgag
attagaccgaagccaggcagtagttttaatttactgtcatcagaggattcagctgctgtt
ggagaaaaagagacacagattggagaacaaagtacttttgctaaaattaaagaagaacca
tgggacccagaacttgacagtttagtgaagcaagaggaggttgatgtatttagaaatcaa
gtgaagcaagaaaaaggtgaatctgaaaatgaagtagaagacaatctgttgagagaagat
atggaaagaacttttttgatgcctagtatttcagaatatgaactccaagatttggaacag
caagctaaagaagaaaattataatgatgtttctcaccaattttctgagcatttatctacc
attgatgatgaaaatgactcctcctatataattgaaagtgatgaagatttagaaatggag
atgctgaagtctttagaaaacctaaatagtgacgtggtggaacctactcactctaaatgg
ttggaaatgggaagcaatgggcgtcttcctcctgaggaggaagctggagacagaaatgaa
gccatcaaagtggagcaggaagaagaggaccatttattgccggaaccaaacgcaaagcaa
attaattgcctcaagacctatttcggacacagcagttttaaaccggttcagtggaaagtc
atccattctgtattagaagaaagaagagataatgttgttgtcatggcaactggatatggg
aagagtctgtgcttccagtatccgcctgtttatacgggcaagattggcattgtcatttca
cctctcatttccctaatggaagaccaggtcctccagcttgaactgtccaatgttccagcc
tgtttacttggatctgcacaatcaaaaaatattctaggagatattaaattaggtaaatat
aggatcatctacataactccagagttctgttctggtaacttggacctactccagcaactt
gactctagtattggcatcacgctccttgctgtggatgaggctcactgcatttcagagtgg
ggccatgattttagaagttcattcaggacgctgggctccattaaaacagcactcccattg
gttccagtcattgcactctccgctactgcaagctcttcgatccgggaagacattataagc
tgcttaaacttgaaagaccctcagatcacctgcactggatttgatcggccaaatctatac
ttagaagttggacgaaaaacagggaacatccttcaggatctaaaaccatttctcgtccga
aaggcaagttctgcctgggaattcgaaggtccaaccatcatctattgtccttcaagaaaa
attacagagcaagttactgctgaacttgggaaactgaacttagcctgtagaacataccac
gccggcatgaaaattaacgaaaggaaggacattcatcatagcttcctgagagatgaaatt
cagtgtgtcgtagctactgttgcttttggaatgggcattaataaagctgacattcgcaaa
gttattcattatggtgcccctaaggaaatggaatcctattaccaggaaattggtagagct
ggccgggatggacttccgagttcctgtcacttgctatgggctccagcagattttaacaca
tccaggagtcaccttaatgagattcacaatgaaaagttccggttatataaattaaagatg
atggtaaagatggaaaaataccttcattccagtcagtgtaggcgacaaatcatcttgtcc
cattttgaggacaaatgtctacagaaggcctccttggacattatgggaacagaaaaatgc
tgtgataattgcaggcccagactgaatcattgccttactgctaacaactcagaggacaca
tcccaagactttgggccacaagcattccagctactgtctgctgtggacgtcctgcaggag
aaatttggaattgggattccgattttatttctccgaggatctaattctcagcgtcttcct
gataactatcgtggtcacaggctctttggtgctggaaaggagcaagcagagagttggtgg
aaggccctttctcaccatctcatagctgaaggattcttggtagaagttcccaagcaaaac
aaatttataaagacttgttcccttacaaaaaagggtagaaagtggcttggtgaagccagt
ctgcagtctcctcccagccttctccttcaagctagtgaagaggtgcttccgaggaaggtt
ctgctaccaagttctaatcctgtagcttcagaaatgatgcagcattcctctaatcaaaac
ccagctggattaactaccgagcagtctaattcggagagaacgtattcttacaaagtgcct
gagaaattttcttctgggactaacattcctaaaaaaagtgccgtgataccgtcatcagga
acatcttccagctcctcagaacctgccatttcagcccaagagctggacgctcggactgcg
ttatatgccaggttggtggaagcaaggcagaaacacgctaataagatggatgtacctcca
gctattttagcaacaaacaaggttctgctggacatggccagaatgagaccgacgactgtt
gaaaacatgaaacagatcgacggtgtctctgaaggcaaagctgctctgttggcccctctg
ttggaagtcatcaaacagttctgtcaagtaaatagtgttcagacagacctcctttccagt
gccaaacctcacaaggaacaggagaaaagtcaggagatggaaaagaaagactgctcactc
ccccagtctgcggccgtcacgtacactctattccaggaaaagaaaatgtccttacacagc
atagctgagaacagacttctgcctctcacagcagtcggcatgcacttagcccaggcggtg
aaagccggctaccctctggatatggagcgagccggcctgaccccagaggctcggaagatt
attacggatgttatccgaaaccctcccatcaactcagatatgtataaagttaaactcatc
agaatgttagttcctgaaaatattgacacatacctcatccacatggtgattgagatcctt
gagagcggttccaacagcagaacccagcctccctgtgattccaacaggaagaggtgtttc
cccagctctgcagagagttgtgggagctttaagaagagcaaagaggtggtcaccgagacc
aaggcatcatctgtagtatcaaagagaaaattacctgagtggtttgccaaaggaaatgtg
ccctcagctgatgccggcagctcatcatcaatggccaagaccaaaaagaaaggtctcttt
agttaa
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