Mus pahari (shrew mouse): 110336598
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Entry
110336598 CDS
T05929
Symbol
Smg9
Name
(RefSeq) protein SMG9
KO
K18735
protein SMG9
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110336598 (Smg9)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
110336598 (Smg9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
AAA_30
DUF6079
Motif
Other DBs
NCBI-GeneID:
110336598
NCBI-ProteinID:
XP_021074918
Ensembl:
MGP_PahariEiJ_G0021184
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All DBs
Position
19:19914476..19937175
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AA seq
520 aa
AA seq
DB search
MSESGHSQPGLYGIERRRRWKEPGSSGPQNLSGPGGRERDYIAPWERERRDGSEDPSTNV
MQKTPIILSKPPAERSKQPPPSTAPAAPPAPAPLEKPIVLMKPREEGKGPVAGTGASTPE
GTAPPPPTAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPTAMDPVVGQAKLLPPERMKHS
IKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANSPEEDQRAYVFRA
QSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYV
EMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHETSSSAGSDEG
TEYYPHLVFLQNKARREDFCPRKLRQMHLMIDQLMAHSHLRYKGTLSMLQCNVFPGLPPD
FLDAEVNLFLVPFMDSEAENENPPRAGPGSSPLFSLLPGYRGHPSFQSLVSKLRSQVMSM
ARPQLSHTILTEKNWFHYAARIWDGVKKSSALAEYSRLLA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtctgggcacagtcagcctgggctctatgggatagagcggcggcggcggtgg
aaagagccaggctctagtggcccccagaatctttctgggcctggtggtcgggagagagac
tacattgccccctgggaaagagagagacgggatggcagcgaggaccccagcactaacgtc
atgcagaaaacccccatcatcctctcaaagcccccagctgagcggtcaaagcagccgcca
cctagtacagcgccagctgctccaccagccccagcccccctggagaaacccattgtgctc
atgaagccacgtgaggaggggaaggggcctgtggctggaacaggggcttccacccctgaa
ggtactgcgccaccaccccccacggcccctgcaccacccaagggagagaaggaggggcag
agacccacacagcccgtgtaccagattcaaaaccggggcatgggcactgctgccccaact
gccatggaccctgtggtgggccaggctaagctcctgcccccagagcgcatgaagcacagc
atcaagctggtagacgaccagatgaactggtgtgacagcgccattgagtacctgctggat
cagacggacgtgttagtggtcggtgtcttaggcctccaggggacaggcaagtccatggtc
atgtcactgctgtctgcaaactccccagaggaagaccagagagcgtatgtcttccgggct
cagagtgcggagatgaaggaacgagggggcaatcagacgagcggcattgacttcttcatt
acccaagagcgcattgtcttcctagacacacagcccatcctcagcccatccatcttggac
cacctcatcaataacgaccgcaaactgcctccagagtataacctccctcacacctatgtg
gagatgcagtccctgcagatagctgccttcctcttcaccgtctgccacgtggtgatcgtc
gtgcaggattggttcacggacctcagtctgtacaggttcctgcaaacggcagagatggtg
aagccatccaccccgtctcccagccacgagaccagcagctcggcaggctcggacgagggc
accgagtactacccccacctggtcttcctgcagaacaaggcacgtagggaggacttctgt
ccccggaaattacgacagatgcacctgatgattgaccagctcatggcgcactcccacctg
cgctacaaggggacactgtccatgctacagtgcaacgtcttcccagggctgccacccgac
ttcctggatgctgaggtcaacttgttcctggtgcccttcatggacagtgaagctgagaac
gagaacccacctagagcagggcctggctccagccccctcttttccctgctgcctgggtac
cgaggtcaccccagcttccagtccttggtcagtaagctccgcagccaggtgatgtctatg
gctcggccacagctgtcacacacgatcctcactgaaaagaattggttccactacgctgcc
cgaatctgggatggggtgaagaagtcctcagccctggcagagtacagccgcctgctggcc
tga
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